BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00018294
         (834 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein [Bryonia dioica]                       360   3e-97
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   312   8e-83
ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203...   302   9e-80
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     292   1e-76
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   287   3e-75
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   283   4e-74
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   283   4e-74
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   282   9e-74
ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213...   277   3e-72
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   275   1e-71
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     275   1e-71
gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subc...   273   4e-71
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   269   8e-70
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   268   1e-69
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     266   9e-69
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]         265   1e-68
emb|CBI20118.3| unnamed protein product [Vitis vinifera]              260   4e-67
emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]   257   4e-66
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]   257   4e-66
emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]   256   9e-66

>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
          Length = 1292

 Score =  360 bits (925), Expect = 3e-97
 Identities = 176/278 (63%), Positives = 215/278 (77%), Gaps = 1/278 (0%)
 Frame = +1

Query: 4    LYFIKPNE-QPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            LY ++P     +LN EMF+    + K+QKVS +   YLWHLRLGHI+L RI RL K G L
Sbjct: 409  LYKLRPTRANVVLNTEMFRTLETQNKKQKVSSN--AYLWHLRLGHINLNRIERLVKSGIL 466

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
             +L+ ++LP CESCLEGKMTKR F+ KG RAK PLELVHSD+CGPM  +ARGG+EYF++F
Sbjct: 467  NQLEDNSLPPCESCLEGKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISF 526

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
            IDD+SR+G+VYL+H KS               ++GK++K LRSDRGGEY+D++F+DYL+E
Sbjct: 527  IDDFSRYGHVYLLHHKSESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIE 586

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI  QL+AP TPQQNGV+ERRNRTLLDMVRSMMSYA LPDSFWGYAL+TA++ILN VPS
Sbjct: 587  FGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPS 646

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGCPAHVLKGKTGKL 834
            KS+ +TP ELW G K SLR+FRIWGCPAHVL     KL
Sbjct: 647  KSVLETPYELWKGRKSSLRYFRIWGCPAHVLVQNPKKL 684


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  312 bits (800), Expect = 8e-83
 Identities = 156/254 (61%), Positives = 187/254 (73%), Gaps = 2/254 (0%)
 Frame = +1

Query: 4    LYFIKPN-EQPLLNAEMFKVEHPKP-KRQKVSQDDETYLWHLRLGHISLERINRLAKDGP 177
            LY +K   E  L N+E+   +   P KR++  +   TYLWHLRLGHI+L+RI+ L KDGP
Sbjct: 725  LYILKVTPELQLTNSEVNNFDIVAPLKRKRPIELSYTYLWHLRLGHINLDRISLLVKDGP 784

Query: 178  LRELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVT 357
            L  LKV+ LP CESCLEGKMTKRPF  KGNRA + LEL+HSD+CGPM+ QARGGFEYFVT
Sbjct: 785  LSSLKVEALPTCESCLEGKMTKRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVT 844

Query: 358  FIDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLL 537
            F DDYSR+GY+YL+ RKS               + GK +K LRSD GGEY+  EF  +L 
Sbjct: 845  FTDDYSRYGYIYLLCRKSECFEKFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLS 904

Query: 538  EHGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVP 717
            E GI  QL+APG PQQNGVAERRNRTL++MVRSMMSY+ LP S WG+A++TA YILN+VP
Sbjct: 905  EQGITSQLSAPGMPQQNGVAERRNRTLMEMVRSMMSYSDLPISLWGHAIETAAYILNLVP 964

Query: 718  SKSIQKTPLELWNG 759
            SKS+ KTP ELW G
Sbjct: 965  SKSVPKTPTELWTG 978


>ref|XP_004153206.1| PREDICTED: uncharacterized protein LOC101203928, partial [Cucumis
           sativus]
          Length = 486

 Score =  302 bits (774), Expect = 9e-80
 Identities = 148/230 (64%), Positives = 178/230 (77%)
 Frame = +1

Query: 145 ERINRLAKDGPLRELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTT 324
           +RI RL K G L  L+ ++LP CESCLEGKMTKR F+ KG RAK PLELVHSD+CGPM  
Sbjct: 253 KRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNV 312

Query: 325 QARGGFEYFVTFIDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGE 504
           +ARGG+EYF++FIDDYSR+G++YL+H KS               +LGK++K LRSDRGGE
Sbjct: 313 KARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGE 372

Query: 505 YVDTEFKDYLLEHGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYAL 684
           Y+D  F+DYL+E+GI  QL+AP TPQQNGV+ERRNRTLLDMVRSMMS++ +PDSF GYAL
Sbjct: 373 YMDLRFQDYLIENGIKSQLSAPSTPQQNGVSERRNRTLLDMVRSMMSFSQMPDSFLGYAL 432

Query: 685 QTAVYILNVVPSKSIQKTPLELWNGSKVSLRHFRIWGCPAHVLKGKTGKL 834
           +TA YILN V SKS+ +TP EL  G K SLRHFRIWGCPA+VL     KL
Sbjct: 433 ETAAYILNNVLSKSVSETPYELEKGRKSSLRHFRIWGCPANVLVQNPKKL 482


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  292 bits (747), Expect = 1e-76
 Identities = 146/278 (52%), Positives = 188/278 (67%), Gaps = 2/278 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   +LN E   + +   +RQ  +  + T++WH RLGHI+ +R+ +L KDG L
Sbjct: 402  YFHAPLVNGLYVLNLEASPIYNINTERQLSNDINPTFIWHCRLGHINKKRMEKLHKDGLL 461

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++   CESCL GKMTK PF+    RA + L LVH+DVCGPM++ ARGG++YF+TF
Sbjct: 462  HSFDFESFETCESCLLGKMTKAPFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITF 521

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             DD+SR+GY+YLM  KS                LGK++K LRSDRGGEYV  EF ++L +
Sbjct: 522  TDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHLKD 581

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ NGV+ERRNRTLLDMVRSMMS + LP SFWGYAL+TA   LN VPS
Sbjct: 582  CGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQSDLPLSFWGYALETAALTLNRVPS 641

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGCPAHVLKGKTGKL 834
            KS++KTP E+W G   SL   +IWGC A+V + ++ KL
Sbjct: 642  KSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSDKL 679


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  287 bits (735), Expect = 3e-75
 Identities = 149/280 (53%), Positives = 179/280 (63%), Gaps = 2/280 (0%)
 Frame = +1

Query: 1    GLYFIKPN-EQPLLNAEMFKVEHPKPKRQKVSQD-DETYLWHLRLGHISLERINRLAKDG 174
            GLY +K   E  L N+E+   +   P ++K   +   TYLWHLRLGHI+L+RI+ L KDG
Sbjct: 372  GLYILKVTPELQLTNSEVNNFDIVAPLKRKCPIELSYTYLWHLRLGHINLDRISLLVKDG 431

Query: 175  PLRELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFV 354
            PL  LKV+ LP CESCLEGKMT RPF  KGNRA + LEL+HSD+CGPM+ QARGGFEYFV
Sbjct: 432  PLSSLKVEALPTCESCLEGKMTNRPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFV 491

Query: 355  TFIDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYL 534
            TF  DYSR+GY+YL+ RKS               + GK +K LRSD GGEY+  EF  +L
Sbjct: 492  TFTYDYSRYGYIYLLRRKSECFEKFKAFKAETEKRHGKYIKTLRSDHGGEYISREFITFL 551

Query: 535  LEHGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVV 714
             E GI  QL+AP                            LP SFWG+ ++TA YILN+V
Sbjct: 552  SEQGITSQLSAPD---------------------------LPISFWGHVIETAAYILNLV 584

Query: 715  PSKSIQKTPLELWNGSKVSLRHFRIWGCPAHVLKGKTGKL 834
            PSKS+ KTP ELW G K SL+H R+WGCP HVLKGKT KL
Sbjct: 585  PSKSVFKTPTELWTGRKPSLKHVRMWGCPTHVLKGKTDKL 624


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77550379|gb|ABA93176.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 938

 Score =  283 bits (725), Expect = 4e-74
 Identities = 141/266 (53%), Positives = 179/266 (67%), Gaps = 2/266 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   ++N +   V +   KRQ+ +  + T++WH RLGHI+  R+ +L +DG L
Sbjct: 287  YFHAPMMNGLYIVNLDGCSVYNINAKRQRPNDLNPTFIWHCRLGHINERRMEKLHRDGLL 346

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++   CESCL GKMTK PF+ +  +A E L LVH+DVCGPM++ ARGGF YF+TF
Sbjct: 347  HSFDFESFETCESCLLGKMTKAPFTGQSEKASELLGLVHTDVCGPMSSTARGGFGYFITF 406

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             +D+SR+GYVYLM  KS                LGK++K LRSDRGGEY+  EF ++L E
Sbjct: 407  TNDFSRYGYVYLMRHKSDSFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKE 466

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ NGV+ERRNRTLLDMVRSMMS   LP SFWGY L+TA + LN VPS
Sbjct: 467  CGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQTDLPLSFWGYTLETAAFTLNRVPS 526

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGC 798
            KS+ KTP E+W G + SL   +IWGC
Sbjct: 527  KSVDKTPYEIWTGKRPSLSFLKIWGC 552


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  283 bits (725), Expect = 4e-74
 Identities = 139/267 (52%), Positives = 180/267 (67%)
 Frame = +1

Query: 34   LLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVC 213
            ++N   + V +   KRQ+ +  + T++WH RLGHI+ +R+ ++ +DG L     ++   C
Sbjct: 389  IVNLNGYSVYNINAKRQRPNDLNPTFIWHCRLGHINEKRMEKIHRDGLLHSFDFESFETC 448

Query: 214  ESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVY 393
            ESCL GKMTK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF TF DD+SR+GYVY
Sbjct: 449  ESCLLGKMTKAPFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVY 508

Query: 394  LMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLEHGILYQLTAPG 573
            LM  KS                LGK++K LRSDRGGEY+  EF ++L E GI+ QLT PG
Sbjct: 509  LMRHKSESFEKFKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPG 568

Query: 574  TPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELW 753
            TPQ NGV+E RNRTLLDMVRSMMS   L  SFWGYAL+T  + LN VPSKS+ KTP E+W
Sbjct: 569  TPQWNGVSEWRNRTLLDMVRSMMSQTNLLLSFWGYALETTAFTLNSVPSKSVDKTPYEIW 628

Query: 754  NGSKVSLRHFRIWGCPAHVLKGKTGKL 834
             G + SL   +IWGC  +V + ++ KL
Sbjct: 629  TGKRPSLSFLKIWGCEVYVKRLQSDKL 655


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  282 bits (722), Expect = 9e-74
 Identities = 138/267 (51%), Positives = 179/267 (67%)
 Frame = +1

Query: 34  LLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVC 213
           +LN  M  + + + K+ K +  + T+LWH RLGHI+ + I +L  DG L     ++   C
Sbjct: 58  VLNQSM-PIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETC 116

Query: 214 ESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVY 393
           ESCL GKMTK PF+    RA + L L+H+DVCGPM+T ARG ++YF+TF DD+SR+GYVY
Sbjct: 117 ESCLLGKMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVY 176

Query: 394 LMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLEHGILYQLTAPG 573
           LM  KS               Q GKS+K LRSDRGGEY+   F D+L E GI+ QLT PG
Sbjct: 177 LMKHKSKSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPG 236

Query: 574 TPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELW 753
           TPQ NGV+ERRNRTLLDMVRSMMS+  LP  FWGYAL+T+ ++LN  PSKS++KTP E+W
Sbjct: 237 TPQWNGVSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIW 296

Query: 754 NGSKVSLRHFRIWGCPAHVLKGKTGKL 834
            G   +L   +IWGC ++  +  T KL
Sbjct: 297 TGKVPNLSFLKIWGCESYAKRLITDKL 323


>ref|XP_004150929.1| PREDICTED: uncharacterized protein LOC101213227 [Cucumis sativus]
          Length = 513

 Score =  277 bits (709), Expect = 3e-72
 Identities = 132/203 (65%), Positives = 159/203 (78%)
 Frame = +1

Query: 226 EGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHR 405
           +GKMTKR F+ KG RAK PLELVHSD+CGPM  +ARGG+EYF++FIDDYSR+G++YL+H 
Sbjct: 253 KGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHH 312

Query: 406 KSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLEHGILYQLTAPGTPQQ 585
           KS               +LGK++K LRSDRGGEY+D  F+DYL+E+GI  QL+AP TPQQ
Sbjct: 313 KSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQ 372

Query: 586 NGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWNGSK 765
           NGV+ERRN+TLLDMVRSMMS++ + DSFWGYAL+TA YIL  VPSKS+ +TP EL  G K
Sbjct: 373 NGVSERRNQTLLDMVRSMMSFSQMSDSFWGYALETAAYILKNVPSKSVSETPYELEKGRK 432

Query: 766 VSLRHFRIWGCPAHVLKGKTGKL 834
            SLRHFRIWGCPAHVL     KL
Sbjct: 433 GSLRHFRIWGCPAHVLVQNPKKL 455


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  275 bits (703), Expect = 1e-71
 Identities = 138/266 (51%), Positives = 177/266 (66%), Gaps = 2/266 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   ++N +   V +   KRQ+ +  + T++WH  LGHI+ +RI +L +DG L
Sbjct: 367  YFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRIEKLHRDGLL 426

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++   CESCL GKMTK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF
Sbjct: 427  HSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITF 486

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             D++SR+GYVYLM  KS                LGK++K LRSDRGGEY+  E+ ++L E
Sbjct: 487  TDEFSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKE 546

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ N V+ERRNR LLDMVRSMMS   +P SFWGYAL+TA + LN VPS
Sbjct: 547  CGIVPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPS 606

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGC 798
            KS+ KTP E+W G + SL   +IW C
Sbjct: 607  KSVDKTPYEIWTGKRPSLSFLKIWCC 632


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  275 bits (703), Expect = 1e-71
 Identities = 138/266 (51%), Positives = 177/266 (66%), Gaps = 2/266 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   ++N +   V +   KRQ+ +  + T++WH  LGHI+ +RI +L +DG L
Sbjct: 280  YFHAPMMNGLYIVNLDGCSVYNINAKRQRPNNLNPTFIWHCCLGHINEKRIEKLHRDGLL 339

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++   CESCL GKMTK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF
Sbjct: 340  HSFDFESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITF 399

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             D++SR+GYVYLM  KS                LGK++K LRSDRGGEY+  E+ ++L E
Sbjct: 400  TDEFSRYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKE 459

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ N V+ERRNR LLDMVRSMMS   +P SFWGYAL+TA + LN VPS
Sbjct: 460  CGIVPQLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPS 519

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGC 798
            KS+ KTP E+W G + SL   +IW C
Sbjct: 520  KSVDKTPYEIWTGKRPSLSFLKIWCC 545


>gb|ABA98367.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1745

 Score =  273 bits (699), Expect = 4e-71
 Identities = 136/267 (50%), Positives = 178/267 (66%)
 Frame = +1

Query: 34   LLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVC 213
            ++N +   + +   KRQ  +  + T++WH RLGHI+ +R+ +L +DG L  L  ++   C
Sbjct: 889  IVNLDGCSIYNINAKRQGPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSLDFESFETC 948

Query: 214  ESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVY 393
            ESCL GKMTK PF+ +  R  E L LVH+DVCGPM++ AR GF YF+TF DD+SR+GYVY
Sbjct: 949  ESCLLGKMTKAPFTGQSERTSELLVLVHTDVCGPMSSTARCGFGYFITFTDDFSRYGYVY 1008

Query: 394  LMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLEHGILYQLTAPG 573
            LM  KS                L K++K LRSD GGEY+  EF ++L   GI+ QLT PG
Sbjct: 1009 LMRHKSESFEKFKEFQNEVQNHLRKTIKYLRSDHGGEYLSLEFGNHLKGCGIVPQLTPPG 1068

Query: 574  TPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELW 753
            TPQ NGV+ERRNRTLL+MVRSMMS   L  SFWGYAL+TA + LN VPSKS+ KTP E+W
Sbjct: 1069 TPQWNGVSERRNRTLLNMVRSMMSQTNLLLSFWGYALETAAFTLNRVPSKSVDKTPYEIW 1128

Query: 754  NGSKVSLRHFRIWGCPAHVLKGKTGKL 834
             G + SL   +IWGC  +V + ++ KL
Sbjct: 1129 TGKRPSLSFLKIWGCEVYVKRLQSDKL 1155


