BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00015785
         (321 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]    76   5e-12
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]    74   3e-11
emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]    71   2e-10
emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]    70   4e-10
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]    66   5e-09
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    65   1e-08
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    64   3e-08
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc...    57   2e-06
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]    57   2e-06
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo...    57   3e-06
gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-...    56   6e-06
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    56   6e-06
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    56   6e-06
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    56   6e-06
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    56   6e-06
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      55   9e-06
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    55   9e-06

>emb|CAN80993.1| hypothetical protein VITISV_022128 [Vitis vinifera]
          Length = 1017

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSENDTPNK 170
           KC+FLGYPEGVKGYRLW K  PG K++ISRDV FNE+E+  +    + +E D+ N+
Sbjct: 184 KCIFLGYPEGVKGYRLWYKESPGVKIIISRDVMFNENEILSMRTNTAGTEEDSKNR 239


>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
          Length = 817

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 31/56 (55%), Positives = 42/56 (75%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSENDTPNK 170
           KC+FLG+PEGVKGYRLW K  PG K++ISRDV FNE+EM  +    + ++ D+ N+
Sbjct: 244 KCIFLGHPEGVKGYRLWNKESPGVKIIISRDVVFNENEMLSMRTNTAGTKEDSENR 299


>emb|CAN69199.1| hypothetical protein VITISV_025494 [Vitis vinifera]
          Length = 540

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSENDTPNK 170
           KC+FLGYPEGVKGY+LW K   G K++ISRDV FNE+EM  +    +  + D+ NK
Sbjct: 368 KCIFLGYPEGVKGYKLWNKESSGVKIIISRDVVFNENEMLFMRTNTAGIKKDSKNK 423


>emb|CAN72238.1| hypothetical protein VITISV_010775 [Vitis vinifera]
          Length = 807

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSE--NDTPNKVE 176
           KC+FLGYP+GVKGY+LW+++Q   K +ISRDVTFNE +MP  T P  D E  N    +VE
Sbjct: 426 KCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMPKQT-PAKDVEGSNQLQFEVE 484

Query: 177 H 179
           H
Sbjct: 485 H 485


>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
          Length = 735

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDS------- 149
           KC+FLGYP+GVKGY+LW+++Q   K +ISRDVTFNE +M    P   +  SD        
Sbjct: 247 KCIFLGYPKGVKGYKLWIETQGKRKCIISRDVTFNEQDMSKQTPTKYVEGSDQLQFEVEH 306

Query: 150 ENDTPNKVEHVPSVDIFPDAVVHENHE 230
           EN  P K +   S  +  + +VHE  +
Sbjct: 307 ENLQPKKFKETSSKTV-QEEIVHERQD 332


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSE--NDTPNKVE 176
           KC+FLGYP+GVKGY+LW+++Q   K +ISRDVTFNE +M   T P  D E  +    +VE
Sbjct: 639 KCIFLGYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQT-PAKDVEGLDQLQFEVE 697

Query: 177 H 179
           H
Sbjct: 698 H 698


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 29/52 (55%), Positives = 35/52 (67%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSEND 158
           KC+FLGY EGVKGYRLW K   G K++IS DV FNE+EM  +      +E D
Sbjct: 351 KCIFLGYLEGVKGYRLWNKESMGVKIIISHDVVFNENEMLSMRTNTVGTEGD 402


>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNES----EMPCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES    + P   +P+ +S+  T  +
Sbjct: 423 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPV-ESQEKTSVQ 479

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 480 VEHLISSGHAPE 491


>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
          Length = 626

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/53 (49%), Positives = 31/53 (58%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSENDT 161
           KC+FLGY +G+KGY+LW       K +IS DV FNE  MP    P SD    T
Sbjct: 272 KCIFLGYSDGIKGYKLWCIEPGNEKCVISXDVVFNEVNMPLSKAPKSDHTQXT 324


>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 1822

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEMPCLTMPLSDSE 152
           KC+F+GYPEGVKGY+LW K     K  ISRDV F E+E    TM    S+
Sbjct: 136 KCMFVGYPEGVKGYKLWCKYGNTSKSFISRDVVFRETEYYMATMTQGGSD 185


>gb|AAX96781.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77549746|gb|ABA92543.1|
           retrotransposon protein, putative, Ty1-copia subclass,
           expressed [Oryza sativa Japonica Group]
          Length = 1170

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 13/90 (14%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES M    P   +P+ +S+     +
Sbjct: 716 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLYDNPSTNVPV-ESQEKASVQ 772

Query: 171 VEHVPS---------VDIFPDAVVHENHEN 233
           VEH+ S         V I  DA V E+ ++
Sbjct: 773 VEHLISSGHALEKEDVAINQDAPVSEDSDS 802


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3    KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDSENDTPNK 170
            KC+FLGYP GVKGY+LW       KV+ISR+V F+ES M    P   +P+ +S+     +
Sbjct: 888  KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKPSTNVPV-ESQEKASVQ 944

Query: 171  VEHVPSVDIFPD 206
            VEH+ S    P+
Sbjct: 945  VEHLISSGHAPE 956


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES M    P   +P+ +S+     +
Sbjct: 642 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKPSTNVPV-ESQEKASVQ 698

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 699 VEHLISSGHAPE 710


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES M    P   +P+ +S+     +
Sbjct: 681 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKPSTNVPV-ESQEKASVQ 737

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 738 VEHLISSGHAPE 749


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNESEM----PCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES M    P   +P+ +S+     +
Sbjct: 679 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKPSTNVPV-ESQEKASVQ 735

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 736 VEHLISSGHAPE 747


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNES----EMPCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES    + P   +P+ +S+     +
Sbjct: 716 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPV-ESQEKASVQ 772

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 773 VEHLISSGHAPE 784


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
 Frame = +3

Query: 3   KCVFLGYPEGVKGYRLWLKSQPGFKVLISRDVTFNES----EMPCLTMPLSDSENDTPNK 170
           KC+FLGYP GVKGY+LW       KV+ISR+V F+ES    + P   +P+ +S+     +
Sbjct: 716 KCIFLGYPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKPSTNVPV-ESQEKASVQ 772

Query: 171 VEHVPSVDIFPD 206
           VEH+ S    P+
Sbjct: 773 VEHLISSGHAPE 784