BLASTX nr result
ID: Rehmannia23_contig00016436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00016436
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002313317.2| hypothetical protein POPTR_0009s06340g [Popu... 120 2e-25
ref|XP_002517779.1| pentatricopeptide repeat-containing protein,... 112 7e-23
ref|XP_006344375.1| PREDICTED: pentatricopeptide repeat-containi... 111 9e-23
gb|EPS58661.1| hypothetical protein M569_16151 [Genlisea aurea] 111 9e-23
ref|XP_004244962.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
ref|XP_004244961.1| PREDICTED: pentatricopeptide repeat-containi... 109 4e-22
ref|XP_006403718.1| hypothetical protein EUTSA_v10011131mg, part... 107 2e-21
gb|EMJ20528.1| hypothetical protein PRUPE_ppa019225mg, partial [... 107 2e-21
ref|XP_006290968.1| hypothetical protein CARUB_v10017083mg [Caps... 105 6e-21
ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containi... 105 6e-21
ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|NP_190885.5| pentatricopeptide repeat-containing protein [Ar... 104 1e-20
emb|CBI24939.3| unnamed protein product [Vitis vinifera] 104 1e-20
sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-c... 104 1e-20
ref|XP_004308684.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_002877905.1| pentatricopeptide repeat-containing protein ... 103 2e-20
gb|EXB68332.1| hypothetical protein L484_004678 [Morus notabilis] 100 3e-19
gb|EXB68330.1| hypothetical protein L484_004676 [Morus notabilis] 100 3e-19
ref|XP_003599420.1| Pentatricopeptide repeat-containing protein ... 94 1e-17
ref|XP_006492786.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
>ref|XP_002313317.2| hypothetical protein POPTR_0009s06340g [Populus trichocarpa]
gi|550331160|gb|EEE87272.2| hypothetical protein
POPTR_0009s06340g [Populus trichocarpa]
Length = 483
Score = 120 bits (300), Expect = 2e-25
Identities = 58/77 (75%), Positives = 68/77 (88%)
Frame = -3
Query: 233 PQPQSPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWE 54
P P S ++ SKK+LSRILRTE+AIKAIE+KANS KYNNL PKAVLEAL+DAIK+N+WE
Sbjct: 47 PDPTSTGLQRQSKKELSRILRTEAAIKAIEQKANSKKYNNLWPKAVLEALDDAIKENQWE 106
Query: 53 SALKIFDLLRRQQWYEP 3
SALKIF+LLR+Q WYEP
Sbjct: 107 SALKIFELLRKQHWYEP 123
>ref|XP_002517779.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543051|gb|EEF44586.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 112 bits (279), Expect = 7e-23
Identities = 57/105 (54%), Positives = 75/105 (71%)
Frame = -3
Query: 317 LRLLNPANLRSSSIVKSYSKKNPDSDIYPQPQSPQFRKFSKKDLSRILRTESAIKAIERK 138
+++L N S + N SD+ P ++ +KK+LSR LRT++AIKAIE+K
Sbjct: 26 IKVLKERNFHSDPPILGIHSSNLSSDLIPVGP----KRHTKKELSRFLRTDAAIKAIEQK 81
Query: 137 ANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQQWYEP 3
A+SSKYN L PKAVLEAL+DAIK+ RW+SALKIF+LLR+Q WYEP
Sbjct: 82 ADSSKYNRLWPKAVLEALDDAIKERRWKSALKIFELLRKQHWYEP 126
>ref|XP_006344375.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Solanum tuberosum]
Length = 482
Score = 111 bits (278), Expect = 9e-23
Identities = 54/73 (73%), Positives = 63/73 (86%)
Frame = -3
Query: 221 SPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALK 42
S +K SKK+LSRILRTE+AI+ I+RKANS KY NL PKAVLEAL+DAI+ NRW+SALK
