BLASTX nr result
ID: Rehmannia23_contig00015444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00015444
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, pa... 90 3e-16
gb|EOY11411.1| DNA excision repair protein ERCC-1 isoform 3 [The... 90 3e-16
gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [The... 90 3e-16
gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [The... 90 3e-16
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-... 90 4e-16
gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe... 83 4e-14
ref|XP_006472002.1| PREDICTED: DNA excision repair protein ERCC-... 81 2e-13
ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-... 81 2e-13
ref|XP_006433266.1| hypothetical protein CICLE_v10002028mg [Citr... 81 2e-13
ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-... 79 6e-13
ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-... 79 8e-13
gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis] 78 1e-12
ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-... 77 3e-12
ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-... 76 4e-12
ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citr... 76 4e-12
ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citr... 73 3e-11
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|5... 73 3e-11
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-... 72 8e-11
ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-... 71 2e-10
gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus... 70 4e-10
>gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, partial [Theobroma
cacao]
Length = 298
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR + + E PI K A S SE E EK+T + SK+RK EPE++
Sbjct: 189 VKRLYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMN 248
Query: 177 VKSALKAAFAKYSGRKRKTPVQDEREEK 94
VKSAL AAFA+Y+G+ K + + +E+
Sbjct: 249 VKSALTAAFARYAGKISKKSTKSKGKER 276
>gb|EOY11411.1| DNA excision repair protein ERCC-1 isoform 3 [Theobroma cacao]
Length = 314
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR + + E PI K A S SE E EK+T + SK+RK EPE++
Sbjct: 205 VKRLYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMN 264
Query: 177 VKSALKAAFAKYSGRKRKTPVQDEREEK 94
VKSAL AAFA+Y+G+ K + + +E+
Sbjct: 265 VKSALTAAFARYAGKISKKSTKSKGKER 292
>gb|EOY11410.1| DNA excision repair protein ERCC-1 isoform 2 [Theobroma cacao]
Length = 398
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR + + E PI K A S SE E EK+T + SK+RK EPE++
Sbjct: 289 VKRLYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMN 348
Query: 177 VKSALKAAFAKYSGRKRKTPVQDEREEK 94
VKSAL AAFA+Y+G+ K + + +E+
Sbjct: 349 VKSALTAAFARYAGKISKKSTKSKGKER 376
>gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao]
Length = 409
Score = 90.1 bits (222), Expect = 3e-16
Identities = 46/88 (52%), Positives = 60/88 (68%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR + + E PI K A S SE E EK+T + SK+RK EPE++
Sbjct: 300 VKRLYDTFHEPFKRVISSNPPVPETPILKEAEPCSASEATEAEKDTEDTSKRRKKEPEMN 359
Query: 177 VKSALKAAFAKYSGRKRKTPVQDEREEK 94
VKSAL AAFA+Y+G+ K + + +E+
Sbjct: 360 VKSALTAAFARYAGKISKKSTKSKGKER 387
>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
gi|296088298|emb|CBI36743.3| unnamed protein product
[Vitis vinifera]
Length = 398
Score = 89.7 bits (221), Expect = 4e-16
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR VP+ ENP+ +A +S +E E E + + SK+RK EPEL+
Sbjct: 289 VKRLYDTFHEPFKRVVPSCPAVPENPVHNNAEPSSVNEVVEVENDVEDASKRRKKEPELT 348
Query: 177 VKSALKAAFAKYS---GRKRKTPVQDEREEK 94
VKSAL AAFA+YS G++ P + EEK
Sbjct: 349 VKSALSAAFAQYSEKIGKRNNRPQGKKHEEK 379
