BLASTX nr result
ID: Rehmannia23_contig00018385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00018385
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 106 4e-21
ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301... 105 6e-21
gb|EMJ20187.1| hypothetical protein PRUPE_ppa004001mg [Prunus pe... 103 2e-20
ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250... 103 3e-20
emb|CBI33920.3| unnamed protein product [Vitis vinifera] 103 3e-20
emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera] 103 3e-20
ref|XP_004155748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 101 9e-20
ref|XP_004148916.1| PREDICTED: uncharacterized protein LOC101209... 101 9e-20
ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A-like isof... 100 2e-19
ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A-like isof... 100 2e-19
ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A-like isof... 100 2e-19
ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A-like isof... 100 2e-19
ref|XP_004245861.1| PREDICTED: RNA-binding protein 5-like [Solan... 100 2e-19
ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Popu... 100 3e-19
ref|XP_002337704.1| predicted protein [Populus trichocarpa] 100 3e-19
ref|XP_002327561.1| predicted protein [Populus trichocarpa] 99 8e-19
ref|XP_006372488.1| zinc finger family protein [Populus trichoca... 97 2e-18
ref|XP_006430373.1| hypothetical protein CICLE_v10010959mg [Citr... 92 5e-17
ref|XP_006430372.1| hypothetical protein CICLE_v10010959mg [Citr... 92 5e-17
ref|XP_006430370.1| hypothetical protein CICLE_v10010959mg [Citr... 92 5e-17
>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
[Ricinus communis]
Length = 962
Score = 106 bits (264), Expect = 4e-21
Identities = 51/62 (82%), Positives = 55/62 (88%), Gaps = 2/62 (3%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDAT--TQSYEVITADKAIDESNVGNRMLRNMGWH 242
RD F++G LDSMPFPPGVGGGR GDA+ TQSYEVITADKAIDESNVGNRMLR+MGWH
Sbjct: 838 RDLPFKKGSLDSMPFPPGVGGGRGAGDASINTQSYEVITADKAIDESNVGNRMLRSMGWH 897
Query: 241 EG 236
EG
Sbjct: 898 EG 899
>ref|XP_004306470.1| PREDICTED: uncharacterized protein LOC101301612 [Fragaria vesca
subsp. vesca]
Length = 1062
Score = 105 bits (262), Expect = 6e-21
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD R+G DSMPFPPGVGGGR+TGDA SYEVITADKAIDESNVGN+MLR+MGWHEG
Sbjct: 943 RDLALRKGSFDSMPFPPGVGGGRATGDAAIDSYEVITADKAIDESNVGNKMLRSMGWHEG 1002
>gb|EMJ20187.1| hypothetical protein PRUPE_ppa004001mg [Prunus persica]
Length = 536
Score = 103 bits (258), Expect = 2e-20
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD R+G DSMPFPPGVGGGR+ GDA SYEVITA+KAIDESNVGN+MLRNMGWHEG
Sbjct: 417 RDSASRKGSFDSMPFPPGVGGGRAVGDANIDSYEVITAEKAIDESNVGNKMLRNMGWHEG 476
>ref|XP_002278861.2| PREDICTED: uncharacterized protein LOC100250662 [Vitis vinifera]
Length = 1105
Score = 103 bits (256), Expect = 3e-20
Identities = 50/63 (79%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDAT--TQSYEVITADKAIDESNVGNRMLRNMGWH 242
RD F++G LDSMPFPPGVGGGR GDA QSYEVITADKAIDESNVGNRMLR+MGW
Sbjct: 984 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1043
Query: 241 EGS 233
EGS
Sbjct: 1044 EGS 1046
>emb|CBI33920.3| unnamed protein product [Vitis vinifera]
Length = 1029
Score = 103 bits (256), Expect = 3e-20
Identities = 50/63 (79%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDAT--TQSYEVITADKAIDESNVGNRMLRNMGWH 242
