BLASTX nr result

ID: Rehmannia23_contig00016348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00016348
         (385 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338615.1| PREDICTED: F-box/LRR-repeat protein 4-like [...    83   4e-14
ref|XP_004232328.1| PREDICTED: F-box/LRR-repeat protein 7-like [...    82   6e-14
gb|EXC20342.1| F-box/LRR-repeat protein 4 [Morus notabilis]            75   9e-12
gb|EOY02499.1| RNI-like superfamily protein [Theobroma cacao]          63   4e-08
ref|XP_004158325.1| PREDICTED: F-box/LRR-repeat protein 7-like [...    63   5e-08
ref|XP_004141109.1| PREDICTED: F-box/LRR-repeat protein 7-like [...    63   5e-08
ref|XP_004304643.1| PREDICTED: F-box/LRR-repeat protein 7-like i...    62   8e-08
ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F...    62   8e-08
ref|XP_004304644.1| PREDICTED: F-box/LRR-repeat protein 7-like i...    58   2e-06
ref|XP_006387920.1| hypothetical protein POPTR_0479s00200g [Popu...    57   2e-06
ref|XP_002323795.1| hypothetical protein POPTR_0017s10600g [Popu...    57   2e-06
ref|XP_006663383.1| PREDICTED: F-box/LRR-repeat protein 20-like ...    57   3e-06
ref|XP_006470246.1| PREDICTED: F-box/LRR-repeat protein 3-like [...    57   3e-06
gb|ESW12939.1| hypothetical protein PHAVU_008G154600g [Phaseolus...    57   3e-06
ref|XP_006446584.1| hypothetical protein CICLE_v10015079mg [Citr...    56   4e-06

>ref|XP_006338615.1| PREDICTED: F-box/LRR-repeat protein 4-like [Solanum tuberosum]
          Length = 460

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 49/106 (46%), Positives = 61/106 (57%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD++LCDELLQEIF R+PPPS+AAV+LV K                      P  I  FS
Sbjct: 3   MDSILCDELLQEIFRRLPPPSAAAVSLVCKRWLHLLRSSTTSLSVCL---IEPPFIPLFS 59

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           +FL+ HPFLS++ +             D LL ++ASSCPNLRHLRF
Sbjct: 60  SFLSFHPFLSTVSV----TITPTVDSSDQLLNSVASSCPNLRHLRF 101


>ref|XP_004232328.1| PREDICTED: F-box/LRR-repeat protein 7-like [Solanum lycopersicum]
          Length = 458

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 49/106 (46%), Positives = 61/106 (57%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD++LCDELLQEIF R+PPPS+A+V+LV K                F        I  FS
Sbjct: 1   MDSILCDELLQEIFRRLPPPSAASVSLVCKRWLHLLRSSTTSLSICF---IETPLIPLFS 57

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           +FL+ HPFLS+L +             D LL ++ASSCPNLRHLRF
Sbjct: 58  SFLSFHPFLSTLSV----TITHTLDSSDQLLNSVASSCPNLRHLRF 99


>gb|EXC20342.1| F-box/LRR-repeat protein 4 [Morus notabilis]
          Length = 472

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD LLCDELLQEIF ++PP SS++V+LVSK                  LP NPT + S S
Sbjct: 1   MDNLLCDELLQEIFQKLPPCSSSSVSLVSKRWLQLYRTSRTSLSLRLSLP-NPTTLQSLS 59

Query: 198 AFLTQHPFLSSLFI----XXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           + L+ +PFL SL +                 D LLL I+S CP+L  LRF
Sbjct: 60  SLLSHYPFLLSLSLLLPSETPATTATTTAFSDHLLLLISSLCPHLHGLRF 109


>gb|EOY02499.1| RNI-like superfamily protein [Theobroma cacao]
          Length = 470

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 46/114 (40%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPP--PSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITS 191
           MDT+LCDELLQEIF R+P    SS +V+LVSK                F LP+  + I S
Sbjct: 1   MDTMLCDELLQEIFRRLPSTLSSSLSVSLVSKRWLNLYRSSKTSLSLRF-LPH-ASVIDS 58

Query: 192 FSAFLTQHPFLSSLFIXXXXXXXXXXXXE------DPLLLTIASSCPNLRHLRF 335
            S+ L+ +P LSSL +                   D LLL ++S C NL HLRF
Sbjct: 59  LSSLLSYYPSLSSLSLVLSDATTDSTSKNSSTAFYDHLLLVVSSCCSNLHHLRF 112


>ref|XP_004158325.1| PREDICTED: F-box/LRR-repeat protein 7-like [Cucumis sativus]
          Length = 470

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD+LLCDEL+QEIFH++P PSS+AV+LVSK                  L     +I+S S
Sbjct: 1   MDSLLCDELIQEIFHKLPSPSSSAVSLVSKRWLRLYRTSKTA----ISLRLCNLSISSLS 56

Query: 198 AFLTQHPFLSSLFI--XXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           + L+ +PFLSSL I                 ++  I   C NL+ LRF
Sbjct: 57  SLLSHYPFLSSLSILSAAESSASPAATASAQIISEIRRFCTNLKALRF 104


>ref|XP_004141109.1| PREDICTED: F-box/LRR-repeat protein 7-like [Cucumis sativus]
          Length = 470

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD+LLCDEL+QEIFH++P PSS+AV+LVSK                  L     +I+S S
Sbjct: 1   MDSLLCDELIQEIFHKLPSPSSSAVSLVSKRWLRLYRTSKTA----ISLRLCNLSISSLS 56

Query: 198 AFLTQHPFLSSLFI--XXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           + L+ +PFLSSL I                 ++  I   C NL+ LRF
Sbjct: 57  SLLSHYPFLSSLSILSAAESSASPAATASAQIISEIRRFCTNLKALRF 104


>ref|XP_004304643.1| PREDICTED: F-box/LRR-repeat protein 7-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 468

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 40/106 (37%), Positives = 54/106 (50%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD LLCDEL+QE+F R+PP SS++V+LVSK                  L  + + + S S
Sbjct: 1   MDNLLCDELVQEVFLRLPPSSSSSVSLVSKRWLHLHRTSRTSLTLR--LTGDDSTVASLS 58

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           + L+ +PFLS L I             D LLL + + C  L  LRF
Sbjct: 59  SLLSHYPFLSCLSI-LLSDPRSKTTLADQLLLLVCTFCAQLHSLRF 103


>ref|XP_002272892.1| PREDICTED: SCF E3 ubiquitin ligase complex F-box protein grrA
           [Vitis vinifera]
          Length = 470

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/106 (38%), Positives = 52/106 (49%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MDT+LCDELLQEIFHR+P  S  AV+LVS+                 P   +        
Sbjct: 1   MDTILCDELLQEIFHRLPSSSFPAVSLVSRRWLRLYRTSRTSLSLCIPPRNSTVGPPCVL 60

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNLRHLRF 335
           + L+ +PFLSSL I             D LL +++SSC  LR L F
Sbjct: 61  SLLSLYPFLSSLSI---SSTDSTTAFSDYLLRSVSSSCSTLRRLSF 103


>ref|XP_004304644.1| PREDICTED: F-box/LRR-repeat protein 7-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 441

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 38/104 (36%), Positives = 52/104 (50%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MD LLCDEL+QE+F R+PP SS++V+LVSK                  L  + + + S S
Sbjct: 1   MDNLLCDELVQEVFLRLPPSSSSSVSLVSKRWLHLHRTSRTSLTLR--LTGDDSTVASLS 58

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNLRHL 329
           + L+ +PFLS L I             D LLL + + C  L  L
Sbjct: 59  SLLSHYPFLSCLSI-LLSDPRSKTTLADQLLLLVCTFCAQLHSL 101


>ref|XP_006387920.1| hypothetical protein POPTR_0479s00200g [Populus trichocarpa]
           gi|550308859|gb|ERP46834.1| hypothetical protein
           POPTR_0479s00200g [Populus trichocarpa]
          Length = 484

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRV-----PPPSS---AAVTLVSKXXXXXXXXXXXXXXXHFPLPYN 173
           MD +LCDELLQEIF R+     PPPSS   A+V+LVSK                  L  N
Sbjct: 1   MDDMLCDELLQEIFTRIPKSLPPPPSSASAASVSLVSK----RWLHLYRTSKTSLSLRLN 56

Query: 174 P--TAITSFSAFLTQHPFLS--SLFIXXXXXXXXXXXXEDP-----LLLTIASSCPNLRH 326
           P  + I+S ++ L+ +PFLS  SLF+              P     LL  +++ C +L+H
Sbjct: 57  PDDSTISSLTSVLSHYPFLSSLSLFLLSSDPTVPATITSPPAFYDRLLFIVSAFCSSLKH 116

