BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00017936
         (666 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]   259   4e-67
emb|CAA73042.1| polyprotein [Ananas comosus]                          258   1e-66
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom...   254   2e-65
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...   253   3e-65
emb|CAJ65807.1| polyprotein [Citrus sinensis]                         251   1e-64
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   251   1e-64
gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative...   247   2e-63
gb|ABM55240.1| retrotransposon protein [Beta vulgaris]                245   8e-63
gb|AEV42258.1| hypothetical protein [Beta vulgaris]                   244   2e-62
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom...   243   5e-62
emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group]        243   5e-62
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]   242   8e-62
emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group]                242   8e-62
gb|ABC94893.1| polyprotein [Oryza australiensis]                      242   8e-62
gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|1087...   242   8e-62
gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subc...   241   1e-61
emb|CAH66288.1| OSIGBa0161P06.5 [Oryza sativa Indica Group]           241   1e-61
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   241   1e-61
gb|AAV25060.1| putative polyprotein [Oryza sativa Japonica Group...   241   1e-61
gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-...   241   2e-61

>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
          Length = 809

 Score =  259 bits (663), Expect = 4e-67
 Identities = 130/227 (57%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKYL +QKELNLRQRRW+ELI+DY   I YHPGK NVVADALSRK+S  LA L   
Sbjct: 458  DHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHPGKENVVADALSRKSSSSLATLQSS 517

Query: 491  EWRSLEELSTW----NPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGE 324
             +  L E+ +     N     T +  A+  V+P LLN+I+  Q  D  L++  +K+  GE
Sbjct: 518  YFSMLLEMKSLGIQLNNGEDGTLL--ASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGE 575

Query: 323  RSEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVN 144
             SEF + +DG+   R+RICVP D+QLR  IL EAH S Y +HPG  KMY+ +K+ YWW  
Sbjct: 576  ASEFRLNDDGIFMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYRTIKESYWWPG 635

Query: 143  MKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            MK  +AEFVA+CLTCQ++KAEHQ+PSG LQPL IPEWKWEH+TMDFV
Sbjct: 636  MKRDIAEFVAKCLTCQQIKAEHQKPSGTLQPLLIPEWKWEHVTMDFV 682


>emb|CAA73042.1| polyprotein [Ananas comosus]
          Length = 871

 Score =  258 bits (659), Expect = 1e-66
 Identities = 128/225 (56%), Positives = 163/225 (72%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKA--SLARLMIR 492
            DHKSLKYLF+QKELNLRQRRW+EL++DY   I YHPGKANVVADALSRK+  +LA  ++ 
Sbjct: 380  DHKSLKYLFTQKELNLRQRRWLELLKDYDLTILYHPGKANVVADALSRKSMENLAMHVVT 439

Query: 491  EWRSLEELSTWNP--IRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
            + R +E++       +   T +    + V+P LL+ IK  Q  DV+LQK+K K++ G   
Sbjct: 440  QPRLIEQMKRLELEIVTPDTPMRLMTLVVQPTLLDRIKEKQASDVELQKIKGKMVDGCTG 499

Query: 317  EFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMK 138
            +F++  DG++RFR RICVP+D  ++  IL EAHR+ Y IHPGG KMYKDLK  YWW  +K
Sbjct: 500  DFTLDGDGLMRFRGRICVPADSGIKEDILQEAHRAPYAIHPGGTKMYKDLKLLYWWPGIK 559

Query: 137  NQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
              V EFVA+CLTCQ+VKAEH+ P+G LQ L IP WKWE ITMDFV
Sbjct: 560  KDVGEFVAKCLTCQQVKAEHRVPAGKLQSLPIPVWKWEKITMDFV 604


>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1290

 Score =  254 bits (649), Expect = 2e-65
 Identities = 128/227 (56%), Positives = 159/227 (70%), Gaps = 6/227 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKYL +QKELNLRQRRW+ELI+DY   I YHPGKANVV DALSRK+S  LA L   
Sbjct: 742  DHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHPGKANVVTDALSRKSSSSLATLRSS 801