RD F++G LDSMPFPPGVGGGR GDA QSYEVITADKAIDESNVGNRMLR+MGW
Sbjct: 908 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 967
Query: 241 EGS 233
EGS
Sbjct: 968 EGS 970
>emb|CAN76782.1| hypothetical protein VITISV_013474 [Vitis vinifera]
Length = 1070
Score = 103 bits (256), Expect = 3e-20
Identities = 50/63 (79%), Positives = 53/63 (84%), Gaps = 2/63 (3%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDAT--TQSYEVITADKAIDESNVGNRMLRNMGWH 242
RD F++G LDSMPFPPGVGGGR GDA QSYEVITADKAIDESNVGNRMLR+MGW
Sbjct: 949 RDSAFKKGSLDSMPFPPGVGGGRGMGDANGNVQSYEVITADKAIDESNVGNRMLRSMGWQ 1008
Query: 241 EGS 233
EGS
Sbjct: 1009 EGS 1011
>ref|XP_004155748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209801
[Cucumis sativus]
Length = 464
Score = 101 bits (252), Expect = 9e-20
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD + ++G LD+MPFPPGVGGGR +GDA ++EVITAD+AIDE+NVGNRMLRNMGWHEG
Sbjct: 345 RDISVKKGSLDAMPFPPGVGGGRVSGDANLNTFEVITADRAIDENNVGNRMLRNMGWHEG 404
Query: 235 S 233
S
Sbjct: 405 S 405
>ref|XP_004148916.1| PREDICTED: uncharacterized protein LOC101209801 [Cucumis sativus]
Length = 1048
Score = 101 bits (252), Expect = 9e-20
Identities = 45/61 (73%), Positives = 54/61 (88%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD + ++G LD+MPFPPGVGGGR +GDA ++EVITAD+AIDE+NVGNRMLRNMGWHEG
Sbjct: 929 RDISVKKGSLDAMPFPPGVGGGRVSGDANLNTFEVITADRAIDENNVGNRMLRNMGWHEG 988
Query: 235 S 233
S
Sbjct: 989 S 989
>ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A-like isoform X5 [Solanum
tuberosum]
Length = 1008
Score = 100 bits (249), Expect = 2e-19
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD TFRRGV D PFPPGVGGGRS +A +QS+EVITAD+AIDESNVGNRMLRNMGW EG
Sbjct: 891 RDSTFRRGVFDPTPFPPGVGGGRSA-EANSQSFEVITADRAIDESNVGNRMLRNMGWQEG 949
>ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A-like isoform X4 [Solanum
tuberosum]
Length = 1036
Score = 100 bits (249), Expect = 2e-19
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD TFRRGV D PFPPGVGGGRS +A +QS+EVITAD+AIDESNVGNRMLRNMGW EG
Sbjct: 919 RDSTFRRGVFDPTPFPPGVGGGRSA-EANSQSFEVITADRAIDESNVGNRMLRNMGWQEG 977
>ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A-like isoform X3 [Solanum
tuberosum]
Length = 1044
Score = 100 bits (249), Expect = 2e-19
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD TFRRGV D PFPPGVGGGRS +A +QS+EVITAD+AIDESNVGNRMLRNMGW EG
Sbjct: 927 RDSTFRRGVFDPTPFPPGVGGGRSA-EANSQSFEVITADRAIDESNVGNRMLRNMGWQEG 985
>ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A-like isoform X1 [Solanum
tuberosum] gi|565385404|ref|XP_006358596.1| PREDICTED:
RNA-binding protein 5-A-like isoform X2 [Solanum
tuberosum]
Length = 1045
Score = 100 bits (249), Expect = 2e-19
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD TFRRGV D PFPPGVGGGRS +A +QS+EVITAD+AIDESNVGNRMLRNMGW EG
Sbjct: 928 RDSTFRRGVFDPTPFPPGVGGGRSA-EANSQSFEVITADRAIDESNVGNRMLRNMGWQEG 986
>ref|XP_004245861.1| PREDICTED: RNA-binding protein 5-like [Solanum lycopersicum]
Length = 1010
Score = 100 bits (249), Expect = 2e-19
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD TFRRGV D PFPPGVGGGRS +A +QS+EVITAD+AIDESNVGNRMLRNMGW EG
Sbjct: 891 RDSTFRRGVFDPTPFPPGVGGGRSA-EANSQSFEVITADRAIDESNVGNRMLRNMGWQEG 949
>ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Populus trichocarpa]
gi|550340573|gb|EEE86409.2| hypothetical protein
