BLASTX nr result
ID: Rehmannia23_contig00018519
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018519
(581 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp... 100 4e-19
emb|CBI27903.3| unnamed protein product [Vitis vinifera] 100 4e-19
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp... 91 2e-16
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp... 91 2e-16
ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Ar... 88 1e-15
gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative i... 87 2e-15
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm... 86 5e-15
gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus pe... 86 7e-15
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat... 86 9e-15
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu... 86 9e-15
gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao] 85 1e-14
tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea m... 85 2e-14
ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron sp... 84 2e-14
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp... 84 2e-14
tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays] 84 2e-14
ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|... 84 2e-14
emb|CAB45335.1| putative protein [Arabidopsis thaliana] gi|72698... 84 2e-14
ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [A... 84 3e-14
gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative i... 84 3e-14
gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative i... 84 3e-14
>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Vitis vinifera]
Length = 884
Score = 100 bits (248), Expect = 4e-19
Identities = 58/105 (55%), Positives = 65/105 (61%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVLVSV+RTPKGY IIVYRGKNYQRP A RP+NLLTKRQALARSIELQR EA
Sbjct: 752 GVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDL 811
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLEMDE 265
E+M + N D + R +S DED+E DE
Sbjct: 812 EERIKLLKSLPEEMKTGNGIDDKAFYSRLDGT--YSTDEDMEEDE 854
>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
Length = 881
Score = 100 bits (248), Expect = 4e-19
Identities = 58/105 (55%), Positives = 65/105 (61%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVLVSV+RTPKGY IIVYRGKNYQRP A RP+NLLTKRQALARSIELQR EA
Sbjct: 749 GVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQALARSIELQRHEALKHHISDL 808
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLEMDE 265
E+M + N D + R +S DED+E DE
Sbjct: 809 EERIKLLKSLPEEMKTGNGIDDKAFYSRLDGT--YSTDEDMEEDE 851
>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
group IIA intron splicing facilitator CRS1,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 820
Score = 91.3 bits (225), Expect = 2e-16
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVS+++T +GY II+YRGKNYQRP FRP+NLLTKRQALARSIELQRREA
Sbjct: 713 GLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITAL 772
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDED 280
ED D ETL R D SDDED
Sbjct: 773 QDKIQNLKSELEDTNMVEEIDEETLFSR----LDASDDED 808
>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum lycopersicum]
Length = 812
Score = 91.3 bits (225), Expect = 2e-16
Identities = 54/100 (54%), Positives = 61/100 (61%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVS+++T +GY II+YRGKNYQRP FRP+NLLTKRQALARSIELQRREA
Sbjct: 705 GLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQALARSIELQRREALKHHITEL 764
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDED 280
ED D ETL R D SDDED
