BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00015442
         (2056 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]       730   0.0  
ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein...   710   0.0  
ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein...   708   0.0  
gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao...   686   0.0  
ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein...   684   0.0  
ref|XP_002519028.1| RNA polymerase-associated protein RTF1, puta...   681   0.0  
gb|EXB82802.1| RNA polymerase-associated protein RTF1-like prote...   678   0.0  
gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus...   678   0.0  
ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein...   677   0.0  
gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus pe...   668   0.0  
ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein...   666   0.0  
ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein...   663   0.0  
ref|XP_002305685.1| plus-3 domain-containing family protein [Pop...   645   0.0  
ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein...   644   0.0  
ref|XP_002316628.2| plus-3 domain-containing family protein [Pop...   644   0.0  
ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citr...   629   e-177
ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein...   629   e-177
ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein...   624   e-176
ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis th...   602   e-169
gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]               602   e-169

>gb|EPS59875.1| hypothetical protein M569_14929 [Genlisea aurea]
          Length = 643

 Score =  730 bits (1885), Expect = 0.0
 Identities = 396/617 (64%), Positives = 446/617 (72%), Gaps = 2/617 (0%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLEKLLLEAAGRTTT                                    Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRTTTSERNRPPSRRRRKHSNSDGGSDSRNDDSDGDHH---YSQRKPS 57

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 366
             SQVPLKKR DPTDRDD RSSQ+G                +GSDLYKDE+DREKL++LTE
Sbjct: 58   SSQVPLKKRFDPTDRDD-RSSQDGDEINSNHERDSDNDT-IGSDLYKDEEDREKLSKLTE 115

Query: 367  LEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNM-RSKAERAGALDELVKX 543
            LEREMILE RATK SDRDL EK KKRKG D+K SP KAHTR+  RSKAERAGALDELVK 
Sbjct: 116  LEREMILEGRATKISDRDLTEKLKKRKGHDKKLSPAKAHTRSSTRSKAERAGALDELVKR 175

Query: 544  XXXXXXXXXXXX-YSPVKRRSFTAATLXXXXXXXXXXXXXXXXXXXXXXMADSDDDKMAS 720
                         YSPVKRRSFTAATL                      + DSD+DK  S
Sbjct: 176  RRDAVKGGTTRSRYSPVKRRSFTAATLSSPSHSDSRSQSGEGESTGDGGIGDSDEDKTQS 235

Query: 721  ESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRSGPIYRLCVVRNVD 900
            +S VPTF+DIKEIT++RSKL KWFMEPFFDELI+GCFV+VGIGKSRSG +YRLCVVRNVD
Sbjct: 236  QSNVPTFDDIKEITVQRSKLLKWFMEPFFDELIIGCFVKVGIGKSRSGNVYRLCVVRNVD 295

Query: 901  ASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLPLKEEFDQWVREVERNGGH 1080
            +SDP R Y  +N+ THKYL++VWG+ESSAARWQM MIS+  P +EEFD W +EVER GG+
Sbjct: 296  SSDPSRAYDFENRKTHKYLSLVWGSESSAARWQMKMISNEAPKREEFDLWFKEVERTGGN 355

Query: 1081 MPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPLNVAAEKDRLRRALEIAKE 1260
            MPT+QEV EK+EA+++ N FVYSAATVKQM+QEKKSAT +P+NVA EKDRLRRA+E+A+E
Sbjct: 356  MPTRQEVSEKREALQRINRFVYSAATVKQMVQEKKSATHKPINVALEKDRLRRAMEVARE 415

Query: 1261 NDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRVENFKNASELKPVNTSLKA 1440
            NDD  E+  I+ +L ELE+SR+V EKDSKA KLAEMN +NR  NFKNASE+KPVNTSLKA
Sbjct: 416  NDDHDEMKEIQRKLSELESSRKVPEKDSKAAKLAEMNSKNRKANFKNASEMKPVNTSLKA 475

Query: 1441 GEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKL 1620
            GE GYDPFSRRWTRSRNYYV+NA+      NG A  A   +                 KL
Sbjct: 476  GEVGYDPFSRRWTRSRNYYVSNAATGIGEANGSANVASVAAT-----AAALEAAAGAGKL 530

Query: 1621 VDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPEND 1800
            VDT+APVDQGTESNLLH+FELPISLA LQ+ GGPQGAQAG MARKQ IEA YGVKVPEND
Sbjct: 531  VDTNAPVDQGTESNLLHDFELPISLAALQRLGGPQGAQAGLMARKQWIEANYGVKVPEND 590