Query: 491  EWRSLEELSTW----NPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGE 324
             +  L E+ +     N     T +  A+  V+P LLN+I+  Q  D  L++  +K+  GE
Sbjct: 802  YFPMLLEMKSLGIQLNNGEDGTLL--ASFVVRPSLLNQIRELQKFDDWLKQEVQKLQDGE 859

Query: 323  RSEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVN 144
             SEF + +DG +  R+RICVP D+QLR  IL EAH S Y +HPG  KMY+ +K+ YWW  
Sbjct: 860  ASEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHSSAYALHPGSTKMYQTIKESYWWPG 919

Query: 143  MKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            MK  +AEFVA+CL CQ++KAEHQ+ SG LQPL IPEWKWEH+TMDFV
Sbjct: 920  MKRDIAEFVAKCLICQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFV 966


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score =  253 bits (647), Expect = 3e-65
 Identities = 127/227 (55%), Positives = 161/227 (70%), Gaps = 6/227 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKYL +QKELNLRQR+W+ELI+DY   I YHP KANVVADALSRK+S  LA L   
Sbjct: 953  DHKSLKYLLTQKELNLRQRQWLELIKDYDLVIDYHPRKANVVADALSRKSSSSLATLRSS 1012

Query: 491  EWRSLEELSTW----NPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGE 324
             +  L E+ +     N     T +  A+  V+P LLN+I+  Q  D  L++  +K+  G+
Sbjct: 1013 YFSMLLEMKSLGIQLNNGEDGTLL--ASFVVRPSLLNQIRELQKSDDWLKQEVQKLQDGK 1070

Query: 323  RSEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVN 144
             SEF + +DG +  R+RICVP D+QLR  IL EAH S Y +HPG  KMY+ +K+ YWW  
Sbjct: 1071 ASEFRLSDDGTLMLRDRICVPKDDQLRRAILEEAHYSAYALHPGSTKMYRTIKESYWWPG 1130

Query: 143  MKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            M+  +AEFVA+CLTCQ++KAEHQ+PSG LQPL IPEWKWEH+TMDFV
Sbjct: 1131 MERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFV 1177


>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  251 bits (642), Expect = 1e-64
 Identities = 127/230 (55%), Positives = 163/230 (70%), Gaps = 9/230 (3%)
 Frame = -2

Query: 665 DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKA--SLARL--- 501
           DHKSLKYL +QKELN RQRRW+ELI+DY   I +HPGKANVVADALSRK+  S+A L   
Sbjct: 213 DHKSLKYLVTQKELNSRQRRWIELIKDYDCTIDFHPGKANVVADALSRKSFSSIAHLRGT 272

Query: 500 ---MIREWRSLE-ELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKIL 333
              ++ E RSL  EL   N      R   AN  V+P L++++   Q  D+QL KLKE + 
Sbjct: 273 YMPLLIELRSLGVELEVDN-----CRALIANFRVRPTLIDKVHQMQDQDLQLLKLKENVQ 327

Query: 332 KGERSEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYW 153
           K  R++F++ ++GV+   NR+CVP  ++L+  I+ EAH S Y +HPG  KMY+ L+ HYW
Sbjct: 328 KDLRTDFAVRDNGVLVMGNRLCVPDIKELKKEIMEEAHCSAYAMHPGSTKMYRTLRDHYW 387

Query: 152 WVNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
           W  MK ++AEFV+RCL CQ++KAEHQRP+G  QPL IPEWKWEHITMDFV
Sbjct: 388 WQGMKREIAEFVSRCLVCQQIKAEHQRPAGFSQPLPIPEWKWEHITMDFV 437


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  251 bits (641), Expect = 1e-64
 Identities = 124/224 (55%), Positives = 160/224 (71%), Gaps = 3/224 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q ELNLRQRRW+ELI+DY   I YHPGKANVVADALSRKA    +++++ 
Sbjct: 487  DHKSLKYIFTQSELNLRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAYCNTILVQKN 546

Query: 485  RS--LEELSTWNPIRTSTRISCAN-ISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERSE 315
            +    EEL   N         C N + V+P L ++I+  Q  D  ++++K+ + +G+   
Sbjct: 547  QPELYEELKHLN--LEIVNQGCVNALEVQPTLQSQIREKQLEDEDIKEIKKNMRRGKAPG 604

