BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00016185
         (1605 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624...   296   e-120
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g...   302   e-118
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz...   300   e-117
emb|CCH50966.1| T4.5 [Malus x robusta]                                293   e-116
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]   286   e-116
gb|AAB82754.1| retrofit [Oryza longistaminata]                        298   e-116
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group...   296   e-116
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  298   e-116
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   298   e-115
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni...   300   e-115
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   302   e-115
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|...   292   e-115
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   280   e-114
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   291   e-113
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...   279   e-113
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   280   e-113
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   293   e-113
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]   297   e-113
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   281   e-112
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   290   e-112

>ref|XP_006465491.1| PREDICTED: uncharacterized protein LOC102624640 [Citrus sinensis]
          Length = 1682

 Score =  296 bits (759), Expect(3) = e-120
 Identities = 154/321 (47%), Positives = 206/321 (64%), Gaps = 2/321 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  T+R++LSLAV   W+++ +D+NNAFL G L E +YM QP G+ D S+P HVCKL K
Sbjct: 409  VKASTVRVILSLAVMNKWELRQVDVNNAFLNGILVEDVYMGQPEGFIDPSRPLHVCKLKK 468

Query: 1231 AIYGLKQAPKSWNDKLKFHLL-SLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDS 1055
            A+YGLKQAP++W ++LK  ++   GFQ S SD  LF++  G              +TG S
Sbjct: 469  ALYGLKQAPRAWFERLKDAMVVKWGFQNSRSDNSLFYKWIGDQVIFVLVYVDDIIITGSS 528

Query: 1054 PSLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNP 878
              +VQQV  N+Q  F+LK           EV  ++ G+ L+Q KYI D+L K N++ C+P
Sbjct: 529  DKMVQQVITNMQNAFALKDLGKLSYFLGIEVTKTASGIYLSQSKYIADILAKHNMADCSP 588

Query: 877  CVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSH 698
              TP      L      +  N++ Y+S VGALQY+TLTR +I++ VNKLSQFL  PT  H
Sbjct: 589  VPTPMATGHYLTKGSGSVISNSSQYKSAVGALQYVTLTRPEIAFSVNKLSQFLASPTAEH 648

Query: 697  WGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIA 518
            W +CKR+LRYLKGT H GL F     + +  FSD+DWA   DD++S +GY V+LG NL++
Sbjct: 649  WESCKRLLRYLKGTIHFGLHFYHYGTMQINCFSDSDWACDKDDRKSVAGYAVYLGSNLVS 708

Query: 517  WSSKKQNVVARSSTETEYSPL 455
            WSSKKQ VV+RSSTE EY  L
Sbjct: 709  WSSKKQAVVSRSSTEAEYRAL 729



 Score =  109 bits (273), Expect(3) = e-120
 Identities = 50/102 (49%), Positives = 75/102 (73%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT ++ WI+SL  EL   L    ++WCDN SAI+LA NPV+HA+TKH+E+D+H+I
Sbjct: 727  RALAQATAEVTWIQSLLKELHIHLVTAPIMWCDNQSAIALAHNPVYHAKTKHVELDIHFI 786

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 159
            R+KV  K++ ++++PSE+Q ADVL K L   +F  L SK ++
Sbjct: 787  RDKVTAKQITVQFIPSEDQNADVLTKALTFNQFHYLRSKLNV 828



 Score = 77.8 bits (190), Expect(3) = e-120
 Identities = 34/64 (53%), Positives = 47/64 (73%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            NHTWDLV  +  +K+V +  +F++KY  +G + R+KA+LVAKGF Q  G+DY +TFSPVV
Sbjct: 350  NHTWDLVLPSEPIKVVGNKWIFKIKYHADGTISRYKARLVAKGFHQTQGVDYTETFSPVV 409

Query: 1424 KPIT 1413
            K  T
Sbjct: 410  KAST 413


>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
            gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
            Japonica Group]
          Length = 821

 Score =  302 bits (774), Expect(3) = e-118
 Identities = 157/322 (48%), Positives = 203/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR+VLSLAV+RGW ++ +D+ NAFL+G L+E +YM QP GYE  S P +VCKL K
Sbjct: 392  VKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDK 451

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGF  S +D  LFF ++G              +    P
Sbjct: 452  ALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVP 511

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +   L K F+LK           EVH    GL+L+Q KY  DLL++  +  C P 
Sbjct: 512  DATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPV 571

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL + +  L    ++T YRS VGALQYLTLTR DIS+ +NK+ QFLH PTT+
Sbjct: 572  STPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTT 631

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRY+K T   GL F  +P L +  FSDADWA + DD+RST G+ VFLGPNL+
Sbjct: 632  HWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLV 691

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSSTE EY  L
Sbjct: 692  SWSARKQATVSRSSTEAEYKAL 713



 Score =  101 bits (251), Expect(3) = e-118
 Identities = 43/103 (41%), Positives = 72/103 (69%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++W+++L  ELG    + + LWCDN+ A  L++NP+FHARTKHIEVD H++
Sbjct: 711  KALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFV 770

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQ 156
            RE+V  K +EI Y+ +++Q+AD   K +P  + +   +  +L+
Sbjct: 771  RERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 813



 Score = 72.4 bits (176), Expect(3) = e-118
 Identities = 35/64 (54%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      ++D   V++VK + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 333  NKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 392

Query: 1424 KPIT 1413
            K  T
Sbjct: 393  KAAT 396


>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
            Group]
          Length = 1399

 Score =  300 bits (768), Expect(3) = e-117
 Identities = 157/322 (48%), Positives = 202/322 (62%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR+VLSLAV+RGW ++ +D+ NAFL+G L+E +YM QP GYE  S P +VCKL K
Sbjct: 970  VKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMKQPPGYEKKSMPNYVCKLDK 1029

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGF  S +D  LFF ++G              V    P
Sbjct: 1030 ALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIVASSVP 1089

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +   L K F+LK           EVH    GL+L+Q KY  DLL++  +  C P 
Sbjct: 1090 DATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPV 1149