Query: 1801 GRRHALTLTVSDYKRRR 1851
            GRRHALTLTVSDYKRRR
Sbjct: 591  GRRHALTLTVSDYKRRR 607


>ref|XP_004232840.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
            [Solanum lycopersicum] gi|460374083|ref|XP_004232841.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform 2 [Solanum lycopersicum]
          Length = 645

 Score =  710 bits (1833), Expect = 0.0
 Identities = 395/645 (61%), Positives = 446/645 (69%), Gaps = 29/645 (4%)
 Frame = +1

Query: 13   DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPSGS 192
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPHSSKRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 193  QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTELE 372
            QVPLKKRLDP +RDDD SS  G                +GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 373  REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 531
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 532  L--------------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 669
            +               K             YSP+KRRSFTAA+L                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHSNEG 241

Query: 670  XXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 846
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 847  GKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 1026
            G+SRSGPIYRLCVVRNVDASDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAMISDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISDSPP 361

Query: 1027 LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 1206
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1207 NVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 1386
            NVAAEKDRLRR +E+AK  +DE EV RIK+RL+ELE SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELEDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1387 ENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAIAALPGS- 1563
            ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRS NY+   AS  E      A+AA   + 
Sbjct: 482  ENFKNASELRPVNQLLKAGEAGYDPFSRRWTRSTNYFAKGASNGEAAA-AAALAAEDNNG 540

Query: 1564 ------NXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQKFGGPQ 1725
                                   KLVDT+APVDQGTESN LH+F+LPISLAVLQKFGG Q
Sbjct: 541  AGGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQKFGGSQ 600

Query: 1726 GAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            G QAGFMARKQ+IEA  G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 601  GGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 645


>ref|XP_006347073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Solanum
            tuberosum]
          Length = 652

 Score =  708 bits (1828), Expect = 0.0
 Identities = 393/651 (60%), Positives = 447/651 (68%), Gaps = 35/651 (5%)
 Frame = +1

Query: 13   DLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPSGS 192
            +L  LLLEAAGRT T                                    Y  RK SGS
Sbjct: 4    ELTDLLLEAAGRTNTGGRNRPPQSSRRHHKSSYSDDGSDSRDDDSDDGR-GYSGRKLSGS 62

Query: 193  QVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTELE 372
            QVPLKKRLDP +RDDD SS  G                +GSDLYKD+DDR+KLAQ+TELE
Sbjct: 63   QVPLKKRLDPQERDDDHSSH-GEGNDGDGYGNESDDDSIGSDLYKDDDDRQKLAQMTELE 121

Query: 373  REMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSK-------AERAGALDE 531
            REMIL  RA K+SDR LH+K  K + Q RK S P +H+R MRS        A+R  AL+E
Sbjct: 122  REMILTDRAAKKSDRSLHDKMIKDRAQPRKQSSPPSHSRGMRSSTRALDRAADRDDALNE 181

Query: 532  L--------------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXXXXXXX 669
            +               K             YSP+KRRSFTAATL                
Sbjct: 182  IRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHSNEG 241

Query: 670  XXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGI 846
                   M DSDDDK + ES++PTFEDIKEI+IRRSKLAKWFMEPFFDELIVGCFVRVGI
Sbjct: 242  DSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVRVGI 301

Query: 847  GKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSLP 1026
            G+SRSGPIYRLCVVRNVD+SDP+RQYKL+NKTT K+LNVVWGNE+SAARWQMAM+SDS P
Sbjct: 302  GRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSDSPP 361

Query: 1027 LKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRPL 1206
            L++EFDQWVREVER+GG MP+KQ+VLEKKEAI+K+N+FVYSA TVKQMLQ+KKSATWRPL
Sbjct: 362  LRDEFDQWVREVERSGGRMPSKQDVLEKKEAIQKSNTFVYSADTVKQMLQQKKSATWRPL 421

Query: 1207 NVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEMNRRNRV 1386
            NVAAEKDRLRR +E+AK  +DE EV RIK+RL+EL+ SR+VQEKD KA +LAEMNR+NRV
Sbjct: 422  NVAAEKDRLRRDMEVAKMKNDEAEVERIKARLQELDDSRKVQEKDDKARRLAEMNRKNRV 481

Query: 1387 ENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANAS-GAEVVGNGDAIAAL--- 1554
            ENFKNASEL+PVN  LKAG+AGYDPFSRRWTRS NY+   A+  AE   NG+  AA    
Sbjct: 482  ENFKNASELRPVNQLLKAGQAGYDPFSRRWTRSTNYFAKGANEEAEGASNGEVAAAAALA 541

