BLASTX nr result
ID: Rehmannia23_contig00017757
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00017757
(490 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 145 5e-33
gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao] 145 7e-33
ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi... 143 2e-32
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi... 143 3e-32
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 141 1e-31
gb|EMJ26960.1| hypothetical protein PRUPE_ppa004469mg [Prunus pe... 140 2e-31
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi... 139 3e-31
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi... 137 2e-30
gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis] 136 3e-30
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr... 135 6e-30
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 135 6e-30
ref|XP_006604957.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou... 133 3e-29
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi... 131 1e-28
gb|ESW26894.1| hypothetical protein PHAVU_003G157400g [Phaseolus... 130 1e-28
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi... 130 2e-28
ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Popu... 129 3e-28
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 129 4e-28
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ... 129 4e-28
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 129 4e-28
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 129 4e-28
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp.
melo]
Length = 519
Score = 145 bits (366), Expect = 5e-33
Identities = 69/106 (65%), Positives = 83/106 (78%)
Frame = +1
Query: 172 QPQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKN 351
QP E+PDPK+ KMS+TTT+ D+E+ ++ VAIFFAYCGVGYQGMQKN
Sbjct: 15 QPLIEEPDPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKN 74
Query: 352 PGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
PGAKTIE DLEEALY +GA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 75 PGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV 120
>gb|EOY18823.1| Pseudouridine synthase [Theobroma cacao]
Length = 507
Score = 145 bits (365), Expect = 7e-33
Identities = 71/105 (67%), Positives = 82/105 (78%)
Frame = +1
Query: 175 PQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNP 354
P ++PDPKR KMSTTTTS DEE ++ +AIFFAYCGVGYQGMQKNP
Sbjct: 20 PTTQEPDPKRLKMSTTTTSDDEET-ASATNGTKKQRYKRRKIAIFFAYCGVGYQGMQKNP 78
Query: 355 GAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
GAKTIEGDLEEAL+ SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 79 GAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARSARTDKGVSAV 123
>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
vinifera]
Length = 503
Score = 143 bits (361), Expect = 2e-32
Identities = 69/102 (67%), Positives = 82/102 (80%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
++PDPKR KMS TTT+ D+E+ + + +AIFFAYCGVGYQGMQKNPGAK
Sbjct: 4 QEPDPKRPKMSQTTTTSDDEDCDTTTATKKPRYKRRK-IAIFFAYCGVGYQGMQKNPGAK 62
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEGDLEEAL+FSGA+PE++RG +RFDWARSARTDKGVSAV
Sbjct: 63 TIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAV 104
>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Cucumis sativus]
Length = 519
Score = 143 bits (360), Expect = 3e-32
Identities = 68/106 (64%), Positives = 82/106 (77%)
Frame = +1
Query: 172 QPQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKN 351
QP E+P PK+ KMS+TTT+ D+E+ ++ VAIFFAYCGVGYQGMQKN
Sbjct: 15 QPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKN 74
Query: 352 PGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
PGAKTIE DLEEALY +GA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 75 PGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV 120
>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 141 bits (355), Expect = 1e-31
Identities = 67/106 (63%), Positives = 81/106 (76%)
Frame = +1
Query: 172 QPQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKN 351
QP E+P PK+ KMS+TTT+ D+E+ ++ VA FFAYCGVGYQGMQKN
Sbjct: 15 QPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAXFFAYCGVGYQGMQKN 74
Query: 352 PGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
PGAKTIE DLEEALY +GA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 75 PGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV 120
>gb|EMJ26960.1| hypothetical protein PRUPE_ppa004469mg [Prunus persica]