Query: 314  FSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMKN 135
            FS  E G + F NRICVP+ ++L+  IL EAH S Y+IHPG  KMY+DLK+ YWWV+MK 
Sbjct: 605  FSEDEQGTVWFGNRICVPNQQELKQSILKEAHESPYSIHPGSTKMYQDLKEKYWWVSMKR 664

Query: 134  QVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            ++AEFVA C  CQRVKAEHQRP+GLLQPL IPEWKWE I MDF+
Sbjct: 665  EIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFI 708


>gb|EOY19685.1| DNA/RNA polymerases superfamily protein, putative [Theobroma cacao]
          Length = 1347

 Score =  247 bits (631), Expect = 2e-63
 Identities = 127/225 (56%), Positives = 157/225 (69%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKYL +QKELNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+S  LA L   
Sbjct: 794  DHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHPGKANVVADALSRKSSSSLAALQSC 853

Query: 491  EWRSLEELSTWN-PIRTSTRISC-ANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
             + +L E+ +    +R     S  AN  V+P LLN+IK  Q  D +L+K  +K+  G  S
Sbjct: 854  YFSALIEMKSLGVQLRNGEDGSVLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVS 913

Query: 317  EFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMK 138
            EF   ED V+ FR+R+CVP   QLR  I+ EAH S Y ++PG  KMY+ ++++YWW  MK
Sbjct: 914  EFRFGEDNVLMFRDRVCVPEGNQLRQTIMEEAHSSAYALNPGSTKMYRTIRENYWWPGMK 973

Query: 137  NQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
              VAEFVA+CL CQ+VKAEHQRP G  Q L + EWKWEH+TMDFV
Sbjct: 974  RDVAEFVAKCLVCQQVKAEHQRPVGTFQSLPVLEWKWEHVTMDFV 1018


>gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
          Length = 1501

 Score =  245 bits (626), Expect = 8e-63
 Identities = 121/228 (53%), Positives = 166/228 (72%), Gaps = 7/228 (3%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKY+F+QK+LN+RQRRW+ELI+DY  DIQYH GKANVVADALSRK+S  L+ L++ 
Sbjct: 923  DHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLSTLIVP 982

Query: 491  E--WRSLEELST--WNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGE 324
            E   R ++ L+    NP  +  R+S  N+S+   + +EI   Q  D  L K+KEK+ +G+
Sbjct: 983  EELCRDMKRLNLEILNPGESEARLS--NLSLGVSIFDEIIEGQVGDEHLDKIKEKMKQGK 1040

Query: 323  RSEFSIPEDGVIRFRNRICVPSD-EQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWV 147
              +F I EDG +RF+ R CVP     L+ R++ E H + Y++HPGG+K+YKDLK  YWW 
Sbjct: 1041 EIDFKIHEDGSLRFKGRWCVPQKCNDLKRRLMDEGHNTPYSVHPGGDKLYKDLKVIYWWP 1100

Query: 146  NMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            NMK +VAE+V++CLTCQ+VK +H+RP G +QPL +P WKW+ I+MDFV
Sbjct: 1101 NMKREVAEYVSKCLTCQKVKIDHKRPMGTVQPLEVPGWKWDSISMDFV 1148


>gb|AEV42258.1| hypothetical protein [Beta vulgaris]
          Length = 1553

 Score =  244 bits (623), Expect = 2e-62
 Identities = 118/229 (51%), Positives = 167/229 (72%), Gaps = 8/229 (3%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS-------LA 507
            DHKSLKY+F+QK+LN+RQRRW+ELI+DY  DIQYH GKANVVADALSRK+S       +A
Sbjct: 955  DHKSLKYIFTQKDLNMRQRRWLELIKDYDLDIQYHEGKANVVADALSRKSSHSLNTLVVA 1014

Query: 506  RLMIREWRSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKG 327
              +  E+  L+ +   +       +S   ++++P+ L EI+ +Q  DV+L+++K K+ +G
Sbjct: 1015 DKLCEEFSRLQ-IEVVHEGEVERLLSA--LTIEPNFLEEIRASQPGDVKLERVKAKLKEG 1071

Query: 326  ERSEFSIPEDGVIRFRNRICVPSD-EQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWW 150
            +   F+I EDG IR++ R CVP   E+L+ +I+SE H + Y +HPGG+K+YKDLK+ +WW
Sbjct: 1072 KAEGFAIHEDGSIRYKGRWCVPQKCEELKQKIMSEGHNTTYYVHPGGDKLYKDLKKMFWW 1131

Query: 149  VNMKNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
              MK  VAEFV++CLTCQ+VK+EH+RP G +QPL IP WKW+ I+MDFV
Sbjct: 1132 PGMKRAVAEFVSKCLTCQKVKSEHKRPQGKIQPLDIPTWKWDSISMDFV 1180


>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1515

 Score =  243 bits (619), Expect = 5e-62
 Identities = 124/225 (55%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKAS--LARLMIR 492
            DHKSLKYL +QKELNLRQRRW+ELI+DY   I YH GKANVVADALSRK+S  LA L   
Sbjct: 940  DHKSLKYLLTQKELNLRQRRWLELIKDYDLVIDYHLGKANVVADALSRKSSSSLAALQSC 999

Query: 491  EWRSLEELSTWN-PIRTSTRISC-ANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
             + +L E+ +    +R     S  AN  V+P LLN+IK  Q  D +L+K  +K+  G  S
Sbjct: 1000 YFPALIEMKSLGVQLRNGEDGSLLANFIVRPSLLNQIKDIQRSDDELRKEIQKLTDGGVS 1059

Query: 317  EFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMK 138
            EF   ED V+ F++R+CVP   QLR  I+ EAH S Y +HPG  KMY+ ++++YWW  MK
Sbjct: 1060 EFRFGEDNVLMFKDRVCVPEGNQLRQAIMEEAHSSAYALHPGSTKMYRTIRENYWWPGMK 1119

Query: 137  NQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
              VAEF+A+CL CQ+VKAEHQR    LQ L +PEWKWEH+TMDF+
Sbjct: 1120 RDVAEFIAKCLVCQQVKAEHQRLVDTLQSLPVPEWKWEHVTMDFI 1164


>emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group]
          Length = 1324

 Score =  243 bits (619), Expect = 5e-62
 Identities = 120/225 (53%), Positives = 156/225 (69%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIR-- 492
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+    L +R  
Sbjct: 744  DHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVADALSRKSHCNTLNVRGI 803

Query: 491  --EWRSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
              E     E    + +R   R   A +  KP LL++I+  Q  D  ++ L + + +G+ +
Sbjct: 804  PPELNQQMEALNLSIVR---RGFLATLEAKPTLLDQIREAQKNDPDMRGLLKNMKQGKAA 860

Query: 317  EFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMK 138
             F+  E G +   NR+CVP D++L+  IL EAH S Y+IHPG  KMY DLK+ YWWV+MK
Sbjct: 861  GFTEDEHGTLWNGNRVCVPDDKELKQLILQEAHESPYSIHPGSTKMYLDLKEKYWWVSMK 920

Query: 137  NQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
             ++AEFVA C  CQRVKAEHQRP+GLLQPL++PEWKW+ I MDF+
Sbjct: 921  REIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDEIGMDFI 965


>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
          Length = 1573

 Score =  242 bits (617), Expect = 8e-62
 Identities = 122/226 (53%), Positives = 161/226 (71%), Gaps = 5/226 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKA--SLARLMIR 492
            DHKSLKY+F+QK+LN RQRRWME +EDY F + YHPGKANVVADALSRK+   L  L +R
Sbjct: 1050 DHKSLKYIFTQKDLNSRQRRWMETLEDYDFALHYHPGKANVVADALSRKSYGQLFSLGLR 1109

Query: 491  EWRSLEELSTWNPIRTST-RISCA-NISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
            E+     +  +        R  C  +IS +P ++  I   Q  D  L+K+K +++ GE  
Sbjct: 1110 EFEMYAVIEDFELCLVQEGRGPCLYSISARPMVIQRIVEAQVHDEFLEKVKAQLVAGEID 1169