Query: 1555 ---------PGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1707
                                         KLVDT+APVDQGTESN LH+F+LPISLAVLQ
Sbjct: 542  AEDNNGASGTADGGMAATAAALQAAAGAGKLVDTNAPVDQGTESNTLHDFDLPISLAVLQ 601

Query: 1708 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            KFGG QG QAGFMARKQ+IEA  G  VPENDGRRHALTL+VSDYKRRRGLL
Sbjct: 602  KFGGSQGGQAGFMARKQRIEATVGCSVPENDGRRHALTLSVSDYKRRRGLL 652


>gb|EOY28313.1| PAF1 complex component isoform 1 [Theobroma cacao]
            gi|508781058|gb|EOY28314.1| PAF1 complex component
            isoform 1 [Theobroma cacao]
          Length = 660

 Score =  686 bits (1769), Expect = 0.0
 Identities = 382/660 (57%), Positives = 440/660 (66%), Gaps = 42/660 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTGGRNRHSLPPSRRRREGSYSDGGSDSRDDDSDDDHGYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLAQ 357
            GSQVPLKKRLDP +RDDD+ SQE                    VG DLYK+EDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPAERDDDQGSQEEGDYDDGVSVHEGDSSDESDVGDDLYKNEDDRRKLAQ 120

Query: 358  LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 513
            +TELERE+IL  RA KR D+   EK + ++  DR     K +PP   +R +RS A   +R
Sbjct: 121  MTELERELILSERADKRGDKKFTEKIRSKRENDRPSRSRKETPPLPSSRGVRSSARSADR 180

Query: 514  AGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXX 642
            A A D+ +                 K              SPVKR+ FTA++L       
Sbjct: 181  AAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSSGSRGLSPVKRKPFTASSLSSSSQSD 240

Query: 643  XXXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDEL 816
                             M DSDDD+       PTF+DIKEITIRRSKLAKWFMEPFF+EL
Sbjct: 241  SESRSNSEDEGSTGDGGMVDSDDDRGMQGPDGPTFDDIKEITIRRSKLAKWFMEPFFEEL 300

Query: 817  IVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARW 996
            IVGC+VRVGIG+S+SGPIYRLC+VRNVDA++P+R YKL+NKTT+KYLNVVWGNESSAARW
Sbjct: 301  IVGCYVRVGIGRSKSGPIYRLCMVRNVDATEPERTYKLENKTTYKYLNVVWGNESSAARW 360

Query: 997  QMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQ 1176
            QMAMISDS P +EEF Q +RE+ER+GG MP+KQ+VLEKKEA++K  +FVYSAATVKQMLQ
Sbjct: 361  QMAMISDSPPQEEEFRQLIRELERSGGRMPSKQDVLEKKEALQKAKTFVYSAATVKQMLQ 420

Query: 1177 EKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIK 1356
            EKKS + RPLN+AAEKDRLRR LEIA+   DE EV RIK RL++LEASRQ QEKD+KA++
Sbjct: 421  EKKSTSSRPLNIAAEKDRLRRDLEIAQSKHDEAEVERIKMRLQQLEASRQAQEKDAKAVR 480

Query: 1357 LAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE--VVG 1530
            LAEMNR+NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYVA   GA+   V 
Sbjct: 481  LAEMNRKNRAENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVAKPPGADAAAVA 540

Query: 1531 NGDAIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFE 1680
            NGD I  +   N                          KLVDTSAPVD+GTESN+LH+FE
Sbjct: 541  NGDRIGVIASGNGNDARAAAEAGRAATVAALQEAAGAGKLVDTSAPVDEGTESNMLHDFE 600

Query: 1681 LPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            +PISL  LQ+FGGPQGA AGFMARKQ+IEA  G +VPENDGRRHALTLTVSDYKRRRGLL
Sbjct: 601  IPISLNALQRFGGPQGAVAGFMARKQRIEATVGCQVPENDGRRHALTLTVSDYKRRRGLL 660


>ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Glycine max] gi|571466984|ref|XP_006583809.1| PREDICTED:
            RNA polymerase-associated protein RTF1 homolog isoform X2
            [Glycine max]
          Length = 656

 Score =  684 bits (1764), Expect = 0.0
 Identities = 386/660 (58%), Positives = 448/660 (67%), Gaps = 42/660 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPSSRRRHDGAYSDGGSDSRDEDSDDELNYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 360
            GSQVPLKKRLDPT+RDDD  SQE                   +G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDCDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 361  TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 519
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKVAVPRKQSPPMSSSR-MRASARSADRS 179