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL + +  L    ++T YRS VGALQYLTLTR DIS+ +NK+ QFLH PTT+
Sbjct: 1150 STPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTT 1209

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRY+K T   GL F  +P L +  FSDADWA + DD+RST G+ VFLGPNL+
Sbjct: 1210 HWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLV 1269

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSS E EY  L
Sbjct: 1270 SWSARKQATVSRSSIEAEYKAL 1291



 Score =  101 bits (251), Expect(3) = e-117
 Identities = 43/103 (41%), Positives = 72/103 (69%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++W+++L  ELG    + + LWCDN+ A  L++NP+FHARTKHIEVD H++
Sbjct: 1289 KALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDFHFV 1348

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQ 156
            RE+V  K +EI Y+ +++Q+AD   K +P  + +   +  +L+
Sbjct: 1349 RERVARKLLEIAYISTKDQVADGFTKAIPVRQMEMFKNNLNLE 1391



 Score = 72.4 bits (176), Expect(3) = e-117
 Identities = 35/64 (54%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      ++D   V++VK + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 911  NKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 970

Query: 1424 KPIT 1413
            K  T
Sbjct: 971  KAAT 974


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  293 bits (749), Expect(3) = e-116
 Identities = 160/319 (50%), Positives = 205/319 (64%), Gaps = 1/319 (0%)
 Frame = -3

Query: 1408 KPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVKA 1229
            KP TIR++LS+AV+  W I  +D++NAFL+G LKE +YM QP G+ D SKP HVCKL K+
Sbjct: 1235 KPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSKPHHVCKLRKS 1294

Query: 1228 IYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSPS 1049
            +YGLKQAP++W +     +LSLGF  S SD  LF ++   S            +TG S +
Sbjct: 1295 LYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIKRD-TSITFILVYVDDIIITGSSVT 1353

Query: 1048 LVQQVFANLQKVFSLKH-XXXXXXXXLEVHSSSHGLLLNQHKYILDLLKKTNLSSCNPCV 872
              Q + + LQ +F +K          +EVH S  GLLL+Q KY LDLLKKT++    PC 
Sbjct: 1354 ECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKKTDMLGAKPCA 1413

Query: 871  TPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHWG 692
            TP  +S         L  + T YRSTVGALQYLT TR D+++ VN++ Q++H P T H  
Sbjct: 1414 TP--VSTSKLDHSGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSPQTIHLQ 1471

Query: 691  ACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAWS 512
            A KR+LRYLKGT  LGL F+   +  L ++SDADWA    D+RSTSGYCVFLG NLI+WS
Sbjct: 1472 AVKRILRYLKGTVDLGLWFTKGSQC-LTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWS 1530

Query: 511  SKKQNVVARSSTETEYSPL 455
            +KKQ  VARSSTE EY  L
Sbjct: 1531 AKKQATVARSSTEAEYRSL 1549



 Score =  105 bits (261), Expect(3) = e-116
 Identities = 51/118 (43%), Positives = 77/118 (65%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +SLA    ++ W+  +  ++ F L +  V++CDN S I+LA NPVFHARTKH+E+D HYI
Sbjct: 1547 RSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYI 1606

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPPGLV*GACISVIS 111
            REKV    + ++++ S  Q+AD+  KPL + RF  L SK S+++P   + G   S+IS
Sbjct: 1607 REKVLLGHIGVQHVASLLQIADIFTKPLAADRFAALTSKLSVRSPSFSLRGCVKSIIS 1664



 Score = 72.8 bits (177), Expect(3) = e-116
 Identities = 33/62 (53%), Positives = 45/62 (72%)
 Frame = -2

Query: 1598 TWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVVKP 1419
            TW+LVP      IV    VF+VK++P+G ++R+KA+LVAKGF Q  G+D+ +TFSPV KP
Sbjct: 1177 TWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGLDFSETFSPVAKP 1236

Query: 1418 IT 1413
             T
Sbjct: 1237 TT 1238


>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
          Length = 1074

 Score =  286 bits (733), Expect(3) = e-116
 Identities = 154/324 (47%), Positives = 201/324 (62%), Gaps = 3/324 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VKP TIRLVLS+AV+  W I+ +D++NAFL GDL+E ++M QP G+ED S P HVC+L K
Sbjct: 630  VKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDSSCPTHVCRLQK 689

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQ P++W  KL   LL +GFQ S ++  LF+    +             +TG +P
Sbjct: 690  ALYGLKQGPRAWFHKLSSFLLQIGFQCSRANASLFYFHSASDIIILLIYVDDILITGSNP 749

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
            S V Q+ + L   F+L+           +V   SH L LNQ  YI  LL++ NL      
Sbjct: 750  SRVHQIISQLSSHFALRDLGDISYFLGIKVTRLSHALHLNQQHYIHQLLERANLHEAKSA 809

Query: 874  VTPHCISQKLFLKDSPLFD--NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  + + L   D       +AT YRS VGALQY+TLTR +IS+ VN+  Q++  PTTS
Sbjct: 810  STPGALGKLLSAADGEPLSVLDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTS 869

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            H  A KR+LRYLKGT+  G+    SP L LQ ++D DWAS  DDKRSTSG+C+F   NLI
Sbjct: 870  HLQAAKRILRYLKGTATHGISIHASPSLSLQGYTDVDWASCPDDKRSTSGFCLFFCTNLI 929

Query: 520  AWSSKKQNVVARSSTETEYSPLPL 449
            +WSS KQ VV+RSS E+EY  L L
Sbjct: 930  SWSSTKQRVVSRSSAESEYWALAL 953



 Score =  100 bits (250), Expect(3) = e-116
 Identities = 46/105 (43%), Positives = 71/105 (67%)
 Frame = -2

Query: 461  SLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYIR 282
            +LA    ++ W++ L  EL        ++WCDNISA +LA+N VFHAR+KHIE+D H++R
Sbjct: 950  ALALLVAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEIDFHFVR 1009