Query: 317  E-FSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNM 141
            E +S+ EDG +RF+ R+CVP D +LRN +L++AHR+KYTIHPG  KMY+DLK+ + W  M
Sbjct: 1170 ENWSMYEDGSVRFKGRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFXWSGM 1229

Query: 140  KNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            K  +A+FVA C  CQ+VKAEHQRP+ LLQPL IP+WKW++ITMDFV
Sbjct: 1230 KRDIAQFVANCQICQQVKAEHQRPAELLQPLPIPKWKWDNITMDFV 1275


>emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group]
          Length = 1510

 Score =  242 bits (617), Expect = 8e-62
 Identities = 115/222 (51%), Positives = 157/222 (70%), Gaps = 1/222 (0%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+  A L I   
Sbjct: 936  DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCAALCIESM 995

Query: 485  -RSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERSEFS 309
               L +      +        A +  +P L+++++  Q  D ++ +LK+ +  G+  +F 
Sbjct: 996  CEELRQEFEHLNVGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGKARDFH 1055

Query: 308  IPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMKNQV 129
              E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M+ ++
Sbjct: 1056 EDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREI 1115

Query: 128  AEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            AEFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1116 AEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1157


>gb|ABC94893.1| polyprotein [Oryza australiensis]
          Length = 1469

 Score =  242 bits (617), Expect = 8e-62
 Identities = 119/223 (53%), Positives = 153/223 (68%), Gaps = 2/223 (0%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRKA    + +   
Sbjct: 904  DHKSLKYFFTQPDLNLRQRRWLELIKDYDLGIHYHPGKANVVADALSRKAQCNHMGLGNM 963

Query: 485  RS--LEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERSEF 312
             S   EE++  N +         ++ V+P L  +I+  Q  + + Q++KE++  G   EF
Sbjct: 964  ASELQEEMAKLN-LHLIPHGEVNSLEVRPLLRTQIEEAQRGNEETQEIKERMAAGRAQEF 1022

Query: 311  SIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMKNQ 132
            S+ + G++ ++ RICVP    LR  IL EAH S Y++HPG  KMY+DLK  YWW NMK  
Sbjct: 1023 SVDDKGILWYKKRICVPERGGLRELILKEAHESAYSLHPGSTKMYQDLKGEYWWPNMKRD 1082

Query: 131  VAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            VAE+VA C  CQRVKAEHQRP+GLLQPL+IPEWKW+ I MDF+
Sbjct: 1083 VAEYVAVCDVCQRVKAEHQRPAGLLQPLKIPEWKWDEIGMDFI 1125


>gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|108708868|gb|ABF96663.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1760

 Score =  242 bits (617), Expect = 8e-62
 Identities = 117/225 (52%), Positives = 158/225 (70%), Gaps = 4/225 (1%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARL----M 498
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+  A L    M
Sbjct: 1186 DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCAALCIEGM 1245

Query: 497  IREWRSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERS 318
              E R   E      +        A +  +P L+++++  Q  D ++ +LK+ +  G+  
Sbjct: 1246 CEELRQEFEHLNVGIVELGF---VAALEARPTLVDQVRAAQANDSEIAELKKNMRVGKAR 1302

Query: 317  EFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMK 138
            +F   E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M+
Sbjct: 1303 DFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMR 1362

Query: 137  NQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
             ++AEFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1363 REIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1407


>gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1521

 Score =  241 bits (615), Expect = 1e-61
 Identities = 116/226 (51%), Positives = 160/226 (70%), Gaps = 5/226 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+    L I + 
Sbjct: 947  DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEDM 1006

Query: 485  -----RSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGER 321
                 + LE L+    +        A +  +P L+++++  Q  D ++ +LK+ +  G+ 
Sbjct: 1007 CEELRQELEHLN----MGIVEHGFVAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGKA 1062

Query: 320  SEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNM 141
             +F   E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M
Sbjct: 1063 RDFLEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSM 1122