Query: 520  ----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 651
                AL+EL             +             +SP KR+ FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGSRHFSPPKRKPFTSTSLSSSSHSESES 239

Query: 652  XXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 825
                          + DSDDD+  + S+ P+F+D+KEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIVDSDDDRALAGSEGPSFQDVKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 826  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1005
            CFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1006 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1185
            M+SDS PL+EEF QWV+EV+R+GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPLEEEFKQWVKEVDRSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1186 SATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAE 1365
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV RIK+RL ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKYDEAEVERIKTRLLELEASRQAKQKDAKALKLAE 479

Query: 1366 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVA-------------- 1503
            MNR+NR ENFKNASE+KPVNT LKAGEAGYDPFSRRWTRSRNYY A              
Sbjct: 480  MNRKNRFENFKNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNSVN 539

Query: 1504 -NASGAEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFE 1680
             N +GA   G G  + A  G                  KLVDTSAPVDQGTESN+LHNFE
Sbjct: 540  GNVAGAGSNGTGAPVTAEAG---MVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFE 596

Query: 1681 LPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            LPISLA+LQKFGG QGAQAGFMARKQ+IEA  G +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 597  LPISLALLQKFGGAQGAQAGFMARKQKIEATVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
            gi|223541691|gb|EEF43239.1| RNA polymerase-associated
            protein RTF1, putative [Ricinus communis]
          Length = 660

 Score =  681 bits (1757), Expect = 0.0
 Identities = 375/661 (56%), Positives = 445/661 (67%), Gaps = 43/661 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRNALPPSRRRREGSYSDGGSDSRDDDSDDDRGYSSRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLAQ 357
            GSQVPLKKRLDPT+RDDD+ SQ+                    VG DLYK+EDDR KLAQ
Sbjct: 61   GSQVPLKKRLDPTERDDDQGSQDEGDYDDGNSDREGDSSDGSDVGEDLYKNEDDRRKLAQ 120

Query: 358  LTELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ER 513
            ++ELEREMIL  RA K+ D++L E+ + ++  +R     K +PP   +R +R+ A   +R
Sbjct: 121  MSELEREMILSERADKKGDKNLTERIRSKRESERTTRSRKETPPLPSSRGVRTSARSADR 180

Query: 514  AGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXX 642
            A A D+ +                 K             +SP+KR+ FT+A+L       
Sbjct: 181  AAAKDDALNELKARRLKQQDPEAHRKLRDASRRGSGSRGFSPIKRKRFTSASLSSSSSES 240

Query: 643  XXXXXXXXXXXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 819
                            MADSDDD     S+ PTF+DI+EITIRRSKLAKWFMEP+F+ELI
Sbjct: 241  ESRSHSEDEGSTGDGGMADSDDDGEPG-SQGPTFDDIREITIRRSKLAKWFMEPWFEELI 299

Query: 820  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 999
            VGCFVRVGIG+S+SGPIYRLC+VRNVDA+DPDR YKL+NKTT+KYLNV+WGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKSGPIYRLCLVRNVDAADPDRPYKLENKTTYKYLNVIWGNESSAARWQ 359

Query: 1000 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1179
            MAMISDS P ++E+ QWVREVER+GG MPTKQ++LEKKEAI+K+N+FVYSAATVKQMLQE
Sbjct: 360  MAMISDSAPTEDEYKQWVREVERSGGRMPTKQDILEKKEAIRKSNTFVYSAATVKQMLQE 419

Query: 1180 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKL 1359
            KKSA+ RPLNVAAEKDRLRR LE+A+   D+ EV RI++R++ELEASRQ Q KD+KAI+L
Sbjct: 420  KKSASSRPLNVAAEKDRLRRELEVAQSKQDDAEVERIRARIQELEASRQTQGKDAKAIRL 479

Query: 1360 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE------ 1521
            AEMNR+NR ENF+NASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV+  +G +      
Sbjct: 480  AEMNRKNRAENFRNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVSKPAGGDAAAATN 539

Query: 1522 --------VVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNF 1677
                    V    ++ A +                    KLVDT+APVDQGTESN LHNF
Sbjct: 540  NEASGTVAVANKTESAAGVSAEAGMAATAAALEAAADAGKLVDTAAPVDQGTESNTLHNF 599