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  269 bits (688), Expect = 8e-70
 Identities = 140/278 (50%), Positives = 182/278 (65%), Gaps = 2/278 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   ++N +   V +   KRQ  +  + T++WH RLGHI+ +R+ +L +DG L
Sbjct: 454  YFHVPMMNGLYIVNLDGCSVYNINAKRQCPNYLNPTFIWHCRLGHINEKRMEKLHRDGLL 513

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++    ESCL GKMTK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF
Sbjct: 514  HSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITF 573

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             DD+S++GYVYLM  KS                LGK++K LRSDRGGEY+  EF ++  E
Sbjct: 574  TDDFSKYGYVYLMRHKSESFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKE 633

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ N V+ERRNRTLLDMVRSMMS   LP SF GYAL+T  + LN VPS
Sbjct: 634  CGIVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNLPLSFSGYALETTAFTLNWVPS 693

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWGCPAHVLKGKTGKL 834
            KS+ KTP E+W G++ SL   +IWG   +V + ++ KL
Sbjct: 694  KSVDKTPYEIWTGNRPSLSFLKIWGYEVYVKRLQSDKL 731


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  268 bits (686), Expect = 1e-69
 Identities = 131/258 (50%), Positives = 172/258 (66%)
 Frame = +1

Query: 1    GLYFIKPNEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            GL+ +  ++ P+ N           KR + +  + T++WH RLGHIS +R+ +L  DG L
Sbjct: 498  GLFILNLDDAPIFNINA--------KRLRPNNMNSTFIWHCRLGHISEKRMKKLHDDGIL 549

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                +++   CESC+ GKMTK PF+ +  RA + L L+H+DVCGPM+T ARGGF+YF+TF
Sbjct: 550  NSFDLESFETCESCILGKMTKTPFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITF 609

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             DDYSR+GY+YLM  KS               QLGK++K LRSDRGGE++  EF ++L +
Sbjct: 610  TDDYSRYGYIYLMRHKSESFEKFKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHLKQ 669

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT P TPQ NGV+ER NRTLLDMVR MMS + LP  FWGYAL+TA + LN VPS
Sbjct: 670  CGIVPQLTPPSTPQWNGVSERCNRTLLDMVRLMMSQSDLPLYFWGYALETAAFTLNRVPS 729

Query: 721  KSIQKTPLELWNGSKVSL 774
            KS+ KTP E+W G   SL
Sbjct: 730  KSVDKTPYEIWTGKSPSL 747


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  266 bits (679), Expect = 9e-69
 Identities = 137/265 (51%), Positives = 175/265 (66%), Gaps = 2/265 (0%)
 Frame = +1

Query: 7    YFIKP--NEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            YF  P  N   ++N +   V +   KRQ  +  + T++WH RLGHI+ +R+ +L +DG L
Sbjct: 381  YFHVPMMNGLYIVNLDGCSVYNINAKRQCPNYLNPTFIWHCRLGHINEKRMEKLHRDGLL 440

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTF 360
                 ++    ESCL GKMTK PF+ +  RA E L LVH+DVCGPM++ ARGGF YF+TF
Sbjct: 441  HSFDFESFKTYESCLLGKMTKGPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITF 500

Query: 361  IDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLE 540
             DD+S++GYVYLM  KS                LGK++K LRSDRGGEY+  EF ++  E
Sbjct: 501  TDDFSKYGYVYLMRHKSESFEKFKEFQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHRKE 560

Query: 541  HGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPS 720
             GI+ QLT PGTPQ N V+ERRNRTLLDMVRSMMS   LP SF GYAL+T  + LN VPS
Sbjct: 561  CGIVPQLTPPGTPQWNAVSERRNRTLLDMVRSMMSQTNLPLSFSGYALETTAFTLNWVPS 620

Query: 721  KSIQKTPLELWNGSKVSLRHFRIWG 795
            KS+ KTP E+W G++ SL   +IWG
Sbjct: 621  KSVDKTPYEIWTGNRPSLSFLKIWG 645


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score =  265 bits (678), Expect = 1e-68
 Identities = 132/253 (52%), Positives = 170/253 (67%)
 Frame = +1

Query: 76  KRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVCESCLEGKMTKRPFS 255
           KRQ+ +  + T++WH RLGHI+ +R+ +L +DG L     ++    E CL GKMTK PF+
Sbjct: 221 KRQRPNDLNPTFIWHCRLGHINEKRMEKLHRDGLLHSFDFESFETYEFCLLGKMTKAPFT 280