Query: 281  EKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 147
            +KV +KE+ I+Y+PS +QLA+V  K +PS +F    ++ S+   P
Sbjct: 1010 DKVLHKELLIQYVPSTDQLANVFTKHVPSCQFSAARTRLSVVPRP 1054



 Score = 82.4 bits (202), Expect(3) = e-116
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP   + KI+    VF++K++PNG +DR+KA+LVA+GF Q  GID+F+TFSPVV
Sbjct: 571  NQTWSLVPPPSNAKIIRCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVV 630

Query: 1424 KPIT 1413
            KP T
Sbjct: 631  KPCT 634


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  298 bits (764), Expect(3) = e-116
 Identities = 158/319 (49%), Positives = 207/319 (64%), Gaps = 3/319 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP G+E  SKP +VCKL K
Sbjct: 1022 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKPDYVCKLDK 1081

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L+ LGF+ S +D  LFF  +G              V   + 
Sbjct: 1082 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDDIIVASSTE 1141

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +  +L K F+LK           EV   S+G++L Q KY  DLLK+ N+S+C P 
Sbjct: 1142 KATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRVNMSNCKPV 1201

Query: 874  VTPHCISQKLFLKD-SPLFDN-ATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  +S+KL L + SPL  N A  YRS VGALQYLTLTR DI+Y VNK+ QFLH PTTS
Sbjct: 1202 STPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTS 1261

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYL   + LGL    S    +  +SDADWA +IDD++ST G+ VFLG NL+
Sbjct: 1262 HWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLV 1321

Query: 520  AWSSKKQNVVARSSTETEY 464
            +WS++KQ  V+RSSTE EY
Sbjct: 1322 SWSARKQPTVSRSSTEAEY 1340



 Score = 98.6 bits (244), Expect(3) = e-116
 Identities = 43/88 (48%), Positives = 64/88 (72%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +++A  T +LIW+++L  ELG    + + +WCDN+ A  L++NPVFHARTKHIEVD H++
Sbjct: 1341 KAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1400

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPL 201
            RE+V  K +EI ++PS +Q+AD   K L
Sbjct: 1401 RERVSQKLLEIDFVPSGDQVADGFTKAL 1428



 Score = 72.4 bits (176), Expect(3) = e-116
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP+     I+    V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 963  NDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1022

Query: 1424 KPIT 1413
            K  T
Sbjct: 1023 KAAT 1026


>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1256

 Score =  296 bits (759), Expect(3) = e-116
 Identities = 157/322 (48%), Positives = 205/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP GYED   P +VCKL K
Sbjct: 833  VKAATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDK 892

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  KL   L  LGFQ S +D  LFF  +G              V     
Sbjct: 893  ALYGLKQAPRAWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQ 952

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
              V  +  +LQK F+LK           EV+ +S G++L Q KY+ DLL++  ++ C P 
Sbjct: 953  DAVPALLKDLQKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPV 1012

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL L +  L   ++A+ YRS VGALQYLTLTR DI + VNK+ QFLH PT  
Sbjct: 1013 STPLSTSEKLTLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQFLHAPTIV 1072

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYLK  + LGL  S S  + +  +SDADWA  IDD+RST G+ VFLG NL+
Sbjct: 1073 HWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGGFAVFLGDNLV 1132

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +W++KKQ  V RSSTE+EY  L
Sbjct: 1133 SWNAKKQATVPRSSTESEYKAL 1154



 Score = 98.6 bits (244), Expect(3) = e-116
 Identities = 43/94 (45%), Positives = 67/94 (71%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++WI++L  EL       + LWCDN+ A  L+SNPVFHARTKHIEVD H++
Sbjct: 1152 KALANATAEIMWIQTLLEELSVPSPPMARLWCDNLGAKYLSSNPVFHARTKHIEVDYHFV 1211

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQ 183
            RE++Q K +E+ ++P+ +Q+AD   K L + + +
Sbjct: 1212 RERMQRKLLEVEFIPTGDQVADGFTKALSARQLE 1245



 Score = 74.3 bits (181), Expect(3) = e-116
 Identities = 35/64 (54%), Positives = 46/64 (71%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      I+D+  V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 774  NKTWHLVPPQKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 833

Query: 1424 KPIT 1413
            K  T
Sbjct: 834  KAAT 837


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  298 bits (764), Expect(3) = e-116
 Identities = 155/319 (48%), Positives = 206/319 (64%), Gaps = 3/319 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP G+E  SKP +VCKL K
Sbjct: 1013 VKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDK 1072

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L+ LGF+ S +D  LFF  +G              +   + 
Sbjct: 1073 ALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTE 1132

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +  +L K F+LK           EV    +G++L Q KY  DLLK+ N+S+C P 
Sbjct: 1133 KATTALLKDLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPV 1192

Query: 874  VTPHCISQKLFLKD-SPLFDN-ATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  +S+KL L + SPL  N AT YRS VGALQYLTLTR DI+Y VNK+ QFLH PTT 
Sbjct: 1193 STPLSVSEKLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTD 1252

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYL   + LGL    S    +  +SDADWA ++DD++ST G+ VFLG NL+
Sbjct: 1253 HWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGGFAVFLGSNLV 1312

Query: 520  AWSSKKQNVVARSSTETEY 464
            +WS++KQ  V+RSSTE EY
Sbjct: 1313 SWSARKQPTVSRSSTEAEY 1331



 Score = 98.6 bits (244), Expect(3) = e-116
 Identities = 43/88 (48%), Positives = 64/88 (72%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +++A  T +LIW+++L  ELG    + + +WCDN+ A  L++NPVFHARTKHIEVD H++
Sbjct: 1332 KAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1391

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPL 201
            RE+V  K +EI ++PS +Q+AD   K L
Sbjct: 1392 RERVSQKLLEIDFVPSGDQVADGFTKAL 1419



 Score = 72.0 bits (175), Expect(3) = e-116
 Identities = 33/64 (51%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP+     ++    V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 954  NDTWHLVPYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1013