Query: 1678 ELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGL 1857
            ELPISL  LQKFGG QGAQAGFMARKQ+IEA  G +V END +RH LTLTVSDYKRRRGL
Sbjct: 600  ELPISLTALQKFGGAQGAQAGFMARKQRIEATIGCRVSENDEKRHVLTLTVSDYKRRRGL 659

Query: 1858 L 1860
            L
Sbjct: 660  L 660


>gb|EXB82802.1| RNA polymerase-associated protein RTF1-like protein [Morus notabilis]
          Length = 658

 Score =  678 bits (1750), Expect = 0.0
 Identities = 376/658 (57%), Positives = 442/658 (67%), Gaps = 40/658 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MA+LE LLLEAAGRT +                                    Y NRKPS
Sbjct: 1    MAELENLLLEAAGRTRSAGRNRHSIPPSRRRREGSYSDGGSDSRDDDSDDDRGYANRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 366
            GSQVPLKKRLDPT+ DDD+ S+E                 VGSDLYKD+DDR KLA++TE
Sbjct: 61   GSQVPLKKRLDPTEMDDDQGSEEEGDDDRGSDREGDSESDVGSDLYKDDDDRRKLAEMTE 120

Query: 367  LEREMILEARATKRSDRDLHEKFKKR---KG---QDRKGSP-PKAHTRNMRSKAERAGAL 525
            L+REMIL  RA+K+ D++L EK + +   KG   Q RK +P P +  R+    A+RA A 
Sbjct: 121  LQREMILLDRASKKEDKNLKEKLRPKWDNKGKATQSRKETPLPSSRVRSSARSADRAAAK 180

Query: 526  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 654
            D+ +                 K                 KR+S+TA +L           
Sbjct: 181  DDALNELRAKRLKQQDPEAHGKLRDASRGGSGSRNLLHNKRKSYTATSLSSSSQSDSESE 240

Query: 655  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 828
                         M DSDD++    S+  TF+DIKE+T+RRSKLAKW MEPFF+ELIVGC
Sbjct: 241  SQSEDEGSTGDGGMIDSDDERGIPGSEGLTFDDIKEVTVRRSKLAKWLMEPFFEELIVGC 300

Query: 829  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1008
            FVRVGIG+S+SGPIYRLC+VRNVDAS+PDRQYKLDNK THKYLNVVWGNE+SAARWQMAM
Sbjct: 301  FVRVGIGRSKSGPIYRLCMVRNVDASEPDRQYKLDNKITHKYLNVVWGNENSAARWQMAM 360

Query: 1009 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1188
            +SDS+P +EEF QWVREVER+GG MPTK ++L+KKE+IKK N+FVYSAATVKQMLQEKKS
Sbjct: 361  VSDSVPNEEEFKQWVREVERSGGRMPTKHDILDKKESIKKINTFVYSAATVKQMLQEKKS 420

Query: 1189 ATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEM 1368
            A+ RPLN+A EKDRLRR LE+A+  +DE EV RIK+RL+ELEASR+ ++ D+KAI+LAEM
Sbjct: 421  ASARPLNIALEKDRLRRELEVAQSKNDEVEVDRIKTRLQELEASRKAKQTDAKAIRLAEM 480

Query: 1369 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANA------SGAEVVG 1530
            NR+NRVENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYYV         SGA    
Sbjct: 481  NRKNRVENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYVGKPGEVKEDSGANAGN 540

Query: 1531 NGDAIAA--------LPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELP 1686
            NG +  A        +                    KLVDT+APVDQGT SN+LHNFELP
Sbjct: 541  NGASTDAENNGRHGIVAAEAGIAATEAALEAAADAGKLVDTNAPVDQGTVSNMLHNFELP 600

Query: 1687 ISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            ISL+VLQKFGGPQGAQAGFMARKQ+IEA  G +VPENDGRRHALTL+V DYKRRRGLL
Sbjct: 601  ISLSVLQKFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLSVGDYKRRRGLL 658


>gb|ESW31293.1| hypothetical protein PHAVU_002G226300g [Phaseolus vulgaris]
          Length = 654

 Score =  678 bits (1750), Expect = 0.0
 Identities = 383/658 (58%), Positives = 449/658 (68%), Gaps = 40/658 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTSGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQ 357
            GSQVPLKKRLDP++RDDD  SQE                    +G DLYKDEDDR KL++
Sbjct: 61   GSQVPLKKRLDPSERDDDLGSQEEADDDDGHSDHDGDSSDESNIGDDLYKDEDDRRKLSE 120

Query: 358  LTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG- 519
            +TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A  
Sbjct: 121  MTELQREMILSDRATKKDDKNLLGKIASKREKGKVSVPRKQSPPMSSSR-MRASARSADR 179