Query: 140  KNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            + ++AEFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1123 RREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1168


>emb|CAH66288.1| OSIGBa0161P06.5 [Oryza sativa Indica Group]
          Length = 1471

 Score =  241 bits (615), Expect = 1e-61
 Identities = 116/226 (51%), Positives = 159/226 (70%), Gaps = 5/226 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+    L I   
Sbjct: 897  DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIESM 956

Query: 485  -----RSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGER 321
                 + LE L+    +        A +  +P L+++++  Q  D ++ +LK+ +  G+ 
Sbjct: 957  CEELRQELEHLN----MGVVEHGFVAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGKA 1012

Query: 320  SEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNM 141
             +F   E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M
Sbjct: 1013 RDFHEDEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSM 1072

Query: 140  KNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            + ++AEFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1073 RREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1118


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  241 bits (615), Expect = 1e-61
 Identities = 117/226 (51%), Positives = 159/226 (70%), Gaps = 5/226 (2%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRK-----ASLARL 501
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK     A + +L
Sbjct: 974  DHKSLKYIFTQADLNLRQRRWLELIKDYDMGIHYHPGKANVVADALSRKSYCNVAWVEQL 1033

Query: 500  MIREWRSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGER 321
                 R LE L+    +        A +  +P L+ ++++ Q  D ++ +LK+ +  GE 
Sbjct: 1034 CCEVQRDLEHLN----LGIVEHGFVAALEAQPTLVEQVRIAQASDPEIAELKKNMRVGEA 1089

Query: 320  SEFSIPEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNM 141
              F   E G I    R+CVP +++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M
Sbjct: 1090 RGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSM 1149

Query: 140  KNQVAEFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            + ++AEFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1150 RREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1195


>gb|AAV25060.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53982137|gb|AAV25233.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1765

 Score =  241 bits (615), Expect = 1e-61
 Identities = 114/221 (51%), Positives = 155/221 (70%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+    L I   
Sbjct: 1203 DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGM 1262

Query: 485  RSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERSEFSI 306
              + E               A +  +P L+++++  Q  D ++ +LK+ +  G+  +F  
Sbjct: 1263 CEIAEHGF-----------VAALEARPTLVDQVRAAQVNDPEIAELKKNMRVGKARDFHE 1311

Query: 305  PEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMKNQVA 126
             E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M+ ++A
Sbjct: 1312 DEHGTIWMGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIA 1371

Query: 125  EFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            EFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1372 EFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1412


>gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77548986|gb|ABA91783.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1760

 Score =  241 bits (614), Expect = 2e-61
 Identities = 116/221 (52%), Positives = 156/221 (70%)
 Frame = -2

Query: 665  DHKSLKYLFSQKELNLRQRRWMELIEDYHFDIQYHPGKANVVADALSRKASLARLMIREW 486
            DHKSLKY+F+Q +LNLRQRRW+ELI+DY   I YHPGKANVVADALSRK+    L I   
Sbjct: 1200 DHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGM 1259

Query: 485  RSLEELSTWNPIRTSTRISCANISVKPDLLNEIKVTQGIDVQLQKLKEKILKGERSEFSI 306
               EEL              A +  +P L+++++  Q  D ++ +LK+ +  G+  +F  
Sbjct: 1260 --CEELRF-----------VAALEARPTLVDQVRAAQVNDSEIAELKKNMRVGKARDFHE 1306

Query: 305  PEDGVIRFRNRICVPSDEQLRNRILSEAHRSKYTIHPGGNKMYKDLKQHYWWVNMKNQVA 126
             E G I    R+CVP D++L++ IL+EAH+++Y+IHPG  KMY+DLK+ +WWV+M+ ++A
Sbjct: 1307 DEHGTIWLGERLCVPDDKELKDLILTEAHQTQYSIHPGSTKMYQDLKEKFWWVSMRREIA 1366

Query: 125  EFVARCLTCQRVKAEHQRPSGLLQPLRIPEWKWEHITMDFV 3
            EFVA C  CQRVKAEHQRP+GLLQPL+IPEWKWE I MDF+
Sbjct: 1367 EFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWEEIGMDFI 1407