Query: 1424 KPIT 1413
            K  T
Sbjct: 1014 KAAT 1017


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  298 bits (764), Expect(3) = e-115
 Identities = 157/322 (48%), Positives = 211/322 (65%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV+RGW +  +D+ NAFL+G L+E +YM QP GYED +K  +VCKL K
Sbjct: 890  VKHATIRIILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDK 949

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   LLSLGFQ S +D  LFF  +G+             V   + 
Sbjct: 950  ALYGLKQAPRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTH 1009

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
               + + ++L K F+LK           EV+    G++L Q KY  DLLKK  +S C P 
Sbjct: 1010 KATEALLSDLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPI 1069

Query: 874  VTPHCISQKLFLKD-SPLFD-NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL + + SPL + + T YRS VGALQYLTLTR DI++ VNK+ QFLH PTT 
Sbjct: 1070 STPLSTSEKLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTL 1129

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRY+K  ++LGL    S    + +FSDADWA ++DD++ST G+ VFLG NL+
Sbjct: 1130 HWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLV 1189

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSSTE+EY  L
Sbjct: 1190 SWSARKQPTVSRSSTESEYKAL 1211



 Score =  101 bits (251), Expect(3) = e-115
 Identities = 43/88 (48%), Positives = 65/88 (73%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +LIW++ L TE+     + + LWCDN+ A  L++NP+FHARTKHIEVD H++
Sbjct: 1209 KALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPIFHARTKHIEVDYHFV 1268

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPL 201
            R++V  K ++I Y+P+ +Q+AD   KPL
Sbjct: 1269 RDRVAKKLLDIEYVPTGDQVADGFTKPL 1296



 Score = 67.8 bits (164), Expect(3) = e-115
 Identities = 32/64 (50%), Positives = 44/64 (68%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      ++    V+++K + +G +DR+KA+LVAKG++Q  GIDY DTFSPVV
Sbjct: 831  NKTWHLVPPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVV 890

Query: 1424 KPIT 1413
            K  T
Sbjct: 891  KHAT 894


>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108706314|gb|ABF94109.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1247

 Score =  300 bits (767), Expect(3) = e-115
 Identities = 159/322 (49%), Positives = 210/322 (65%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV++GW ++ +D+ NAFL+G L+E +YM QP GYED S P +VCKL K
Sbjct: 824  VKAATIRIILSIAVSKGWCMRQLDVQNAFLHGVLEEEVYMKQPPGYEDSSLPGYVCKLDK 883

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  +GFQ S +D  LFF  +G              VT    
Sbjct: 884  ALYGLKQAPRAWYSRLSKKLYDMGFQGSKADTSLFFYNKGDLIIFVLIYVDDIIVTSSRQ 943

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
              V  +  +LQK F+LK           EV   S G++L Q KY+ DLL++ N+  C P 
Sbjct: 944  EAVPALLRDLQKEFALKDLGDLHYFLGIEVTKVSGGIVLTQDKYVNDLLRRVNMFDCKPV 1003

Query: 874  VTPHCISQKLFLKDS-PLFDN-ATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL + +  PL  N AT YRS VGALQYLTLTR DI++ VNK+ QFLH PTT 
Sbjct: 1004 STPLSTSEKLSINEGDPLGPNDATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTH 1063

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYLK  + LGL  S S  + + ++SDADWA ++DD+RST G+ VFLG NL+
Sbjct: 1064 HWAAVKRILRYLKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLV 1123

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSSTE+EY  L
Sbjct: 1124 SWSARKQATVSRSSTESEYKAL 1145



 Score = 95.9 bits (237), Expect(3) = e-115
 Identities = 42/88 (47%), Positives = 63/88 (71%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++W+++L  EL       + LWCDN+ A  L++NPVFHARTKHIEVD H++
Sbjct: 1143 KALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1202

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPL 201
            RE+V  K +EI ++P+ +Q+AD   K L
Sbjct: 1203 RERVSRKLLEIDFVPTGDQVADGFTKAL 1230



 Score = 72.0 bits (175), Expect(3) = e-115
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      ++D   V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 765  NKTWHLVPPQKGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 824

Query: 1424 KPIT 1413
            K  T
Sbjct: 825  KAAT 828


>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 932

 Score =  302 bits (773), Expect(3) = e-115
 Identities = 155/322 (48%), Positives = 209/322 (64%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIRL+LS+AV++GW ++ +D+ NAFL+G L+E +YM QP G+E+  +P ++CKL K
Sbjct: 511  VKAATIRLILSIAVSKGWSLRQLDVQNAFLHGYLEEEVYMRQPPGFENKGQPNYLCKLDK 570

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGF  S +D  LFF  +G              V   S 
Sbjct: 571  ALYGLKQAPRAWYSRLSTKLQELGFISSKADTSLFFYNKGGCTIFILVYVDDIIVASSSA 630

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
             +V  +  +L+K F+LK           EV   S GL+L+Q  Y  D+LK+  +S C P 
Sbjct: 631  EVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQGLVLSQAWYASDILKRAGMSICKPA 690

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   ++KL ++D      ++A+ YRS VGALQYLTLTRSD+S++VNK+ QFLH PTT 
Sbjct: 691  STPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTV 750

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRY+KGT   GL F  S  + + +FSDADWA   DD+RST G+ VFLGPNLI
Sbjct: 751  HWSAVKRILRYIKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLI 810

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSSTE EY  L
Sbjct: 811  SWSARKQATVSRSSTEAEYKAL 832



 Score = 97.1 bits (240), Expect(3) = e-115
 Identities = 41/90 (45%), Positives = 65/90 (72%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA ATT++ W++ +  EL  +    + LWCDN+ A  L++NPVFHARTKHIE+D H++
Sbjct: 830  KALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPVFHARTKHIEIDYHFV 889

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPS 195
            RE+V  K ++I+++ + +QLAD   K LP+
Sbjct: 890  REQVAKKLLDIQFISTTDQLADGFTKSLPA 919