Query: 520  -----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXX 648
                 AL+EL             +             +SP KR+ FT+ +L         
Sbjct: 180  SAKNDALNELRAKRLKQQDPEAHRKLREASRNAGPRHFSPPKRKPFTSTSLSSSSHSESE 239

Query: 649  XXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIV 822
                           + DSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIV
Sbjct: 240  SRSHSDDEGSTGDGGIGDSDDDRALTGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIV 299

Query: 823  GCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQM 1002
            GCFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQM
Sbjct: 300  GCFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQM 359

Query: 1003 AMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEK 1182
            AM+SDS PL+EEF QWV+EV+R+GG MPTKQ+VLEKK+AI+K  +FVYSAATVKQMLQEK
Sbjct: 360  AMVSDSAPLEEEFKQWVKEVDRSGGRMPTKQDVLEKKQAIQKAITFVYSAATVKQMLQEK 419

Query: 1183 KSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLA 1362
            KSA+ RPLNVAAEKDRLRR LEIA+   DE EV RIK+RL+ELEASR  ++KD+KA+KLA
Sbjct: 420  KSASTRPLNVAAEKDRLRRELEIAQSKHDEAEVDRIKARLQELEASRHAKQKDAKALKLA 479

Query: 1363 EMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNG-- 1536
            EMNR+NR ENFKNASELKPVNT LKAGEAGYDPFSRRWTRSRNYY    + A   GN   
Sbjct: 480  EMNRKNRFENFKNASELKPVNTGLKAGEAGYDPFSRRWTRSRNYYTGEKAAA---GNNSV 536

Query: 1537 DAIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELP 1686
            + I A PG+N                          KLVDTSAPVDQGTESN+LHNFELP
Sbjct: 537  NGIVAGPGTNSTGAPVTAEAGLVATAAALEAAADAGKLVDTSAPVDQGTESNMLHNFELP 596

Query: 1687 ISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            ISLA+LQK+GG QGAQAGFMARKQ+IE+  G +V ENDGRRH+LTL+VSDYKRRRGLL
Sbjct: 597  ISLALLQKYGGAQGAQAGFMARKQRIESTVGFRVLENDGRRHSLTLSVSDYKRRRGLL 654


>ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
            max]
          Length = 656

 Score =  677 bits (1747), Expect = 0.0
 Identities = 382/657 (58%), Positives = 446/657 (67%), Gaps = 39/657 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT T                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTGTAGRNRHSLPPSRRRHDGAYSDGGSDSRDDDSDDELNYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 360
            GSQVPLKKRLDPT+RDDD  SQE                   +G DLYKDEDDR KL+++
Sbjct: 61   GSQVPLKKRLDPTERDDDLGSQEEADDDGRSDHDGDSSDESNIGDDLYKDEDDRRKLSEM 120

Query: 361  TELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG-- 519
            TEL+REMIL  RATK+ D++L  K   K+ KG+    RK SPP + +R MR+ A  A   
Sbjct: 121  TELQREMILSDRATKKDDKNLLGKIASKREKGKAAAPRKQSPPMSSSR-MRASARSADRS 179

Query: 520  ----ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 651
                AL+EL             +             +SP KR++FT+ +L          
Sbjct: 180  AKNDALNELRAKRLKQQDPEAHRRLREASRNAGPRHFSPPKRKTFTSTSLSSSSHSESES 239

Query: 652  XXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 825
                          +ADSDDD+  + S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELIVG
Sbjct: 240  RSHSDDEGSTGDGGIADSDDDRALAGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELIVG 299

Query: 826  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1005
            CFVRVGIG+S++GPIYRLC+V+NVDAS+PDRQYKL+NKTT+KYLNVVWGNESSAARWQMA
Sbjct: 300  CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMA 359

Query: 1006 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1185
            M+SDS P++EEF QWV+EV+ +GG MP+KQ+VLEKK+AI+K  +FVYSAATVKQMLQEKK
Sbjct: 360  MVSDSAPMEEEFKQWVKEVDCSGGRMPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKK 419

Query: 1186 SATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAE 1365
            SA+ RPLNVAAEKDRLRR LEIA+   DE EV RIK+RL+ELEASRQ ++KD+KA+KLAE
Sbjct: 420  SASTRPLNVAAEKDRLRRELEIAQSKHDEAEVERIKTRLQELEASRQAKQKDAKALKLAE 479

