BLASTX nr result

ID: Rehmannia23_contig00016257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00016257
         (1340 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004290281.1| PREDICTED: uncharacterized protein LOC101292...    54   1e-07

>ref|XP_004290281.1| PREDICTED: uncharacterized protein LOC101292173 [Fragaria vesca
            subsp. vesca]
          Length = 391

 Score = 53.5 bits (127), Expect(2) = 1e-07
 Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
 Frame = -2

Query: 1333 PRVLVNALADLSLAQMDAIVDMRFGSLLPLSIVDFPSQLTFWLVENFNPASSKLLVDSFR 1154
            P++  + ++  S+ +  A+ +M FG LL L        L  WL++ F+P+ S + V   +
Sbjct: 41   PKLFKDVVSKFSVEKKVAVEEMGFGLLLKLQCEQLQLGLCGWLIDRFDPSKSSIEVHG-K 99

Query: 1153 RIRIDPVDDERVLGFPN-GQEIVVKKIKSESWDLYNGWPIIFEREDFRVT-TKQVATKIR 980
            R  + P D E ++G  + G ++ ++  K+E  +L N   I F R   R++   ++A K++
Sbjct: 100  RFNLGPTDFENIMGVKDGGHDVEIRGSKAEIQELKN---IHFGRSRHRISGMSKMAEKLK 156

Query: 979  SFVDGGV*FRRLFLILVDCLLIGNLSSGYMNPHLLKSLEDV 857
               +    FR  F++     L+    SG +    L  L D+
Sbjct: 157  EKKNVDDTFRVRFVLFALATLLCPSISGDLTEKYLHPLRDI 197



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -3

Query: 765 NGPLLFLMVFYVDRVVCGRRSIPRMRPNVLAW 670
           +G +LFL +FY D VV GR  + R    ++AW
Sbjct: 229 SGCVLFLKLFYFDLVVHGRTFVNRSLTPIVAW 260


Top