 Score = 68.6 bits (166), Expect(3) = e-115
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      I+D   ++++K + +G +DR+KA+LVAKGF+Q  GIDY DTFS VV
Sbjct: 452  NKTWHLVPPTQGKNIIDCKWMYKIKRKADGSIDRYKARLVAKGFKQRYGIDYEDTFSLVV 511

Query: 1424 KPIT 1413
            K  T
Sbjct: 512  KAAT 515


>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
            gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1447

 Score =  292 bits (747), Expect(3) = e-115
 Identities = 155/322 (48%), Positives = 204/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR+VLS+AV+RGW ++ +D+ NAFL+G L+E +YM QP GYED S P +VCKL K
Sbjct: 1024 VKAATIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVCKLDK 1083

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGFQ S  D  LFF  +G              VT    
Sbjct: 1084 ALYGLKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQ 1143

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
              V  +  +L+K F+LK           EV+  +  ++L Q KY  DLL++ N+  C P 
Sbjct: 1144 EAVSALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACDLLRRVNMFDCKPV 1203

Query: 874  VTPHCISQKLFLKDSPLFD--NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL   +  L    +AT YRS VGALQYLTLTR DI++ VNK+ QFLH PTT 
Sbjct: 1204 STPLSTSEKLSAHEGDLLGPLDATNYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTV 1263

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYLK  + LGL    S  + + ++SDADWA ++DD+RST G+ VFLG NL+
Sbjct: 1264 HWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLV 1323

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +W ++KQ  V+RSSTE+EY  L
Sbjct: 1324 SWCARKQATVSRSSTESEYKAL 1345



 Score =  101 bits (251), Expect(3) = e-115
 Identities = 45/89 (50%), Positives = 65/89 (73%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++W+++L TEL       + LWCDN+ A  L+SNPVFHARTKHIEVD H++
Sbjct: 1343 KALANATAEIMWVQTLLTELQVQSPPMAKLWCDNLGAKYLSSNPVFHARTKHIEVDYHFV 1402

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLP 198
            RE+V  K +EI ++P+ +Q+AD   K LP
Sbjct: 1403 RERVSQKLLEIDFVPTGDQVADGFTKALP 1431



 Score = 72.0 bits (175), Expect(3) = e-115
 Identities = 34/64 (53%), Positives = 45/64 (70%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      ++D   V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 965  NKTWHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1024

Query: 1424 KPIT 1413
            K  T
Sbjct: 1025 KAAT 1028


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  280 bits (717), Expect(3) = e-114
 Identities = 145/320 (45%), Positives = 203/320 (63%), Gaps = 1/320 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++L++A++  W+I+ +D++NAFL G+L+E +YM+QP GY D   P  VC+L K
Sbjct: 973  VKAATIRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDPQFPNRVCRLKK 1032

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   LL  GF +S +D  +F     A+            VTG S 
Sbjct: 1033 ALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSSMFLHFGKATTLIVLVYVDDILVTGSSS 1092

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
            + +  + A L  VF+L+           EV  +   + L+Q KYI DLL +T L    P 
Sbjct: 1093 TQISSLIAKLDSVFALRDLGQLSFFLGIEVSYNEGSMTLSQTKYISDLLHRTELFDTKPA 1152

Query: 874  VTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHW 695
             TP  + + L   D     + T YRS VGALQY+TLTR DI++ VNK  QF+ +PTT+HW
Sbjct: 1153 NTPGAVGKNLSKFDGDPMTDVTHYRSVVGALQYVTLTRPDIAFAVNKACQFMQQPTTAHW 1212

Query: 694  GACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAW 515
             + KR+LRYL+GT   GL+FSPS  L ++ F+DADW + +DD+RS+SGY V+LG NL++W
Sbjct: 1213 LSVKRILRYLRGTMQDGLLFSPSSNLTIEGFTDADWGAHLDDRRSSSGYLVYLGGNLVSW 1272

Query: 514  SSKKQNVVARSSTETEYSPL 455
            SS KQ VV+RSS E+EY  L
Sbjct: 1273 SSTKQKVVSRSSAESEYRGL 1292



 Score =  101 bits (251), Expect(3) = e-114
 Identities = 46/106 (43%), Positives = 73/106 (68%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            + L  AT +++W+++L  EL   +    +LW DNISA  +A NPVFHARTKHIE+D+H+I
Sbjct: 1290 RGLVFATAEIVWMQALLQELCVPIPAIPLLWYDNISAYHMAKNPVFHARTKHIEIDLHFI 1349

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 147
            R++V   +++++++P+EEQ  D+L K L S RF +L S+  +   P
Sbjct: 1350 RDQVMRGKIQLQFVPTEEQPVDLLTKHLTSSRFLSLKSQLCIAPRP 1395



 Score = 80.9 bits (198), Expect(3) = e-114
 Identities = 33/64 (51%), Positives = 50/64 (78%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            NHTWDLV   P++ ++    V+++K++P+G ++R+KA+LVAKG+ Q  G+DYF+TFSPVV
Sbjct: 914  NHTWDLVEQPPNVNVIGCKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFSPVV 973

Query: 1424 KPIT 1413
            K  T
Sbjct: 974  KAAT 977


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  291 bits (744), Expect(3) = e-113
 Identities = 152/322 (47%), Positives = 203/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LS+AV+RGW ++ +D+ NAFL+G L+E +YM QP GYE+ S P +VCKL K
Sbjct: 1008 VKAATIRIILSIAVSRGWCLRQLDVQNAFLHGVLEEEVYMKQPPGYENPSTPDYVCKLDK 1067

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGF+ S +D  LFF  +G+             V     
Sbjct: 1068 ALYGLKQAPRAWYSRLSGKLHDLGFKGSKADTSLFFYNKGSLTIFLLIYVDDIIVVSSRK 1127

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
              V  +  +LQK F+LK           EV     G+L++Q KY  DLLK+ N+S C   
Sbjct: 1128 EAVSALLQDLQKEFALKDLGDLHYFLGIEVTKIPGGILMSQEKYASDLLKRVNMSDCKSV 1187

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S+KL      +   ++AT YRS VGALQYLTLTR DI++ VNK+ QFLH PTT 
Sbjct: 1188 ATPLSASEKLIAGKGTILGPNDATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTE 1247

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRY+K  + LGL    S  + +  +SDADWA  +DD+RST G+ V+LG NL+
Sbjct: 1248 HWAAVKRILRYIKQCTGLGLRICKSSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLV 1307

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +W++KKQ  V+RSSTE EY  L
Sbjct: 1308 SWNAKKQATVSRSSTEAEYKAL 1329



 Score = 96.7 bits (239), Expect(3) = e-113
 Identities = 45/113 (39%), Positives = 72/113 (63%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA AT +++W+++L  EL       + LWCDN+ A  L+ NPVFHARTKHIEVD H++
Sbjct: 1327 KALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPVFHARTKHIEVDYHFV 1386

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPPGLV*GAC 126
            RE+V  K +++ Y+ + +Q+AD   K LP  + +    K++L     ++ G C
Sbjct: 1387 RERVARKLLQVDYVSTNDQVADGFTKALPVKQLENF--KYNLNLGKVVIEGGC 1437



 Score = 72.8 bits (177), Expect(3) = e-113
 Identities = 34/64 (53%), Positives = 46/64 (71%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N+TW LVP      ++D   V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 949  NNTWHLVPPQQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1008

Query: 1424 KPIT 1413
            K  T
Sbjct: 1009 KAAT 1012


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score =  279 bits (714), Expect(3) = e-113
 Identities = 150/322 (46%), Positives = 196/322 (60%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VKP+T+RLVLSLA +RGW ++ +D++N+FL+G L E +YM QP G+ED   PQHVCKL +
Sbjct: 563  VKPVTVRLVLSLAASRGWCLRQVDVSNSFLHGFLTEEVYMQQPPGFEDPRCPQHVCKLQR 622

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQ+P++W   L   L  LGF  S +D  LF                   + G S 
Sbjct: 623  ALYGLKQSPRAWYACLSDKLHQLGFVASKADTSLFIFDHQGVMVYMLVYVDDIVLAGSSL 682

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
            S V Q+ A L   F +K           E   S  G++L QHKY LDLL + N+  C P 
Sbjct: 683  SAVDQLVATLSGSFPIKDLGRLEYFLGIEAAYSFEGMVLMQHKYALDLLHRANMEQCRPV 742

Query: 874  VTPHCISQKLFLK-DSPL-FDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP   S KL      PL  +++  YRS +G LQYLTLTR D+S+ VNK+ Q+L +PTT+
Sbjct: 743  TTPMSTSDKLTRDLGEPLGLEDSFKYRSLIGGLQYLTLTRPDLSFAVNKVCQYLSQPTTA 802

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            H+   KR+LR++KG    GL F  S    L  F+DADWA   DD+RST G+ VFLGPNL+
Sbjct: 803  HYEVVKRILRFVKGIVSTGLRFQRSSSTRLGIFTDADWAGCSDDRRSTGGFAVFLGPNLV 862

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WSS+KQ  V+RSSTE EY  L
Sbjct: 863  SWSSRKQPTVSRSSTEAEYKVL 884



 Score =  100 bits (250), Expect(3) = e-113
 Identities = 47/100 (47%), Positives = 64/100 (64%)
 Frame = -2

Query: 458  LATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYIRE 279
            LA  T + IWI+S+  ELG    +  VLWCDNI A  L++NPVFHARTKHIE+D H++RE
Sbjct: 884  LANGTAEAIWIQSVLKELGVYQSRPPVLWCDNIGATYLSANPVFHARTKHIEIDFHFVRE 943

Query: 278  KVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 159
            KV    +++R + + +QLADV  KP   L      +  +L
Sbjct: 944  KVALGALDVRSISTADQLADVFTKPATQLTLHRFSTNLNL 983



 Score = 80.1 bits (196), Expect(3) = e-113
 Identities = 37/64 (57%), Positives = 46/64 (71%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP  P   IV    +F+ K+ P+G VD++KA+LVA+GF Q  GIDY DTFSPVV
Sbjct: 504  NQTWTLVPRPPGTNIVGSRWIFKTKFCPDGLVDKYKARLVARGFTQQYGIDYHDTFSPVV 563

Query: 1424 KPIT 1413
            KP+T
Sbjct: 564  KPVT 567


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  280 bits (716), Expect(3) = e-113
 Identities = 150/323 (46%), Positives = 203/323 (62%), Gaps = 4/323 (1%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQH--VCKL 1238
            VKP TIR+VL++AV++ W I+ +D+NNAFL G+L+E +YM QP G++  +  +   VCKL
Sbjct: 832  VKPTTIRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKL 891

Query: 1237 VKAIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGD 1058
             KA+YGLKQAP++W DKLK  L   GF  + SD  LF +    S            VTG 
Sbjct: 892  HKALYGLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGS 951

Query: 1057 SPSLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHG-LLLNQHKYILDLLKKTNLSSC 884
            S   + ++ + L+ +FSLK           EV  ++ G L L+Q KYI DLLKKT +   
Sbjct: 952  SSQEIHELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGA 1011

Query: 883  NPCVTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTT 704
                TP     KL        DN   YRS VGALQY+T+TR +I++ VNK+ QF+ +P  
Sbjct: 1012 KSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQFMQKPLD 1071

Query: 703  SHWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNL 524
            +HW A KR+LRYL GT+ LG++  PS  ++L  F DADW S +DD+RSTSG+CVFLG +L
Sbjct: 1072 THWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLGKSL 1131

Query: 523  IAWSSKKQNVVARSSTETEYSPL 455
            ++WSSKKQ+  +RSSTE EY  L
Sbjct: 1132 VSWSSKKQHTTSRSSTEAEYRSL 1154



 Score =  105 bits (263), Expect(3) = e-113
 Identities = 44/102 (43%), Positives = 76/102 (74%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +SLA+ T++++W++SL +EL   +    V+WCDNIS +SL++NPV H+RTKH+E+D++++
Sbjct: 1152 RSLASLTSEMLWLQSLLSELQTKMTMVPVIWCDNISTVSLSANPVLHSRTKHMELDLYFV 1211

