BLASTX nr result
ID: Rehmannia23_contig00016048
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00016048
(320 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 72 8e-11
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 72 8e-11
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 72 1e-10
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 71 1e-10
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 71 1e-10
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 71 1e-10
emb|CAA20201.1| putative transposable element [Arabidopsis thali... 71 1e-10
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 71 2e-10
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 70 2e-10
ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatul... 70 3e-10
ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Popu... 69 6e-10
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 69 8e-10
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 68 1e-09
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa] 68 1e-09
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 68 1e-09
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 67 2e-09
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 67 2e-09
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ... 67 2e-09
emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis] 67 2e-09
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 67 2e-09
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
NP FH RTKHIDVR+H+IR+ ++ G + LEKI NPADM TK LPV+KF L ++
Sbjct: 710 NPXFHXRTKHIDVRYHFIRETISSGAMKLEKISXVDNPADMATKVLPVTKFKYSLDLV 767
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
N V H+RTKHIDV+FH+IR+++A G V + KI +E NPAD+ TK LPV+KF T L L
Sbjct: 1301 NNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFL 1358
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/58 (58%), Positives = 45/58 (77%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
N V+H+RTKHIDV++H+IRD+V G V + KI +E NPAD+ TK LPVSKF L++L
Sbjct: 1075 NAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKVLPVSKFQDALELL 1132
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
N V+H+RTKHIDVRF+YIRDVV G V + KI + NP D TKC+PV+KF + L +L
Sbjct: 1293 NSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVL 1350
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILNF 180
N +FH+RTKH+DVR+H+IR+ V+ G + LEKI + NPA+M TK LP+ K+ CL ++
Sbjct: 741 NLMFHERTKHVDVRYHFIRETVSSGAMKLEKISTTDNPANMATKVLPIRKYRYCLDLVQV 800
Query: 181 D 183
+
Sbjct: 801 E 801
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 71.2 bits (173), Expect = 1e-10
Identities = 30/59 (50%), Positives = 45/59 (76%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILN 177
N FH+R+KHIDVR H++RD++A G + + K+P++ NP+DM TK L V+KF CL ++N
Sbjct: 673 NQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDNPSDMLTKSLNVTKFKHCLNLIN 731
>emb|CAA20201.1| putative transposable element [Arabidopsis thaliana]
gi|7268932|emb|CAB79135.1| putative transposable element
[Arabidopsis thaliana]
Length = 1308
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/58 (53%), Positives = 42/58 (72%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
N FHDRTKH++V+F++IRD++ G V + KI + NPADM TKC+PV KF L +L
Sbjct: 1247 NNAFHDRTKHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTKCIPVKKFEEALDVL 1304
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/58 (51%), Positives = 43/58 (74%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
NP+FH+R+KHIDV+ H+IR+ ++ G V +KI +E NP D TK LPV+KF CL ++
Sbjct: 554 NPMFHERSKHIDVKLHFIREXISSGAVKFDKIATEENPTDALTKSLPVAKFELCLNLI 611
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILN 177
N FH+RTKHIDVRFH+IRD+ +G+V + KI ++ NPADM TK + KF CL ++N
Sbjct: 877 NQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTKPISKVKFKQCLNLIN 935
>ref|XP_003606104.1| Aspartyl-tRNA synthetase [Medicago truncatula]
gi|355507159|gb|AES88301.1| Aspartyl-tRNA synthetase
[Medicago truncatula]
Length = 803
Score = 70.1 bits (170), Expect = 3e-10
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +1
Query: 7 VFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILNF 180
V+H+RTKHID+R H++RD++ + +EK+ SE NPAD+ TK LP S+F CL ++ F
Sbjct: 99 VYHERTKHIDIRLHFVRDMIESKEIVVEKVASEENPADVFTKSLPRSRFKHCLDLIKF 156
>ref|XP_002320045.2| hypothetical protein POPTR_0014s01150g [Populus trichocarpa]
gi|550323083|gb|EEE98360.2| hypothetical protein
POPTR_0014s01150g [Populus trichocarpa]
Length = 905
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILNF 180
N V H RTKHIDVRFH++R++V +G + L+KI + NPADM TKC+ KF CL +
Sbjct: 42 NQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDLREE 101
Query: 181 DT 186
D+
Sbjct: 102 DS 103
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/56 (53%), Positives = 44/56 (78%)
Frame = +1
Query: 7 VFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
+FH+RTKHID+++HY+RDVVA+G + + KI + NPADM TK +PV+KF C ++
Sbjct: 234 MFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMTKPVPVAKFELCSSLV 289
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 68.2 bits (165), Expect = 1e-09
Identities = 29/59 (49%), Positives = 44/59 (74%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILN 177
N FH+R+KHIDVR H++RD++A G + + K+ ++ NP+DM TK L V+KF CL ++N
Sbjct: 1146 NQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKSLNVTKFKHCLNLIN 1204
>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
Length = 353
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/57 (54%), Positives = 41/57 (71%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKI 171
N V H RTKHIDVRFH++R++V +G + L+KI + NPADM TKC+ KF CL +
Sbjct: 42 NQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLTKCVSGIKFQHCLDL 98
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKF 153
N VFH+RTKH+DVR+H+IR++V+ G V LEKI + N ADM TK L VSKF
Sbjct: 369 NLVFHERTKHVDVRYHFIREIVSLGAVKLEKISTTDNSADMATKVLLVSKF 419
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
N V H+RTKHIDVR+H+IR+ +A G + + KI + +NPAD+ TK +PVSK LK+L
Sbjct: 1280 NSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLL 1337
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 7 VFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
+FH+RTKHID+++HY+RD+VA+G + + KI NPADM TK +PV+KF C ++
Sbjct: 1263 MFHERTKHIDIKYHYVRDIVAQGKLKVCKISIHDNPADMMTKPIPVAKFELCSSLV 1318
>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
gi|7267743|emb|CAB78169.1| putative retrotransposon
[Arabidopsis thaliana]
Length = 1230
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +1
Query: 1 NPVFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKILNF 180
N V HDRTKHID+++H IR+V+A G+V ++KI + N AD+ TK +PVSKF T L L
Sbjct: 1168 NNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNSADIFTKVVPVSKFKTALHSLRV 1227
Query: 181 DT 186
T
Sbjct: 1228 KT 1229
>emb|CCI55401.1| PH01B015M02.2 [Phyllostachys edulis]
Length = 1655
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = +1
Query: 7 VFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
+FH+RTKHIDV++HYI+DV+++G V + KI + NPADM TK +P++KF C ++
Sbjct: 1596 MFHERTKHIDVKYHYIQDVISQGNVKVCKISTYDNPADMMTKSVPITKFELCSNLV 1651
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 67.0 bits (162), Expect = 2e-09
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = +1
Query: 7 VFHDRTKHIDVRFHYIRDVVAKGIVCLEKIPSEFNPADMGTKCLPVSKFLTCLKIL 174
+FH+RTKHID+++HY+RDVVA+G + + KI + NP DM TK +PV+KF C ++
Sbjct: 1116 MFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMTKHVPVAKFELCSSLV 1171