BLASTX nr result

ID: Rehmannia23_contig00018177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00018177
         (624 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCF72394.1| bHLH trascription factor [Nicotiana tabacum] gi|...    64   4e-08
emb|CCF72393.1| bHLH trascription factor [Nicotiana tabacum] gi|...    64   4e-08
emb|CCF72395.1| bHLH trascription factor [Nicotiana occidentalis...    61   2e-07
gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]...    58   3e-06
ref|XP_006363974.1| PREDICTED: transcription factor bHLH137-like...    57   3e-06

>emb|CCF72394.1| bHLH trascription factor [Nicotiana tabacum]
           gi|464092884|emb|CCF72396.1| bHLH transcription factor
           [Nicotiana tabacum]
          Length = 260

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 13/100 (13%)
 Frame = +1

Query: 1   EQFMVSPGQNLSSLPSPLPGMQECSPTT-------------GNTYPXXXXXXXXXXXXXQ 141
           +  MV P Q+LS L +PLP MQ+ SPT               + YP             Q
Sbjct: 164 DALMVRPDQSLSGLGTPLPNMQQASPTNITSQAAEVIPNINNSGYPFLDNSASLMF---Q 220

Query: 142 QPQIPNTLPQGHRHVLWEVDGQRQQIINQSEISNTLFTFH 261
           Q   PN++ QG+  +LW  D QRQ+ INQS +SN   +FH
Sbjct: 221 QAHFPNSISQGNGQLLWGADDQRQKFINQSGLSNNFCSFH 260


>emb|CCF72393.1| bHLH trascription factor [Nicotiana tabacum]
           gi|464092899|emb|CCF72397.1| bHLH transcription factor
           [Nicotiana tabacum]
          Length = 362

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
 Frame = +1

Query: 1   EQFMVSPGQNLSSLPSPLPGMQECSPTT-------------GNTYPXXXXXXXXXXXXXQ 141
           +  MV P Q+LS L +PLP MQ+ SPT               + YP             Q
Sbjct: 266 DALMVRPDQSLSGLGTPLPNMQQTSPTNITSQAAEVIPNINNSGYPFLDNSASLMF---Q 322

Query: 142 QPQIPNTLPQGHRHVLWEVDGQRQQIINQSEISNTLFTFH 261
           Q   PN++ QG+  +LW  D QRQ++INQS +SN   +FH
Sbjct: 323 QVHFPNSISQGNGQLLWGADDQRQKLINQSGLSNNFCSFH 362


>emb|CCF72395.1| bHLH trascription factor [Nicotiana occidentalis subsp. hesperis]
          Length = 362

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
 Frame = +1

Query: 1   EQFMVSPGQNLSSLPSPLPGMQECSPTTGNTYPXXXXXXXXXXXXX----------QQPQ 150
           +  MV P Q+LS L +PLP MQ+ SPT   +                         QQ  
Sbjct: 266 DTLMVRPDQSLSGLGTPLPNMQQPSPTNITSQAAEVIPNINNSGYLFLDNSASLMFQQAH 325

Query: 151 IPNTLPQGHRHVLWEVDGQRQQIINQSEISNTLFTFH 261
            PN++ QG+  +LW  D QRQ+ INQS +SN   +FH
Sbjct: 326 FPNSISQGNGQLLWGADDQRQKFINQSGLSNNFCSFH 362


>gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
           gi|158147060|gb|ABW22631.1| bHLH transcription factor
           Upa20 [Capsicum annuum] gi|158147061|gb|ABW22632.1| bHLH
           transcription factor Upa20 [Capsicum annuum]
          Length = 340

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
 Frame = +1

Query: 1   EQFMVSPG-QNLSSLPSPLPGMQECSPTTG-------NTYPXXXXXXXXXXXXXQQPQIP 156
           +  MV P  QNLS L + LP +Q+ S TT        NT               QQ   P
Sbjct: 246 DALMVRPDDQNLSGLETQLPNIQQASTTTSQAAEVIPNTNSGYPFLDNSASLMFQQAHFP 305

Query: 157 NTLPQGHRHVLWEVDGQRQQIINQSEISNTLFTFH 261
           N++ QG   +LW  + QRQ+IINQS  SN   +FH
Sbjct: 306 NSIHQGIGQLLWGAEDQRQKIINQSGFSNNFCSFH 340


>ref|XP_006363974.1| PREDICTED: transcription factor bHLH137-like [Solanum tuberosum]
          Length = 338

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
 Frame = +1

Query: 1   EQFMVSPG-QNLSSLPSPLPGMQECSPTT--------GNTYPXXXXXXXXXXXXXQQPQI 153
           +  MV P  Q+LS L + +  +Q+ S TT         NT               QQ   
Sbjct: 243 DALMVKPDDQSLSGLETQMANIQQGSTTTTSQAAEVIANTNSGYPFLDNSTSLMFQQAHF 302

Query: 154 PNTLPQGHRHVLWEVDGQRQQIINQSEISNTLFTFH 261
           PN++PQG+  +LW  D QRQ+IINQS  SN   +FH
Sbjct: 303 PNSIPQGNGQLLWGADDQRQKIINQSGFSNNFCSFH 338


Top