Query: 256 AKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSXXXXXXXX 435
            +  R+ E L LVH DVC PM++ ARGGF YF+TF DD+SR+ YVYLM  KS        
Sbjct: 281 GQSERSSELLGLVHIDVCEPMSSTARGGFGYFITFTDDFSRYVYVYLMRHKSESFEKFKE 340

Query: 436 XXXXXXXQLGKSLKCLRSDRGGEYVDTEFKDYLLEHGILYQLTAPGTPQQNGVAERRNRT 615
                   LGK++K LRSDRGGEY+  EF ++L E GI+ QLT PGTPQ N V+ERRNRT
Sbjct: 341 FQNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNRVSERRNRT 400

Query: 616 LLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQKTPLELWNGSKVSLRHFRIWG 795
           LLDMV+SMMS   LP  FWGYAL+TA + LN VPSKS+ KT  E+W G + SL   +IWG
Sbjct: 401 LLDMVQSMMSQTDLPLCFWGYALETAAFTLNRVPSKSVDKTSYEIWTGKRPSLSFLKIWG 460

Query: 796 CPAHVLKGKTGKL 834
           C  +V + ++ KL
Sbjct: 461 CEVYVKRLQSDKL 473


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  260 bits (665), Expect = 4e-67
 Identities = 137/278 (49%), Positives = 176/278 (63%), Gaps = 10/278 (3%)
 Frame = +1

Query: 1    GLYFIKPNEQPLLNAEMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPL 180
            GLY I  N +      +  +      ++ +  ++ + LWH RLGHIS ERI RL K+G L
Sbjct: 771  GLYKISLNHE--FAQALITLHSNVGSKRGLINENSSILWHRRLGHISRERIERLVKEGIL 828

Query: 181  RELKVDTLPVCESCLEGKMTKRPFSAKG-NRAKEPLELVHSDVCGPMTTQARGGFEYFVT 357
            + L      VC +C++GK TK   + KG  R+ E LE++H+D+CGP++     G +YF+T
Sbjct: 829  QNLDFTDFHVCVNCIKGKQTKH--TKKGATRSNELLEIIHTDICGPLSIPCFTGEKYFIT 886

Query: 358  FIDDYSRFGYVYLMHRKSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDT------- 516
            FIDD SR+GYVYLMH KS               QL K +K +RSD+GGEY          
Sbjct: 887  FIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIKIVRSDQGGEYYGRYDESGQN 946

Query: 517  --EFKDYLLEHGILYQLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQT 690
               F  +L +HGI  Q T PGTPQQNGVAERRNRTL++MVRSMMSY+++P S WG AL+T
Sbjct: 947  PGPFAKFLEKHGIRAQYTMPGTPQQNGVAERRNRTLMEMVRSMMSYSSVPISLWGEALKT 1006

Query: 691  AVYILNVVPSKSIQKTPLELWNGSKVSLRHFRIWGCPA 804
            A+YILN VPSK++ KTP ELW G K SLRH  IWGCPA
Sbjct: 1007 AMYILNRVPSKAVPKTPFELWTGRKPSLRHIHIWGCPA 1044


>emb|CAN67821.1| hypothetical protein VITISV_025855 [Vitis vinifera]
          Length = 1356

 Score =  257 bits (656), Expect = 4e-66
 Identities = 133/263 (50%), Positives = 164/263 (62%), Gaps = 10/263 (3%)
 Frame = +1

Query: 46   EMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVCESCL 225
            E   VE    KR K+++D+   LWH RLGHIS  R+ RL  DG L  L      +C  C+
Sbjct: 413  ETLHVESRGTKR-KLNKDNSASLWHKRLGHISKSRVERLVSDGILDSLDFSDFDICVECI 471

Query: 226  EGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHR 405
            +GK TK       NRA + LEL+H+D+CGP  T +  G +YF+TFIDDYSR+GY++L+H 
Sbjct: 472  KGKQTKTK-KLGANRATDVLELIHTDICGPYPTASWNGQQYFITFIDDYSRYGYLFLIHE 530