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 159
            REKV  +++ + ++P+E+Q+ADV  KPL    F  L  K ++
Sbjct: 1212 REKVMERKLVVNHVPTEDQVADVFTKPLSFRFFDKLREKLTV 1253



 Score = 73.2 bits (178), Expect(3) = e-113
 Identities = 33/64 (51%), Positives = 44/64 (68%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LV    +   V    VF++K  P+G V R+KA+LVAKG+ Q+PG D+++TFSPVV
Sbjct: 773  NKTWSLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVV 832

Query: 1424 KPIT 1413
            KP T
Sbjct: 833  KPTT 836


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  293 bits (751), Expect(3) = e-113
 Identities = 153/322 (47%), Positives = 205/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR++LSLAV++GW ++ +D+ NAFL+G L+E +YM QP G+ED +KP HVCKL K
Sbjct: 1030 VKAATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDPTKPHHVCKLDK 1089

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L+ LGF+ S  D  LFF  +G              V   S 
Sbjct: 1090 ALYGLKQAPRAWFSRLSKKLMDLGFKGSKPDTSLFFLNKGDITMFVLVYVDDIIVASSSE 1149

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +  +L+  F+LK           EV    +G++LNQ KY  DLLKK  +  C P 
Sbjct: 1150 KATAALLQDLKGEFALKDLGELHYFLGIEVSKVQNGIVLNQDKYANDLLKKVGMIDCKPA 1209

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  +S+KL L +  L   ++A+ YRS VGALQYLTLTR DI++ VNK+ QFLH PTT 
Sbjct: 1210 NTPLSVSEKLSLHEGSLLGPEDASHYRSVVGALQYLTLTRPDIAFSVNKVCQFLHAPTTV 1269

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYLK  + LGL    S    +  FSDADWA  +DD+RST G+ +FLG NL+
Sbjct: 1270 HWIAVKRILRYLKQCTRLGLEIHKSGSTLVSGFSDADWAGCLDDRRSTGGFAIFLGSNLV 1329

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +W+++KQ  V+RSSTE+EY  +
Sbjct: 1330 SWNARKQATVSRSSTESEYKAI 1351



 Score = 95.9 bits (237), Expect(3) = e-113
 Identities = 42/102 (41%), Positives = 68/102 (66%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +++A AT +++W+++L  EL     + + +WCDN+ A  L++NPVFHARTKHIEVD H++
Sbjct: 1349 KAIANATAEIMWVQTLLAELEIKSPKAAKIWCDNLGAKYLSANPVFHARTKHIEVDYHFV 1408

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSL 159
            RE+V  K +EI ++ + +Q+AD   KPL     +   S  +L
Sbjct: 1409 RERVSQKLLEIDFVSTNDQVADGFTKPLSVRLLENFKSNLNL 1450



 Score = 68.9 bits (167), Expect(3) = e-113
 Identities = 34/64 (53%), Positives = 44/64 (68%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      I+    V+++K + +G +DR+KA+LVAKGF+Q  GIDY DTFSPVV
Sbjct: 971  NKTWHLVPPQRGRNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVV 1030

Query: 1424 KPIT 1413
            K  T
Sbjct: 1031 KAAT 1034


>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
          Length = 1312

 Score =  297 bits (761), Expect(3) = e-113
 Identities = 158/324 (48%), Positives = 205/324 (63%), Gaps = 3/324 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VKP TIRLVLS+AV+  W I+ +D++NAFL GDL+E ++M QP G+ED S P HVC+L K
Sbjct: 884  VKPCTIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFEDNSCPTHVCRLQK 943

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  KL   LL +GFQ S +D  LF+    +             +TG +P
Sbjct: 944  ALYGLKQAPRAWFHKLSSFLLQIGFQCSRADASLFYFHSASDIIILLIYVDDILITGSNP 1003

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
            S V Q+ + L   F+L+           EV   SH L LNQ +YI  LL++ NL      
Sbjct: 1004 SRVHQIISQLSSHFALRDLGDISYFLGIEVTRRSHALHLNQQRYIHQLLERANLHEAKSA 1063

Query: 874  VTPHCISQKLFLKDSPLFD--NATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  + + L   D       +AT YRS VGALQY+TLTR +IS+ VN+  Q++  PTTS
Sbjct: 1064 STPGALGKLLSAADGEPLSALDATHYRSLVGALQYITLTRPEISFAVNRACQYMARPTTS 1123

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            H  A KR+LRYLKGT+  G+    SP L LQ ++DADWAS  DD+RSTSG+C+F G NLI
Sbjct: 1124 HLQAAKRILRYLKGTATHGISIHASPSLSLQGYTDADWASCPDDRRSTSGFCLFFGTNLI 1183

Query: 520  AWSSKKQNVVARSSTETEYSPLPL 449
            +WSS KQ VV+RSS E+EY  L L
Sbjct: 1184 SWSSTKQRVVSRSSAESEYRALAL 1207



 Score = 82.8 bits (203), Expect(3) = e-113
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP   + KI+    VF++K++PNG +DR+KA+LVA+GF Q  GID+F+TFSPVV
Sbjct: 825  NQTWSLVPPPSNAKIIGCKWVFKLKHKPNGSIDRYKARLVAQGFHQTYGIDFFETFSPVV 884

Query: 1424 KPIT 1413
            KP T
Sbjct: 885  KPCT 888



 Score = 77.8 bits (190), Expect(3) = e-113
 Identities = 39/106 (36%), Positives = 60/106 (56%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA    ++ W++ L  EL        ++WCDNISA +LA+N VFHAR+KHIE+D+H++
Sbjct: 1203 RALALLAAEVSWVQFLLKELCIPQQDTPLIWCDNISATALAANSVFHARSKHIEIDLHFV 1262