Sbjct: 30 SQGLQKCSKKNLSRILRTEAAIRGIQRKANSEKYTNLWPKAVLEALDDAIRDNRWDSALK 89
Query: 41 IFDLLRRQQWYEP 3
IFDLLR+Q WYEP
Sbjct: 90 IFDLLRKQHWYEP 102
>gb|EPS58661.1| hypothetical protein M569_16151 [Genlisea aurea]
Length = 433
Score = 111 bits (278), Expect = 9e-23
Identities = 60/91 (65%), Positives = 74/91 (81%)
Frame = -3
Query: 275 VKSYSKKNPDSDIYPQPQSPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAV 96
+KS S+K SDI +P S + R+ S+K+LS +LRT++A+KAI RKANSSKY NL PKAV
Sbjct: 17 IKSSSEK---SDI--EPGSFRSRRSSRKNLSLLLRTDAAVKAIRRKANSSKYTNLWPKAV 71
Query: 95 LEALNDAIKQNRWESALKIFDLLRRQQWYEP 3
LEAL+DAI+ N WESALKIF LLR+QQWYEP
Sbjct: 72 LEALDDAIELNHWESALKIFSLLRKQQWYEP 102
>ref|XP_004244962.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like isoform 2 [Solanum lycopersicum]
Length = 454
Score = 109 bits (272), Expect = 4e-22
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = -3
Query: 221 SPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALK 42
S +K SKK+LSRILRTE+AI+ I RKANS KY NL PKAVL+AL+DAI+ NRW+SALK
Sbjct: 31 SQGLQKCSKKNLSRILRTEAAIRGIHRKANSEKYTNLWPKAVLKALDDAIRDNRWDSALK 90
Query: 41 IFDLLRRQQWYEP 3
IFDLLR+Q WYEP
Sbjct: 91 IFDLLRKQHWYEP 103
>ref|XP_004244961.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like isoform 1 [Solanum lycopersicum]
Length = 466
Score = 109 bits (272), Expect = 4e-22
Identities = 53/73 (72%), Positives = 62/73 (84%)
Frame = -3
Query: 221 SPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALK 42
S +K SKK+LSRILRTE+AI+ I RKANS KY NL PKAVL+AL+DAI+ NRW+SALK
Sbjct: 31 SQGLQKCSKKNLSRILRTEAAIRGIHRKANSEKYTNLWPKAVLKALDDAIRDNRWDSALK 90
Query: 41 IFDLLRRQQWYEP 3
IFDLLR+Q WYEP
Sbjct: 91 IFDLLRKQHWYEP 103
>ref|XP_006403718.1| hypothetical protein EUTSA_v10011131mg, partial [Eutrema
salsugineum] gi|557104837|gb|ESQ45171.1| hypothetical
protein EUTSA_v10011131mg, partial [Eutrema salsugineum]
Length = 495
Score = 107 bits (266), Expect = 2e-21
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 7/115 (6%)
Frame = -3
Query: 326 AMELRLLNPANLRSSSIVK----SYSKKNPDSDI---YPQPQSPQFRKFSKKDLSRILRT 168
A++ + +PA R + V + S K P+ I P S + R KK+LSRILRT
Sbjct: 33 AVQQHISSPACFRHVTSVSVTPTTCSTKIPNERIGKMSPGLISTRHRVDPKKELSRILRT 92
Query: 167 ESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQQWYEP 3
++A+K IERKANS KYN L PKAVLEAL++AI +NRW+SALKIF+LLR+Q WYEP
Sbjct: 93 DAAVKGIERKANSEKYNTLWPKAVLEALDEAISENRWQSALKIFNLLRKQHWYEP 147
>gb|EMJ20528.1| hypothetical protein PRUPE_ppa019225mg, partial [Prunus persica]
Length = 473
Score = 107 bits (266), Expect = 2e-21
Identities = 62/123 (50%), Positives = 82/123 (66%), Gaps = 16/123 (13%)
Frame = -3
Query: 323 MELRLLNPANLRSSSIVK----SYS---------KKNPDSD---IYPQPQSPQFRKFSKK 192
ME LL+P NLR S+ +YS K+NP + + +P + +KK
Sbjct: 1 MEPHLLHPTNLRFSTSTSLTSATYSITLCGEHAHKRNPTIHCLHLSKRSSNPSLK--AKK 58
Query: 191 DLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQQW 12
+LSR+LRT++A++ IE+KANS+KYNNL PKAVLEAL++AI N WESALKIF LLR+Q W
Sbjct: 59 ELSRLLRTDAAVRNIEKKANSNKYNNLWPKAVLEALDEAIANNLWESALKIFGLLRKQHW 118
Query: 11 YEP 3
YEP
Sbjct: 119 YEP 121
>ref|XP_006290968.1| hypothetical protein CARUB_v10017083mg [Capsella rubella]
