BLASTX nr result

ID: Rehmannia23_contig00018196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00018196
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347500.1| PREDICTED: growth-regulating factor 6-like i...    61   1e-07
ref|XP_004235120.1| PREDICTED: growth-regulating factor 2-like [...    61   1e-07
ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250...    57   3e-06
emb|CBI23073.3| unnamed protein product [Vitis vinifera]               57   3e-06

>ref|XP_006347500.1| PREDICTED: growth-regulating factor 6-like isoform X1 [Solanum
           tuberosum] gi|565361513|ref|XP_006347501.1| PREDICTED:
           growth-regulating factor 6-like isoform X2 [Solanum
           tuberosum]
          Length = 469

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 19/135 (14%)
 Frame = -2

Query: 407 RHLHRGRPRSRKPVEVK---NTTENNKKTRLEQSK--------SIPTAQSNSAASQQ--- 270
           RH+HRGRPRSRK VEV    +   +NKKTRL+           + P +Q N+ +++Q   
Sbjct: 150 RHMHRGRPRSRKHVEVHAGVSNASDNKKTRLQVESTTMAVTIPTTPASQINNRSTKQPLR 209

Query: 269 --FVSTNEPLLIFNAKT--DLSIGT-PYHKGTDRDLGLMMETENMVERHSSVEQQPWQHL 105
             F     PL   + K   + +I T P +    R  G MME E + +  S    Q WQHL
Sbjct: 210 STFQQIQSPLFFHDDKIGGNGNISTDPSYNELHRTSGWMMEGELVAKADSG---QQWQHL 266

Query: 104 IEANMGLLSDYSSYG 60
           +++N G    YS++G
Sbjct: 267 MDSNAG----YSAHG 277


>ref|XP_004235120.1| PREDICTED: growth-regulating factor 2-like [Solanum lycopersicum]
          Length = 450

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 49/129 (37%), Positives = 68/129 (52%), Gaps = 13/129 (10%)
 Frame = -2

Query: 407 RHLHRGRPRSRKPVEVK---NTTENNKKTRLEQSKSIPT---AQSNSAASQQ-----FVS 261
           RH+HRGRPRSRK VEV    +   +NKKTRL Q++SIPT   +Q N+ +++Q     F  
Sbjct: 137 RHMHRGRPRSRKHVEVHAGVSNASDNKKTRL-QAESIPTTTASQINNRSTKQPLRSTFQQ 195

Query: 260 TNEPLLIFNAKTDLS--IGTPYHKGTDRDLGLMMETENMVERHSSVEQQPWQHLIEANMG 87
              PL   + K   +  I         R  G MME E + +  S      WQHL+++N G
Sbjct: 196 IQNPLSFHDDKIGGNGIISDSSFNELHRSSGWMMEGELVAKADSG---HQWQHLMDSNAG 252

Query: 86  LLSDYSSYG 60
               YS++G
Sbjct: 253 ----YSAHG 257


>ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250422 [Vitis vinifera]
          Length = 549

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
 Frame = -2

Query: 407 RHLHRGRPRSRKPVEV-KNTTENNKKTR-------LEQSKSIPTAQSNSAASQQFVST-- 258
           RH+HRGRPRSRKPVEV  +   ++KKTR          + S P   + S +  Q++ +  
Sbjct: 193 RHMHRGRPRSRKPVEVHADVNSSHKKTRHCHALPATPATLSSPMLTNTSCSQSQYLGSAL 252

Query: 257 ----NEPLLIFNAKTDLS-----IGTPYHKGTDRDLGLMMETENMVERHSSVEQQPWQHL 105
                 P+ ++ + +  S     +  P  K T R L  M + E       +   Q WQ L
Sbjct: 253 DPRHQSPVFLYKSDSKASPFTPLVSVPSFKET-RSLEWMAKGE---AAPMATSDQQWQQL 308

Query: 104 IEANMGLLSDYS-----SYGPIFDQDYVDQHPMNVFSY 6
           ++  +GL  + S     S   +F+Q Y  + P+N+ SY
Sbjct: 309 MQTKIGLTIESSSSICNSNASVFNQQY-QEEPINLNSY 345


>emb|CBI23073.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
 Frame = -2

Query: 407 RHLHRGRPRSRKPVEV-KNTTENNKKTR-------LEQSKSIPTAQSNSAASQQFVST-- 258
           RH+HRGRPRSRKPVEV  +   ++KKTR          + S P   + S +  Q++ +  
Sbjct: 220 RHMHRGRPRSRKPVEVHADVNSSHKKTRHCHALPATPATLSSPMLTNTSCSQSQYLGSAL 279

Query: 257 ----NEPLLIFNAKTDLS-----IGTPYHKGTDRDLGLMMETENMVERHSSVEQQPWQHL 105
                 P+ ++ + +  S     +  P  K T R L  M + E       +   Q WQ L
Sbjct: 280 DPRHQSPVFLYKSDSKASPFTPLVSVPSFKET-RSLEWMAKGE---AAPMATSDQQWQQL 335

Query: 104 IEANMGLLSDYS-----SYGPIFDQDYVDQHPMNVFSY 6
           ++  +GL  + S     S   +F+Q Y  + P+N+ SY
Sbjct: 336 MQTKIGLTIESSSSICNSNASVFNQQY-QEEPINLNSY 372