>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
Length = 398
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/88 (48%), Positives = 57/88 (64%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E +A S E +++ +ET + SK+RK EPEL+
Sbjct: 297 VKRLYDTFHEPFKRVVASRPAVPETSAPSNAEPGSVDEEDKEAEETEDESKRRKKEPELT 356
Query: 177 VKSALKAAFAKYSGRKRKTPVQDEREEK 94
VKSAL AF+KY+ + K + +REEK
Sbjct: 357 VKSALSVAFSKYADKVNKKNSKTQREEK 384
>ref|XP_006472002.1| PREDICTED: DNA excision repair protein ERCC-1-like isoform X2
[Citrus sinensis] gi|568835926|ref|XP_006472003.1|
PREDICTED: DNA excision repair protein ERCC-1-like
isoform X3 [Citrus sinensis]
Length = 269
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E P K +S +E + EK+T + +K+RK EPEL+
Sbjct: 164 VKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELT 223
Query: 177 VKSALKAAFAKYS---GRKRKTPVQ 112
VKSAL AAFAKY+ G+K+ + Q
Sbjct: 224 VKSALSAAFAKYADKIGKKKNSSSQ 248
>ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-1-like isoform X1
[Citrus sinensis]
Length = 335
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E P K +S +E + EK+T + +K+RK EPEL+
Sbjct: 230 VKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELT 289
Query: 177 VKSALKAAFAKYS---GRKRKTPVQ 112
VKSAL AAFAKY+ G+K+ + Q
Sbjct: 290 VKSALSAAFAKYADKIGKKKNSSSQ 314
>ref|XP_006433266.1| hypothetical protein CICLE_v10002028mg [Citrus clementina]
gi|557535388|gb|ESR46506.1| hypothetical protein
CICLE_v10002028mg [Citrus clementina]
Length = 295
Score = 80.9 bits (198), Expect = 2e-13
Identities = 44/85 (51%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E P K +S +E + EK+T + +K+RK EPEL+
Sbjct: 206 VKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTDVEKDTEDINKRRKKEPELT 265
Query: 177 VKSALKAAFAKYS---GRKRKTPVQ 112
VKSAL AAFAKY+ G+K+ + Q
Sbjct: 266 VKSALSAAFAKYADKIGKKKNSSSQ 290
>ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
Length = 393
Score = 79.0 bits (193), Expect = 6e-13
Identities = 51/101 (50%), Positives = 70/101 (69%), Gaps = 12/101 (11%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPN----PAHTVEN-PIDKHAGLTSESERN---EDEKE-TPEGSK 205
VKRL+DTFHEPFKR + P +V+N P + + +++E + ED++E T + SK
Sbjct: 284 VKRLFDTFHEPFKRVESSRQAIPETSVQNKPASPESSIRNKAESSSLIEDKQEDTEDVSK 343
Query: 204 QRKNEPELSVKSALKAAFAKYSGR--KRKTPVQ-DEREEKI 91
+RK EPE++VKSAL AAFAKYSGR KRK+ Q +E+EE I
Sbjct: 344 RRKKEPEVTVKSALSAAFAKYSGRVGKRKSTSQVEEKEESI 384
>ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
tuberosum]
Length = 392
Score = 78.6 bits (192), Expect = 8e-13
Identities = 48/94 (51%), Positives = 57/94 (60%), Gaps = 6/94 (6%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPN----PAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNE 190
VKRLYD FHEPFKR VP P +V N + H G S EDEKE + S K E
Sbjct: 286 VKRLYDAFHEPFKREVPKRQCIPETSVAN--ESHPG---SSNTKEDEKEIVDTSNSEKKE 340
Query: 189 PELSVKSALKAAFAKYSGR--KRKTPVQDEREEK 94
PE++VKSAL AAFAKYS + ++K Q+E E K
Sbjct: 341 PEVTVKSALSAAFAKYSHKITRKKNKSQEEEEGK 374
>gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]
Length = 407
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHA--GLTSESERNEDEKETPEGSKQRKNEPE 184
VKRLYD+FHEPFKR VP+ E +A G +E + ++EK+ + SK+RK EP+
Sbjct: 302 VKRLYDSFHEPFKRVVPSYPAVPETSTQNNAEVGSANEDKEAKEEKDREKESKRRKKEPQ 361
Query: 183 LSVKSALKAAFAKYSGRKRK 124
L+VKSAL AAF+KY+ + RK
Sbjct: 362 LTVKSALSAAFSKYADKVRK 381
>ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
lycopersicum]
Length = 390
Score = 76.6 bits (187), Expect = 3e-12
Identities = 48/95 (50%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPN----PAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNE 190