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRFQTLCSKFSLQTPP 147
            R+K                LADV  K +PS +F    ++ S+   P
Sbjct: 1263 RDK----------------LADVFTKHVPSCQFSAARTRLSVVPRP 1292


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  281 bits (720), Expect(3) = e-112
 Identities = 150/320 (46%), Positives = 199/320 (62%), Gaps = 1/320 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VKP T+R+V ++A++R W I+ +D+NNAFL GDL+E ++M QP G+ D   P  VC+L K
Sbjct: 1022 VKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNLVCRLHK 1081

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W +KL   LLS GF  + SD  LF +                 V G   
Sbjct: 1082 ALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDILVIGSDT 1141

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
            + +  + A L   FSLK           +V  +++GL L+Q KYI DLL+KT +  C P 
Sbjct: 1142 AAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKMVHCKPA 1201

Query: 874  VTPHCISQKLFLKDSPLFDNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTSHW 695
             TP     KL + D    ++   YRSTVGALQY+T+TR ++S+ VNK+ QF+  PT  HW
Sbjct: 1202 RTPLPTGLKLRVGDGDPVEDLHGYRSTVGALQYVTITRPELSFSVNKVCQFMQNPTEEHW 1261

Query: 694  GACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLIAW 515
               KR+LRYL+GT   GL    S  L L  F DADWAS +DD+RSTSG+CVFLGPNLI+W
Sbjct: 1262 KVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSGHCVFLGPNLISW 1321

Query: 514  SSKKQNVVARSSTETEYSPL 455
             SKKQ++V+RSS E EY  L
Sbjct: 1322 QSKKQHIVSRSSIEIEYRSL 1341



 Score =  107 bits (266), Expect(3) = e-112
 Identities = 47/93 (50%), Positives = 71/93 (76%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            +SLA    ++ W++SL +EL   L +  ++WCDN+S + L++NPV HARTKHIE+D++++
Sbjct: 1339 RSLAGLVAEITWLRSLLSELQLPLAKPPLVWCDNLSTVLLSANPVLHARTKHIELDLYFV 1398

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPLPSLRF 186
            REKV  KEVE+R++PS +QLADVL K + S +F
Sbjct: 1399 REKVIRKEVEVRHVPSADQLADVLTKTVSSTQF 1431



 Score = 68.6 bits (166), Expect(3) = e-112
 Identities = 31/64 (48%), Positives = 42/64 (65%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N+TW LVP     + +    V++ K  P+G V ++KA+LVAKGF Q  G D+ +TFSPVV
Sbjct: 963  NNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFTETFSPVV 1022

Query: 1424 KPIT 1413
            KP T
Sbjct: 1023 KPST 1026


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  290 bits (741), Expect(3) = e-112
 Identities = 153/322 (47%), Positives = 204/322 (63%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1411 VKPITIRLVLSLAVTRGWKIQHIDINNAFLYGDLKEVIYMTQPTGYEDISKPQHVCKLVK 1232
            VK  TIR +LS+A++RGW ++ +D+ NAFL+G L+E ++M QP GYE   K  +VCKL K
Sbjct: 1009 VKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQ--KDGYVCKLDK 1066

Query: 1231 AIYGLKQAPKSWNDKLKFHLLSLGFQVSVSDGCLFFQQQGASXXXXXXXXXXXXVTGDSP 1052
            A+YGLKQAP++W  +L   L  LGF+ S SD  LFF  +G              V   S 
Sbjct: 1067 ALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAMFMLVYVDDIIVASSSI 1126

Query: 1051 SLVQQVFANLQKVFSLKHXXXXXXXXL-EVHSSSHGLLLNQHKYILDLLKKTNLSSCNPC 875
                 +  NL + F+LK           EV   ++G++L Q KY +D+LK+ N+S C   
Sbjct: 1127 DATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLKRVNMSDCKAV 1186

Query: 874  VTPHCISQKLFLKDSPLF--DNATLYRSTVGALQYLTLTRSDISYIVNKLSQFLHEPTTS 701
             TP  IS+KL   +   F  +++T YRS VGALQYLTLTR D+S+ VNK+ Q+LH PTT 
Sbjct: 1187 NTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTK 1246

Query: 700  HWGACKRVLRYLKGTSHLGLMFSPSPRLHLQSFSDADWASAIDDKRSTSGYCVFLGPNLI 521
            HW A KR+LRYLK T  LGL  S S  L + +FSDADWA  +DD+ ST G+ VF+GPNL+
Sbjct: 1247 HWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLV 1306

Query: 520  AWSSKKQNVVARSSTETEYSPL 455
            +WS++KQ  V+RSSTE EY  L
Sbjct: 1307 SWSARKQATVSRSSTEAEYKAL 1328



 Score = 94.4 bits (233), Expect(3) = e-112
 Identities = 40/88 (45%), Positives = 63/88 (71%)
 Frame = -2

Query: 464  QSLATATTDLIWIKSLFTELGFSLDQQSVLWCDNISAISLASNPVFHARTKHIEVDVHYI 285
            ++LA  T +++WI++L  ELG    + + +WCDNI A  + +NPVFHARTKHIEVD H++
Sbjct: 1326 KALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPVFHARTKHIEVDYHFV 1385

Query: 284  REKVQNKEVEIRYLPSEEQLADVLIKPL 201
            RE+V  K +++ Y+ +++Q+AD   K L
Sbjct: 1386 RERVARKFLQVEYISTKDQVADGFTKTL 1413



 Score = 73.2 bits (178), Expect(3) = e-112
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -2

Query: 1604 NHTWDLVPFAPDMKIVDHMLVFRVKYQPNGEVDRFKAKLVAKGFQQLPGIDYFDTFSPVV 1425
            N TW LVP      I+D   V++VK + +G +DR+KA++VAKGF+Q  GIDY DTF+PVV
Sbjct: 950  NKTWHLVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARVVAKGFKQRYGIDYEDTFNPVV 1009

Query: 1424 KPITCET 1404
            K  T  T
Sbjct: 1010 KAATIRT 1016