Length = 508
Score = 140 bits (353), Expect = 2e-31
Identities = 69/108 (63%), Positives = 80/108 (74%)
Frame = +1
Query: 166 SFQPQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQ 345
+ P ++PDPK+ KMSTTTTS D+E + VAIFFAYCGVGYQGMQ
Sbjct: 9 TISPPPQEPDPKKLKMSTTTTSDDDET--TTTDTTKKQRYKRRKVAIFFAYCGVGYQGMQ 66
Query: 346 KNPGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
KNPGAKTIEGDLEEALY S A+PE++R +R+DWARSARTDKGVSAV
Sbjct: 67 KNPGAKTIEGDLEEALYLSNAVPEQDRNNPKRYDWARSARTDKGVSAV 114
>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Fragaria vesca subsp. vesca]
Length = 591
Score = 139 bits (351), Expect = 3e-31
Identities = 70/105 (66%), Positives = 81/105 (77%)
Frame = +1
Query: 175 PQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNP 354
P ++QPDPK+ KMSTTTT DE+ ++ VAIFFAYCGVGYQGMQKNP
Sbjct: 17 PPQQQPDPKKLKMSTTTTD-DEQTAATTQKQRLKRRK----VAIFFAYCGVGYQGMQKNP 71
Query: 355 GAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
GAKTIEGDLEEALY SGA+PE++R +R+DWARSARTDKGVSAV
Sbjct: 72 GAKTIEGDLEEALYLSGAVPEQDRSNPKRYDWARSARTDKGVSAV 116
>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Citrus sinensis]
Length = 526
Score = 137 bits (344), Expect = 2e-30
Identities = 71/112 (63%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
Frame = +1
Query: 166 SFQPQEEQPDPKRQKMSTTTTSGDEEN----HENSEXXXXXXXXXXXXVAIFFAYCGVGY 333
S P++E PDPKR KMS TTTS DE + ++ +AIFFAYCGVGY
Sbjct: 15 SLSPRQE-PDPKRLKMSATTTSDDERDLIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGY 73
Query: 334 QGMQKNPGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
QGMQKNPGAKTIEGDLEEAL+ SGA+ E +RG RR+DWARSARTDKGVSAV
Sbjct: 74 QGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAV 125
>gb|EXB88225.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 621
Score = 136 bits (342), Expect = 3e-30
Identities = 69/105 (65%), Positives = 79/105 (75%)
Frame = +1
Query: 175 PQEEQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNP 354
P E+PD K+ KMST+TTS DEE + +AIFFAYCGVGYQGMQKNP
Sbjct: 18 PPPEEPDAKKLKMSTSTTSDDEEMTTGNAKKERYKRRK---IAIFFAYCGVGYQGMQKNP 74
Query: 355 GAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
GAKTIEGDLEEALY SGA+PE++R +R+DWARSARTDKGVSAV
Sbjct: 75 GAKTIEGDLEEALYLSGAVPEQDRYCPKRYDWARSARTDKGVSAV 119
>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
gi|557537401|gb|ESR48519.1| hypothetical protein
CICLE_v10000838mg [Citrus clementina]
Length = 526
Score = 135 bits (340), Expect = 6e-30
Identities = 70/112 (62%), Positives = 81/112 (72%), Gaps = 4/112 (3%)
Frame = +1
Query: 166 SFQPQEEQPDPKRQKMSTTTTSGDEEN----HENSEXXXXXXXXXXXXVAIFFAYCGVGY 333
S P++E PDPKR KMS T+TS DE + ++ +AIFFAYCGVGY
Sbjct: 15 SLSPRQE-PDPKRLKMSATSTSDDERDLIPAAAGADSTTKRQLCKRRKIAIFFAYCGVGY 73
Query: 334 QGMQKNPGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
QGMQKNPGAKTIEGDLEEAL+ SGA+ E +RG RR+DWARSARTDKGVSAV
Sbjct: 74 QGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSARTDKGVSAV 125
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 548
Score = 135 bits (340), Expect = 6e-30
Identities = 70/102 (68%), Positives = 78/102 (76%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P+PK+ KMSTTT S DEE VAIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPEPKKLKMSTTT-SDDEETGTKKRYKRRK-------VAIFFAYCGVGYQGMQKNPGAK 73
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEGDLEEALY SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 74 TIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAV 115
>ref|XP_006604957.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase 1-like
[Glycine max]
Length = 471
Score = 133 bits (334), Expect = 3e-29
Identities = 66/102 (64%), Positives = 78/102 (76%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P+PK+ KMSTTT+ ++ E + VAIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPEPKKLKMSTTTS----DDEECAAGTGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAK 77
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEGDLEE LY SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 78 TIEGDLEEVLYVSGAVPEQDRGVPKRYDWARSARTDKGVSAV 119
>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Solanum tuberosum]
Length = 569
Score = 131 bits (329), Expect = 1e-28
Identities = 66/105 (62%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEE---NHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNP 354
E+P PK+ KMSTTTTS DEE + VAIFFAYCGVGYQGMQKNP
Sbjct: 12 EEPQPKKLKMSTTTTSDDEEYAAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNP 71
Query: 355 GAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
GAKTIEGDLEEALY +G +P+ ++ Q R+++WARSARTDKGVSAV
Sbjct: 72 GAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAV 116
>gb|ESW26894.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
gi|561028256|gb|ESW26896.1| hypothetical protein
PHAVU_003G157400g [Phaseolus vulgaris]
Length = 586
Score = 130 bits (328), Expect = 1e-28
Identities = 65/102 (63%), Positives = 77/102 (75%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P+PK+ KMSTT+ ++ E + +AIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPEPKKLKMSTTS-----DDEECTTAPGAKKRYKRRKIAIFFAYCGVGYQGMQKNPGAK 76
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEGDLEEALY SGA+PE +RG +R+DWARSARTDKGVSAV
Sbjct: 77 TIEGDLEEALYVSGAVPEHDRGIPKRYDWARSARTDKGVSAV 118
>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
[Solanum lycopersicum]
Length = 598
Score = 130 bits (327), Expect = 2e-28
Identities = 65/104 (62%), Positives = 77/104 (74%), Gaps = 2/104 (1%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDE--ENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPG 357
E+P PK+QKMSTTTTS +E + VAIFFAYCGVGYQGMQKNPG
Sbjct: 12 EEPQPKKQKMSTTTTSDEEYAAGAGDGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPG 71
Query: 358 AKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
AKTIEGDLEEALY +G +P+ ++ Q R+++WARSARTDKGVSAV
Sbjct: 72 AKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAV 115
>ref|XP_002300673.2| hypothetical protein POPTR_0002s01580g [Populus trichocarpa]
gi|550344062|gb|EEE79946.2| hypothetical protein
POPTR_0002s01580g [Populus trichocarpa]
Length = 516
Score = 129 bits (325), Expect = 3e-28
Identities = 63/107 (58%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
Frame = +1
Query: 175 PQEEQPDPKRQKMSTTTTSGDEENH--ENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQK 348
P +++PD K+ KMSTTT+ ++ + +AIFFAYCGVGYQGMQK
Sbjct: 13 PPQQEPDLKKPKMSTTTSDDEDAATMTPGGDTTTKKQRYKRRKIAIFFAYCGVGYQGMQK 72
Query: 349 NPGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
NPGAKTIEGDLEEAL+ +GA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 73 NPGAKTIEGDLEEALFHAGAVPEQDRGIPKRYDWARSARTDKGVSAV 119
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1|
unknown [Medicago truncatula]
Length = 530
Score = 129 bits (324), Expect = 4e-28
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P K+ KMSTTT+ D+E +E VAIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPATKKVKMSTTTS--DDEGCTTAEGSKVRYKRRK--VAIFFAYCGVGYQGMQKNPGAK 77
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEG+LEEALY SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 78 TIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAV 119
>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 584
Score = 129 bits (324), Expect = 4e-28
Identities = 65/108 (60%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +1
Query: 175 PQEEQPDPKRQKMSTTTTSGDE---ENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQ 345
P +E+P+ KR +MSTTT+ +E + +AIFFAYCGVGYQGMQ
Sbjct: 12 PPQEEPERKRPRMSTTTSDEEEIATTAPGDEAATVKKQRYKRRKMAIFFAYCGVGYQGMQ 71
Query: 346 KNPGAKTIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
KNPGAKTIEGDLEEAL+ SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 72 KNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARSARTDKGVSAV 119
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 129 bits (324), Expect = 4e-28
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P K+ KMSTTT+ D+E +E VAIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPATKKVKMSTTTS--DDEGCTTAEGSKVRYKRRK--VAIFFAYCGVGYQGMQKNPGAK 77
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEG+LEEALY SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 78 TIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAV 119
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 129 bits (324), Expect = 4e-28
Identities = 67/102 (65%), Positives = 78/102 (76%)
Frame = +1
Query: 184 EQPDPKRQKMSTTTTSGDEENHENSEXXXXXXXXXXXXVAIFFAYCGVGYQGMQKNPGAK 363
E+P K+ KMSTTT+ D+E +E VAIFFAYCGVGYQGMQKNPGAK
Sbjct: 22 EEPATKKVKMSTTTS--DDEGCTTAEGSKVRYKRRK--VAIFFAYCGVGYQGMQKNPGAK 77
Query: 364 TIEGDLEEALYFSGAIPEEERGQHRRFDWARSARTDKGVSAV 489
TIEG+LEEALY SGA+PE++RG +R+DWARSARTDKGVSAV
Sbjct: 78 TIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAV 119