Query: 327 LRF 335
           LRF
Sbjct: 117 LRF 119


>ref|XP_002323795.1| hypothetical protein POPTR_0017s10600g [Populus trichocarpa]
           gi|222866797|gb|EEF03928.1| hypothetical protein
           POPTR_0017s10600g [Populus trichocarpa]
          Length = 484

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRV-----PPPSS---AAVTLVSKXXXXXXXXXXXXXXXHFPLPYN 173
           MD +LCDELLQEIF R+     PPPSS   A+V+LVSK                  L  N
Sbjct: 1   MDDMLCDELLQEIFTRIPKSLPPPPSSASAASVSLVSK----RWLHLYRTSKTSLSLRLN 56

Query: 174 P--TAITSFSAFLTQHPFLS--SLFIXXXXXXXXXXXXEDP-----LLLTIASSCPNLRH 326
           P  + I+S ++ L+ +PFLS  SLF+              P     LL  +++ C +L+H
Sbjct: 57  PDDSTISSLTSVLSHYPFLSSLSLFLLSSDPTVPATITSPPAFYDRLLFIVSAICSSLKH 116

Query: 327 LRF 335
           LRF
Sbjct: 117 LRF 119


>ref|XP_006663383.1| PREDICTED: F-box/LRR-repeat protein 20-like [Oryza brachyantha]
          Length = 488

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           MDT LCD+LLQE+F  +PP ++ AV+LVS+                 P+  + + +   +
Sbjct: 1   MDTALCDDLLQEVFRLLPPAAAPAVSLVSRRWYALLRASITSLTLRLPVSSDASVVAPLA 60

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIAS--SCPNLRHLRF 335
           A L++ PFLS+L +             D +LL +AS  S   L  LRF
Sbjct: 61  ALLSRFPFLSALAV---VSTAATDQVADAILLLVASSPSAARLSGLRF 105


>ref|XP_006470246.1| PREDICTED: F-box/LRR-repeat protein 3-like [Citrus sinensis]
          Length = 483

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRV---PPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAIT 188
           M+ +LCDELLQEIF ++   P  SS +V LVSK                  +P N + + 
Sbjct: 1   MENMLCDELLQEIFTKLPTTPSSSSLSVCLVSKRWLNLYRASKTSLSLRI-IPDN-SMVF 58

Query: 189 SFSAFLTQHPFLSSLFIXXXXXXXXXXXXE-------DPLLLTIASSCPNLRHLRF 335
           S S+ L+ +PF+SSL +                    D LL  ++SSC NL+HLRF
Sbjct: 59  SMSSLLSNYPFVSSLSVALSSSESTAATSSRSNPSFFDRLLFVVSSSCSNLKHLRF 114


>gb|ESW12939.1| hypothetical protein PHAVU_008G154600g [Phaseolus vulgaris]
          Length = 461

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/101 (36%), Positives = 50/101 (49%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRVPPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAITSFS 197
           M+  L DELLQEIF ++PP SS++V LV K                   P++   + S S
Sbjct: 1   MEKSLYDELLQEIFQKLPPSSSSSVALVCKRWLHLYRSSTTSLSLRL-TPHSSLTVASLS 59

Query: 198 AFLTQHPFLSSLFIXXXXXXXXXXXXEDPLLLTIASSCPNL 320
           +FL+ HPFLSSL +               +L  I+SSC NL
Sbjct: 60  SFLSHHPFLSSLSL----FLSPPFSLSPHILSLISSSCSNL 96


>ref|XP_006446584.1| hypothetical protein CICLE_v10015079mg [Citrus clementina]
           gi|557549195|gb|ESR59824.1| hypothetical protein
           CICLE_v10015079mg [Citrus clementina]
          Length = 483

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
 Frame = +3

Query: 18  MDTLLCDELLQEIFHRV---PPPSSAAVTLVSKXXXXXXXXXXXXXXXHFPLPYNPTAIT 188
           M+ +LCDELLQEIF ++   P  SS +V LVSK                  +P N + + 
Sbjct: 1   MENMLCDELLQEIFTKLPTTPSSSSLSVCLVSKRWFNLYRASKTSLSLRI-IPDN-SMVF 58

Query: 189 SFSAFLTQHPFLSSLFIXXXXXXXXXXXXE-------DPLLLTIASSCPNLRHLRF 335
           S S+ L+ +PF+SSL +                    D LL  ++SSC NL+HLRF
Sbjct: 59  SVSSLLSNYPFVSSLSVALSSSESTATTSSRSNPSFFDRLLFVVSSSCSNLKHLRF 114


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