Query: 406  KSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDT----------EFKDYLLEHGILY 555
            KS               QL K +K +RSDRGGEY              F  YL E GI+ 
Sbjct: 531  KSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEECGIVP 590

Query: 556  QLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQK 735
            Q T PG+P  NGVAERRNRTL DMVRSM+S++TLP+  WG AL+TA YILN VP+K+  K
Sbjct: 591  QYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKTAAYILNRVPTKAAAK 650

Query: 736  TPLELWNGSKVSLRHFRIWGCPA 804
            TP ELW G K SL+HF IWGCPA
Sbjct: 651  TPYELWTGRKPSLKHFHIWGCPA 673


>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
          Length = 1250

 Score =  257 bits (656), Expect = 4e-66
 Identities = 133/263 (50%), Positives = 164/263 (62%), Gaps = 10/263 (3%)
 Frame = +1

Query: 46   EMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVCESCL 225
            E   VE    KR K+++D+   LWH RLGHIS  R+ RL  DG L  L      +C  C+
Sbjct: 289  ETLHVESRGTKR-KLNKDNSASLWHKRLGHISKSRVERLVSDGILDSLDFSDFDICVECI 347

Query: 226  EGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHR 405
            +GK TK       NRA + LEL+H+D+CGP  T +  G +YF+TFIDDYSR+GY++L+H 
Sbjct: 348  KGKQTKTK-KLGANRATDVLELIHTDICGPYPTASWNGQQYFITFIDDYSRYGYLFLIHE 406

Query: 406  KSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDT----------EFKDYLLEHGILY 555
            KS               QL K +K +RSDRGGEY              F  YL E GI+ 
Sbjct: 407  KSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEECGIVP 466

Query: 556  QLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQK 735
            Q T PG+P  NGVAERRNRTL DMVRSM+S++TLP+  WG AL+TA YILN VP+K+  K
Sbjct: 467  QYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKTAAYILNRVPTKAAAK 526

Query: 736  TPLELWNGSKVSLRHFRIWGCPA 804
            TP ELW G K SL+HF IWGCPA
Sbjct: 527  TPYELWTGRKPSLKHFHIWGCPA 549


>emb|CAN83623.1| hypothetical protein VITISV_010870 [Vitis vinifera]
          Length = 1601

 Score =  256 bits (653), Expect = 9e-66
 Identities = 133/263 (50%), Positives = 163/263 (61%), Gaps = 10/263 (3%)
 Frame = +1

Query: 46   EMFKVEHPKPKRQKVSQDDETYLWHLRLGHISLERINRLAKDGPLRELKVDTLPVCESCL 225
            E   VE    KR K+++D+   LWH RLGHIS  R+ RL  DG L  L      +C  C+
Sbjct: 724  ETLHVESRGTKR-KLNKDNSASLWHKRLGHISKSRVERLVSDGILDSLDFSDFDICVECI 782

Query: 226  EGKMTKRPFSAKGNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHR 405
            +GK TK       NRA + LEL+H+D+CGP  T +  G +YF+TFIDDYSR+GY++L+H 
Sbjct: 783  KGKQTKTK-KLGANRATDVLELIHTDICGPYPTASWNGQQYFITFIDDYSRYGYLFLIHE 841

Query: 406  KSXXXXXXXXXXXXXXXQLGKSLKCLRSDRGGEYVDT----------EFKDYLLEHGILY 555
            KS               QL K +K +RSDRGGEY              F  YL E GI+ 
Sbjct: 842  KSQSLDVFKTFKAEVELQLNKRIKSVRSDRGGEYYGRYDGSGEQRPGPFAKYLEECGIVP 901

Query: 556  QLTAPGTPQQNGVAERRNRTLLDMVRSMMSYATLPDSFWGYALQTAVYILNVVPSKSIQK 735
            Q T PG+P  NGVAERRNRTL DMVRSM+S++TLP+  WG AL+TA YILN VP+K   K
Sbjct: 902  QYTMPGSPSMNGVAERRNRTLKDMVRSMISHSTLPEKLWGEALKTAAYILNRVPTKVAAK 961

Query: 736  TPLELWNGSKVSLRHFRIWGCPA 804
            TP ELW G K SL+HF IWGCPA
Sbjct: 962  TPYELWTGRKSSLKHFHIWGCPA 984