Query: 1366 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNG--D 1539
            MNR+NR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY A        GN   +
Sbjct: 480  MNRKNRFENFKNASELKPVNIGLKAGEAGYDPFSRRWTRSRNYYAAKPGEKAAAGNNIVN 539

Query: 1540 AIAALPGSN----------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPI 1689
               A  GSN                          KLVDTSAPVDQGTESN+LHNFELPI
Sbjct: 540  GNVAGAGSNATGAPVTAEAGMVATAAALEAAAGAGKLVDTSAPVDQGTESNMLHNFELPI 599

Query: 1690 SLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            SLA+LQK+GG  GAQAGFMARKQ+IE+  G +V ENDGRRHALTLTVSDYKRRRGLL
Sbjct: 600  SLALLQKYGGAPGAQAGFMARKQRIESTVGFRVSENDGRRHALTLTVSDYKRRRGLL 656


>gb|EMJ18830.1| hypothetical protein PRUPE_ppa002666mg [Prunus persica]
          Length = 646

 Score =  668 bits (1724), Expect = 0.0
 Identities = 371/654 (56%), Positives = 437/654 (66%), Gaps = 36/654 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT++                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTSSAGKSRHSHSSSRRRRGGSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 360
            G+QVPLKKRLDPT+ DD++ SQE                   VGSDLYKDEDDR KLA++
Sbjct: 61   GTQVPLKKRLDPTEMDDEQGSQEEGDYNDSGSDRGGDSNESDVGSDLYKDEDDRRKLAEM 120

Query: 361  TELEREMILEARATKRSDRDLHEKFKKRKGQDRKGSPPKAHTRNMRSKAERAGALDELV- 537
            +EL+RE+IL  RA K+ D+ L EKF+ +K        P +  R+    A+RA A D+ + 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKK---ETPPLPSSRVRSSARSADRAAAKDDALN 177

Query: 538  ----------------KXXXXXXXXXXXXXYSPVKRRSFTAA--TLXXXXXXXXXXXXXX 663
                            K             +S + R+SFTA   +               
Sbjct: 178  ELRAKRLKQQDPEAHRKLRDASRGSSGSRSFSHMTRKSFTAVGRSSSSQSDSDSRSHSED 237

Query: 664  XXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVG 843
                    M DSDD++    S+  TF+DIKEITIRRSKLAKW MEPFF+ELIVGCFVRVG
Sbjct: 238  DGSTGEDPMMDSDDER----SEGLTFDDIKEITIRRSKLAKWLMEPFFEELIVGCFVRVG 293

Query: 844  IGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAMISDSL 1023
            IG+S+SGPIYRLC+VRNVDASDPDR+YKL+NKTTHKYLNVVWGNE+SAARWQMAMISDS 
Sbjct: 294  IGRSKSGPIYRLCMVRNVDASDPDRKYKLENKTTHKYLNVVWGNENSAARWQMAMISDSA 353

Query: 1024 PLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKSATWRP 1203
            PL+EEF QWVREVER+GG +P+KQ+VLEKKEAIKK N+FVYSAATVKQM++EKKSA+ RP
Sbjct: 354  PLEEEFKQWVREVERSGGRLPSKQDVLEKKEAIKKINTFVYSAATVKQMIEEKKSASSRP 413

Query: 1204 LNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEMNRRNR 1383
            LN+A EKDRLRR LE+A+   D+ EV RIK+RL++LEA RQ Q KDSKA++LAEMNR+NR
Sbjct: 414  LNIALEKDRLRRELEVAQSKHDDAEVERIKTRLQQLEARRQSQGKDSKAVRLAEMNRKNR 473

Query: 1384 VENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV---------------ANASGA 1518
            VENFKNASELKPV T LKAGEAGYDPFSRRWTRSRNYYV               A+ + A
Sbjct: 474  VENFKNASELKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPGEQKGEAEAIVDADGALA 533

Query: 1519 EVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLA 1698
            ++  NG A+     +                 KL+DTSAPVD GTESNL+HNFELPISLA
Sbjct: 534  DIESNGTAVVGAVRAG-MAATAAALEAAAGAGKLIDTSAPVDFGTESNLMHNFELPISLA 592

Query: 1699 VLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
             LQKFGGPQGAQ GF+ARKQ+IEA  G +VPENDGRRHALTLTVSDYKRR GLL
Sbjct: 593  TLQKFGGPQGAQEGFLARKQRIEATVGCRVPENDGRRHALTLTVSDYKRRMGLL 646


>ref|XP_004505022.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502142571|ref|XP_004505023.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 658