Sbjct: 765 QDKIQNLKSELEDTEMVEEIDEETLFSR----LDASDDED 800
>ref|NP_194704.2| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|332660271|gb|AEE85671.1| CRS1 / YhbY (CRM)
domain-containing protein [Arabidopsis thaliana]
Length = 841
Score = 88.2 bits (217), Expect = 1e-15
Identities = 54/109 (49%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVLVSV++T KGY II+YRGKNYQ P RP NLLT+++A ARSIELQRREA
Sbjct: 716 GVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADL 775
Query: 399 XXXXXXXXXXXEDMMSPNN---DDAETLDLRTSAACDFSDDEDLEMDEW 262
+D M N ++ E L LR + DFS DED E EW
Sbjct: 776 EERIELLKTGQDDDMETRNKSDEEEENLYLRVDES-DFSSDED-ESLEW 822
>gb|EOY30431.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
domain-containing protein, putative isoform 1 [Theobroma
cacao]
Length = 873
Score = 87.4 bits (215), Expect = 2e-15
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREALKHHVLDL 806
Query: 399 XXXXXXXXXXXEDMMSPNNDDAE-TLDLRTSAACDFSDDEDLEMDEWSD 256
E+M + D + T R + A F DED+E EW +
Sbjct: 807 QEKIELMKSELEEMKTGKEIDVDKTSYSRLNKAPLF--DEDIEEGEWEE 853
>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
gi|223546576|gb|EEF48074.1| conserved hypothetical
protein [Ricinus communis]
Length = 930
Score = 86.3 bits (212), Expect = 5e-15
Identities = 52/105 (49%), Positives = 60/105 (57%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVLVS+ERT KGY IIVYRGKNY P RP+NLLTKRQAL RSIELQRREA
Sbjct: 811 GVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKRQALVRSIELQRREALKHHISDL 870
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLEMDE 265
EDM S D + + S+ D S D +++E
Sbjct: 871 QERIELLKLELEDMESGKEIDVD----KMSSRLDDSSISDSDVEE 911
>gb|EMJ04994.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
Length = 906
Score = 85.9 bits (211), Expect = 7e-15
Identities = 41/52 (78%), Positives = 47/52 (90%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVLVS+++T KGY II+YRGKNYQ PL RPRNLLT+RQALARS+ELQRREA
Sbjct: 777 GVLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSVELQRREA 828
>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 859
Score = 85.5 bits (210), Expect = 9e-15
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVLVS+++T KGY I+VYRGKNYQ PL RP+NLLT+RQALARS+ELQRREA
Sbjct: 732 GVLVSIDKTIKGYAILVYRGKNYQSPLKIRPQNLLTRRQALARSVELQRREA 783
>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
gi|550336383|gb|EEE92740.2| hypothetical protein
POPTR_0006s15340g [Populus trichocarpa]
Length = 977
Score = 85.5 bits (210), Expect = 9e-15
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVLVSV+RT KGY IIVYRGKNY RP A RP NLLT+RQALARS+ELQR EA
Sbjct: 849 GVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQALARSVELQRYEA 900
>gb|EOY05900.1| CRM family member 3A isoform 1 [Theobroma cacao]
Length = 876
Score = 85.1 bits (209), Expect = 1e-14
Identities = 42/52 (80%), Positives = 46/52 (88%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVLVSV+R KGY IIVYRGK+YQRP RP+NLLTKR+ALARSIELQRREA
Sbjct: 725 GVLVSVDRISKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRREA 776
>tpg|DAA61175.1| TPA: hypothetical protein ZEAMMB73_652631 [Zea mays]
Length = 964
Score = 84.7 bits (208), Expect = 2e-14
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVL+S+++T KGYVII YRGKNY+RP +PRNLLT+RQALARSIELQRREA
Sbjct: 837 GVLISLDKTTKGYVIIFYRGKNYRRPQIMKPRNLLTRRQALARSIELQRREA 888
>ref|XP_004956664.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Setaria italica]
Length = 963
Score = 84.3 bits (207), Expect = 2e-14