VKRLYD FHEPFKR VP P +V N + H G S EDEKE + S K E
Sbjct: 283 VKRLYDAFHEPFKREVPKRQCIPETSVAN--ESHPG---SSNTKEDEKEIVDTSNSAKKE 337
Query: 189 PELSVKSALKAAFAKYS---GRKRKTPVQDEREEK 94
PE++VKSAL AAFAKYS RK+ ++E E K
Sbjct: 338 PEVTVKSALSAAFAKYSHKITRKKNNKSREEEEGK 372
>ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-1-like [Citrus
sinensis]
Length = 394
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E P K +S +E E EK+T + +K+RK E E +
Sbjct: 289 VKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETEST 348
Query: 177 VKSALKAAFAKYS---GRKRKTPVQ 112
VKSAL AAFAKY+ G+K+ Q
Sbjct: 349 VKSALSAAFAKYADKIGKKKNRSSQ 373
>ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citrus clementina]
gi|557535385|gb|ESR46503.1| hypothetical protein
CICLE_v10001229mg [Citrus clementina]
Length = 430
Score = 76.3 bits (186), Expect = 4e-12
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + E P K +S +E E EK+T + +K+RK E E +
Sbjct: 325 VKRLYDTFHEPFKRVVSSHPPIPETPSQKDVERSSVNEVTEVEKDTEDVNKRRKKETEST 384
Query: 177 VKSALKAAFAKYS---GRKRKTPVQ 112
VKSAL AAFAKY+ G+K+ Q
Sbjct: 385 VKSALSAAFAKYADKIGKKKNRSSQ 409
>ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citrus clementina]
gi|557535386|gb|ESR46504.1| hypothetical protein
CICLE_v10003460mg [Citrus clementina]
Length = 199
Score = 73.2 bits (178), Expect = 3e-11
Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKR YDTFHEPFK V + E P K +S +E E EK+ + +K+RK E EL+
Sbjct: 114 VKRFYDTFHEPFKHVVSSHPPIPETPSQKDVEPSSVNEVTEVEKDAEDVNKRRKKELELT 173
Query: 177 VKSALKAAFAKYSGR--KRKTPVQD 109
VKSAL AAFAKY+ + K+K + D
Sbjct: 174 VKSALSAAFAKYADKMGKKKNSLYD 198
>ref|XP_002328427.1| predicted protein [Populus trichocarpa]
gi|566169303|ref|XP_006382624.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
gi|550337988|gb|ERP60421.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
Length = 382
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPELS 178
VKRLYDTFHEPFKR V + + P+ K +S E E E E +K RK EPEL+
Sbjct: 278 VKRLYDTFHEPFKRVVSSHPVVPQTPVQKDTEPSSVDEVAEMEMEEANANKHRKKEPELT 337
Query: 177 VKSALKAAFAKYSGRK 130
VKSAL +AFAK + K
Sbjct: 338 VKSALSSAFAKCATNK 353
>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
subsp. vesca]
Length = 380
Score = 72.0 bits (175), Expect = 8e-11
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPN-PAHTVENPIDKHAGLTSESERNEDEKETPEGSKQRKNEPEL 181
VK LYDTFHEPFKR V + PA + +P D +A S +E +++ K+T E SK RK EPE
Sbjct: 284 VKCLYDTFHEPFKRVVASRPAVSESSPPD-NAEPCSVTE-DKETKDTKEESKCRKKEPEP 341
Query: 180 SVKSALKAAFAKYSGR-KRKTP 118
+VKSAL AAFAKY+ R K+K+P
Sbjct: 342 TVKSALSAAFAKYADRVKKKSP 363
>ref|XP_004138378.1| PREDICTED: DNA excision repair protein ERCC-1-like [Cucumis
sativus]
Length = 391
Score = 70.9 bits (172), Expect = 2e-10
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPID-KHAGLTSESERNEDEKETPEGSKQRKNEPEL 181
V+RLYDTFHEPFKR V E P +S E++ D K E Q K EP+L
Sbjct: 294 VRRLYDTFHEPFKRVVSTHPAVPETPTQISTKPRSSNEEQDVDGKRIEEDGSQHKKEPKL 353
Query: 180 SVKSALKAAFAKYSGRKRKTPVQDEREEK 94
+VKSAL AAFAKY+ + K+ + +EK
Sbjct: 354 NVKSALSAAFAKYADKIAKSGSIPQEKEK 382
>gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
Length = 393
Score = 69.7 bits (169), Expect = 4e-10
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Frame = -3
Query: 357 VKRLYDTFHEPFKRAVPNPAHTVENPIDKHAGLTSESERN--------EDEKETPEG-SK 205
VKRL+DTFHEPFKR + T++ + S RN ED++E + SK
Sbjct: 295 VKRLFDTFHEPFKRVDSSRQATLDTSVQNKPASPGSSIRNNTESSSLIEDKQENVDDVSK 354
Query: 204 QRKNEPELSVKSALKAAFAKYSGRKRKTPVQDEREEK 94
++K EPE++VKSAL AAF KYS R K + EEK
Sbjct: 355 RKKKEPEVTVKSALSAAFTKYSDRVGKRKRTSQVEEK 391