gi|482559675|gb|EOA23866.1| hypothetical protein
CARUB_v10017083mg [Capsella rubella]
Length = 495
Score = 105 bits (262), Expect = 6e-21
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = -3
Query: 221 SPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALK 42
S + R KK+LSRILR ESA+K IERKANS KY L PKAVLEAL++AIK+NRW+SALK
Sbjct: 66 STRHRVDPKKELSRILRAESAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALK 125
Query: 41 IFDLLRRQQWYEP 3
IF+LLR+Q WYEP
Sbjct: 126 IFNLLRKQHWYEP 138
>ref|XP_004135941.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
gi|449514880|ref|XP_004164505.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g53170-like [Cucumis sativus]
Length = 477
Score = 105 bits (262), Expect = 6e-21
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = -3
Query: 221 SPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALK 42
S ++ KK LSRILR ++AIKAIERKANS KYNNL PKAVLEAL++AI++N WE+ALK
Sbjct: 53 SDALQRDPKKGLSRILRRDAAIKAIERKANSKKYNNLWPKAVLEALDEAIQENLWETALK 112
Query: 41 IFDLLRRQQWYEP 3
IF LLR+QQWYEP
Sbjct: 113 IFGLLRQQQWYEP 125
>ref|XP_002273156.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Vitis vinifera]
Length = 538
Score = 104 bits (259), Expect = 1e-20
Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 19/126 (15%)
Frame = -3
Query: 323 MELRLLNPANLR-SSSIVKSYSKKNPDSDIYPQPQS-PQF-----------------RKF 201
ME LL+P +LR SSSI +Y+ + +P S P F ++
Sbjct: 1 MEPHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQ 60
Query: 200 SKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRR 21
KKDLSRILRTE+AI IERKANS KY+ L PKAVLEAL++AI++NR+ESALKIF LLR+
Sbjct: 61 PKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRK 120
Query: 20 QQWYEP 3
Q WYEP
Sbjct: 121 QHWYEP 126
>ref|NP_190885.5| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332645523|gb|AEE79044.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 499
Score = 104 bits (259), Expect = 1e-20
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = -3
Query: 197 KKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQ 18
KK+LSRILRT++A+K IERKANS KY L PKAVLEAL++AIK+NRW+SALKIF+LLR+Q
Sbjct: 78 KKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQ 137
Query: 17 QWYEP 3
WYEP
Sbjct: 138 HWYEP 142
>emb|CBI24939.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 104 bits (259), Expect = 1e-20
Identities = 66/126 (52%), Positives = 82/126 (65%), Gaps = 19/126 (15%)
Frame = -3
Query: 323 MELRLLNPANLR-SSSIVKSYSKKNPDSDIYPQPQS-PQF-----------------RKF 201
ME LL+P +LR SSSI +Y+ + +P S P F ++
Sbjct: 1 MEPHLLDPTSLRWSSSIPLTYTTCSLKVLKETKPTSNPPFLFVRAGKRSSGSSQNGLQRQ 60
Query: 200 SKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRR 21
KKDLSRILRTE+AI IERKANS KY+ L PKAVLEAL++AI++NR+ESALKIF LLR+
Sbjct: 61 PKKDLSRILRTEAAISGIERKANSRKYSTLWPKAVLEALDEAIRENRYESALKIFGLLRK 120
Query: 20 QQWYEP 3
Q WYEP
Sbjct: 121 QHWYEP 126
>sp|Q9SCP4.1|PP279_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g53170
gi|6630737|emb|CAB64220.1| nodulin / glutamate-ammonia
ligase-like protein [Arabidopsis thaliana]
Length = 447
Score = 104 bits (259), Expect = 1e-20
Identities = 49/65 (75%), Positives = 59/65 (90%)
Frame = -3
Query: 197 KKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQ 18
KK+LSRILRT++A+K IERKANS KY L PKAVLEAL++AIK+NRW+SALKIF+LLR+Q
Sbjct: 28 KKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQ 87
Query: 17 QWYEP 3
WYEP
Sbjct: 88 HWYEP 92
>ref|XP_004308684.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Fragaria vesca subsp. vesca]
Length = 462
Score = 103 bits (258), Expect = 2e-20
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -3
Query: 203 FSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLR 24
F++K+LSRILRTE+A+K IERKANS+KYNNL PK VLEAL++AI N WE+ALKIF LLR
Sbjct: 40 FTQKELSRILRTEAAVKNIERKANSNKYNNLWPKPVLEALDEAISNNLWENALKIFGLLR 99
Query: 23 RQQWYEP 3
+Q WYEP
Sbjct: 100 KQHWYEP 106
>ref|XP_002877905.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297323743|gb|EFH54164.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 439
Score = 103 bits (257), Expect = 2e-20
Identities = 49/65 (75%), Positives = 58/65 (89%)
Frame = -3
Query: 197 KKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDLLRRQ 18
KK+LSRILRT++A+K IERKANS KY L PKAVLEAL++AIK+NRW+SALKIF LLR+Q
Sbjct: 28 KKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKENRWQSALKIFHLLRKQ 87
Query: 17 QWYEP 3
WYEP
Sbjct: 88 HWYEP 92
>gb|EXB68332.1| hypothetical protein L484_004678 [Morus notabilis]
Length = 488
Score = 100 bits (248), Expect = 3e-19
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = -3
Query: 209 RKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDL 30
+K KKDLSRILRT++AI+ IERKANS KYNNL PK VLEAL+ AI+ N WE+ALKIF+L
Sbjct: 60 QKDHKKDLSRILRTDAAIRNIERKANSKKYNNLWPKPVLEALDQAIRNNYWETALKIFEL 119
Query: 29 LRRQQWYEP 3
LR Q WY P
Sbjct: 120 LRLQNWYTP 128
>gb|EXB68330.1| hypothetical protein L484_004676 [Morus notabilis]
Length = 445
Score = 100 bits (248), Expect = 3e-19
Identities = 49/69 (71%), Positives = 57/69 (82%)
Frame = -3
Query: 209 RKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDL 30
+K KKDLSRILRT++AI+ IERKANS KYNNL PK VLEAL+ AI+ N WE+ALKIF+L
Sbjct: 60 QKDHKKDLSRILRTDAAIRNIERKANSKKYNNLWPKPVLEALDQAIRNNYWETALKIFEL 119
Query: 29 LRRQQWYEP 3
LR Q WY P
Sbjct: 120 LRLQNWYTP 128
>ref|XP_003599420.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488468|gb|AES69671.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 511
Score = 94.4 bits (233), Expect = 1e-17
Identities = 52/94 (55%), Positives = 63/94 (67%)
Frame = -3
Query: 284 SSIVKSYSKKNPDSDIYPQPQSPQFRKFSKKDLSRILRTESAIKAIERKANSSKYNNLLP 105
SS + YS K +P +K KKDLSRILRTE+AIK +E KA S K+ L P
Sbjct: 42 SSSFRVYSLKRSS-----KPSYEGLQKDPKKDLSRILRTEAAIKGVENKAKSWKHKQLWP 96
Query: 104 KAVLEALNDAIKQNRWESALKIFDLLRRQQWYEP 3
KAVLEAL+DAIK +W++AL IF+LLR Q WYEP
Sbjct: 97 KAVLEALDDAIKGCQWQNALMIFELLRNQYWYEP 130
>ref|XP_006492786.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Citrus sinensis]
Length = 471
Score = 93.6 bits (231), Expect = 2e-17
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = -3
Query: 209 RKFSKKDLSRILRTESAIKAIERKANSSKYNNLLPKAVLEALNDAIKQNRWESALKIFDL 30
+K ++KDLS+ILRTE AIK IE+K +S KY NL PK VLEAL++AIKQ +W+ ALKIF L
Sbjct: 44 QKEAEKDLSKILRTEFAIKNIEKKVSSKKYKNLWPKPVLEALDEAIKQKKWQLALKIFGL 103
Query: 29 LRRQQWYE 6
LR+QQWY+
Sbjct: 104 LRQQQWYQ 111