Identities = 50/102 (49%), Positives = 60/102 (58%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVL+SV++T KGY II YRGKNY+RP +PRNLLT+RQALARSIELQRREA
Sbjct: 836 GVLISVDKTTKGYAIIFYRGKNYRRPQIVKPRNLLTRRQALARSIELQRREALKHHISSL 895
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLE 274
M + L L+T A SDD+D+E
Sbjct: 896 QGKIWKLNTQLVQMKEAMEKEDVKL-LQTVEADLSSDDDDVE 936
>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 933
Score = 84.3 bits (207), Expect = 2e-14
Identities = 51/106 (48%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVS+++T KGY II+YRGKNYQ PL RPRNLLT+RQALARSIELQRRE
Sbjct: 805 GLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQALARSIELQRREGLKHHLSDL 864
Query: 399 XXXXXXXXXXXEDMMSPNN-DDAETLDLRTSAACDFSDDEDLEMDE 265
E+M + DD TL + SD+E+ E +E
Sbjct: 865 QERIELLKTELEEMENGRMVDDGRTLHSSLDDSLFSSDNEEDEGEE 910
>tpg|DAA42235.1| TPA: CRM family member 3 [Zea mays]
Length = 1523
Score = 84.3 bits (207), Expect = 2e-14
Identities = 48/109 (44%), Positives = 62/109 (56%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVSV++ KGY I+V+RGKNY+RP + RPRNLL+KR+ALARSIELQR +A
Sbjct: 1334 GILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKL 1393
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLEMDEWSDY 253
M E L + AA SDDED+E ++ Y
Sbjct: 1394 NRKVERLKAELVQMEDVKEQGDEELYAKLDAAYS-SDDEDMEDEDDEAY 1441
>ref|NP_001106061.1| CRM family member 3 [Zea mays] gi|156789080|gb|ABU96081.1| CRM
family member 3 [Zea mays]
Length = 842
Score = 84.3 bits (207), Expect = 2e-14
Identities = 48/109 (44%), Positives = 62/109 (56%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
G+LVSV++ KGY I+V+RGKNY+RP + RPRNLL+KR+ALARSIELQR +A
Sbjct: 653 GILVSVDKVSKGYAIVVFRGKNYRRPSSLRPRNLLSKRKALARSIELQRHQALSRHFAKL 712
Query: 399 XXXXXXXXXXXEDMMSPNNDDAETLDLRTSAACDFSDDEDLEMDEWSDY 253
M E L + AA SDDED+E ++ Y
Sbjct: 713 NRKVERLKAELVQMEDVKEQGDEELYAKLDAAYS-SDDEDMEDEDDEAY 760
>emb|CAB45335.1| putative protein [Arabidopsis thaliana] gi|7269874|emb|CAB79733.1|
putative protein [Arabidopsis thaliana]
Length = 776
Score = 84.3 bits (207), Expect = 2e-14
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREAXXXXXXXX 400
GVLVSV++T KGY II+YRGKNYQ P RP NLLT+++A ARSIELQRREA
Sbjct: 674 GVLVSVDKTMKGYAIILYRGKNYQMPFRLRPSNLLTRKKAFARSIELQRREALKYHVADL 733
Query: 399 XXXXXXXXXXXEDMMSPNN---DDAETLDLRTSAACDFSDDE 283
+D M N ++ E L LR + DFS DE
Sbjct: 734 EERIELLKTGQDDDMETRNKSDEEEENLYLRVDES-DFSSDE 774
>ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [Amborella trichopoda]
gi|548842074|gb|ERN02031.1| hypothetical protein
AMTR_s00045p00114550 [Amborella trichopoda]
Length = 1059
Score = 84.0 bits (206), Expect = 3e-14
Identities = 40/52 (76%), Positives = 46/52 (88%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
GVL+SV++T KGY II+YRGKNYQRP RP NLLTKR+ALARS+ELQRREA
Sbjct: 954 GVLISVDKTTKGYAIILYRGKNYQRPSMVRPGNLLTKRKALARSVELQRREA 1005
>gb|EOY30435.1| CRS1 / YhbY domain-containing protein, putative isoform 5
[Theobroma cacao] gi|508783180|gb|EOY30436.1| CRS1 /
YhbY domain-containing protein, putative isoform 5
[Theobroma cacao]
Length = 822
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREA 798
>gb|EOY30434.1| CRS1 / YhbY domain-containing protein, putative isoform 4
[Theobroma cacao]
Length = 818
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/52 (73%), Positives = 46/52 (88%)
Frame = -3
Query: 579 GVLVSVERTPKGYVIIVYRGKNYQRPLAFRPRNLLTKRQALARSIELQRREA 424
G+LVS+++T KGY II+YRGKNY RP RP+NLLT+RQALARS+ELQRREA
Sbjct: 747 GLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQALARSVELQRREA 798