POPTR_0004s08000g [Populus trichocarpa]
Length = 948
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
R+ F+R LDSMPFPPGVGGGR GDA QSYEVITADKA+ ESNVGNRMLRNMGW EG
Sbjct: 831 RESAFKRSALDSMPFPPGVGGGRGIGDA--QSYEVITADKALGESNVGNRMLRNMGWQEG 888
Query: 235 S 233
S
Sbjct: 889 S 889
>ref|XP_002337704.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/61 (78%), Positives = 51/61 (83%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
R+ F+R LDSMPFPPGVGGGR GDA QSYEVITADKA+ ESNVGNRMLRNMGW EG
Sbjct: 86 RESAFKRSALDSMPFPPGVGGGRGIGDA--QSYEVITADKALGESNVGNRMLRNMGWQEG 143
Query: 235 S 233
S
Sbjct: 144 S 144
>ref|XP_002327561.1| predicted protein [Populus trichocarpa]
Length = 988
Score = 98.6 bits (244), Expect = 8e-19
Identities = 48/61 (78%), Positives = 50/61 (81%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD F+R LD MPFPPGVGGGR GDA QSYEVITADKA+ ESNVGNRMLRNMGW EG
Sbjct: 872 RDSAFKRSTLDPMPFPPGVGGGRVIGDA--QSYEVITADKALGESNVGNRMLRNMGWQEG 929
Query: 235 S 233
S
Sbjct: 930 S 930
>ref|XP_006372488.1| zinc finger family protein [Populus trichocarpa]
gi|550319114|gb|ERP50285.1| zinc finger family protein
[Populus trichocarpa]
Length = 988
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/61 (77%), Positives = 49/61 (80%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD F+R LD MPFPPGVGGGR GDA QSYEVIT DKA+ ESNVGNRMLRNMGW EG
Sbjct: 872 RDSAFKRSTLDPMPFPPGVGGGRVIGDA--QSYEVITVDKALGESNVGNRMLRNMGWQEG 929
Query: 235 S 233
S
Sbjct: 930 S 930
>ref|XP_006430373.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|567875579|ref|XP_006430379.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|567875607|ref|XP_006430393.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532430|gb|ESR43613.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532436|gb|ESR43619.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532450|gb|ESR43633.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 899
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD ++G +DSMPFPPGVGG T D+ QSYEVITADKAIDE+NVGNRMLR+MGWHEG
Sbjct: 831 RDFALKKGSVDSMPFPPGVGGRGFTADSV-QSYEVITADKAIDENNVGNRMLRSMGWHEG 889
Query: 235 SV 230
V
Sbjct: 890 LV 891
>ref|XP_006430372.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|567875601|ref|XP_006430390.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|567875603|ref|XP_006430391.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532429|gb|ESR43612.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532447|gb|ESR43630.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
gi|557532448|gb|ESR43631.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 898
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD ++G +DSMPFPPGVGG T D+ QSYEVITADKAIDE+NVGNRMLR+MGWHEG
Sbjct: 830 RDFALKKGSVDSMPFPPGVGGRGFTADSV-QSYEVITADKAIDENNVGNRMLRSMGWHEG 888
Query: 235 SV 230
V
Sbjct: 889 LV 890
>ref|XP_006430370.1| hypothetical protein CICLE_v10010959mg [Citrus clementina]
gi|557532427|gb|ESR43610.1| hypothetical protein
CICLE_v10010959mg [Citrus clementina]
Length = 999
Score = 92.4 bits (228), Expect = 5e-17
Identities = 45/62 (72%), Positives = 51/62 (82%)
Frame = -3
Query: 415 RDPTFRRGVLDSMPFPPGVGGGRSTGDATTQSYEVITADKAIDESNVGNRMLRNMGWHEG 236
RD ++G +DSMPFPPGVGG T D+ QSYEVITADKAIDE+NVGNRMLR+MGWHEG
Sbjct: 931 RDFALKKGSVDSMPFPPGVGGRGFTADSV-QSYEVITADKAIDENNVGNRMLRSMGWHEG 989
Query: 235 SV 230
V
Sbjct: 990 LV 991