 Score =  666 bits (1718), Expect = 0.0
 Identities = 377/659 (57%), Positives = 442/659 (67%), Gaps = 41/659 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTT-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 183
            MADLE LLLEAAGRT                                       YP+RKP
Sbjct: 1    MADLENLLLEAAGRTGGAAGRNRHSIPPSRRRRDGSYSDGGSDSRDDDSDDELNYPSRKP 60

Query: 184  SGSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLA 354
            SGSQVPLKKRLDPT+RDDD  SQE                    +G DLYKDEDDR KL+
Sbjct: 61   SGSQVPLKKRLDPTERDDDLGSQEEADDDDGRSDREGDSSDESNIGDDLYKDEDDRRKLS 120

Query: 355  QLTELEREMILEARATKRSDRDLHEKF--KKRKGQ---DRKGSPPKAHTRNMRSKAERAG 519
            +++EL+REMIL  RA+K+ D+ L  K   K+ KG+     K SPP + +R MR+ A  A 
Sbjct: 121  EMSELQREMILSDRASKKDDKSLLGKIASKREKGKAIMTGKQSPPLSSSR-MRASARSAD 179

Query: 520  ------ALDELV------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 645
                  AL+EL             +             +SP KR+SFT+A L        
Sbjct: 180  RSAKNVALNELRAKRLKQQDPEARRRLREASRNSGPRRFSPPKRKSFTSANLSSSSHSDS 239

Query: 646  XXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 819
                            +ADSDDD+  S S+ P+F+DIKEITIRRSKLAKWFMEPFF+ELI
Sbjct: 240  DSRSHSDDEGSTGDGGIADSDDDRALSGSEGPSFQDIKEITIRRSKLAKWFMEPFFEELI 299

Query: 820  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 999
            VGCFVRVGIG+S++GPIYRLC+V+NVD+SDPDRQYKL+N+TTHKYLNVVWGNESSAARWQ
Sbjct: 300  VGCFVRVGIGRSKTGPIYRLCMVKNVDSSDPDRQYKLENRTTHKYLNVVWGNESSAARWQ 359

Query: 1000 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1179
            MAM+SDS PL+EEF QWV+EVER+GG MPTKQ+VLEKK+AI+K  +FVYSA TVKQMLQE
Sbjct: 360  MAMVSDSFPLEEEFKQWVKEVERSGGRMPTKQDVLEKKQAIQKIITFVYSADTVKQMLQE 419

Query: 1180 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKL 1359
            KKS++ RPLNVAAEKDRLRR +EIA+  +DE EV RIK+R++ELEASR  + KD+KA+KL
Sbjct: 420  KKSSSSRPLNVAAEKDRLRREMEIAQSKNDEAEVERIKTRVQELEASRHAKVKDAKALKL 479

Query: 1360 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVA----------NA 1509
            AEMNR+NR ENFKNASEL+PVN  LKAGEAGYDPFSRRWTRSRNYYVA          N 
Sbjct: 480  AEMNRKNRFENFKNASELRPVNIGLKAGEAGYDPFSRRWTRSRNYYVAKPGEKAAARKNT 539

Query: 1510 SGAEVVGNGDAIAALP--GSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFEL 1683
            +   V   G  I  +P    +                KLVDTSAPVDQGTESN LHNFEL
Sbjct: 540  TNVLVADAGSNITGVPVTAESGVVATAAALEAAADAGKLVDTSAPVDQGTESNFLHNFEL 599

Query: 1684 PISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            PISLA+L K+GG QGAQAGFMARKQ++EA  G +V ENDGRRH LTL+V DYKRRRGLL
Sbjct: 600  PISLALLHKYGGAQGAQAGFMARKQRMEATVGFRVSENDGRRHVLTLSVGDYKRRRGLL 658


>ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
            sativus] gi|449517636|ref|XP_004165851.1| PREDICTED: RNA
            polymerase-associated protein RTF1 homolog [Cucumis
            sativus]
          Length = 660

 Score =  663 bits (1711), Expect = 0.0
 Identities = 371/661 (56%), Positives = 439/661 (66%), Gaps = 43/661 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT                                      Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNAAGRNRHSHPPSRRQREGSYSDAGSDSRDDDSDDDRGYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE---GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQ 357
            GSQVPLKKRLDPT+RDDD  SQE                    VG DLYKD+DDR KLA 
Sbjct: 61   GSQVPLKKRLDPTERDDDGGSQEEGEDEDVGSEREGDSSDESDVGDDLYKDDDDRRKLAG 120

Query: 358  LTELEREMILEARATKRSDRDLHEKFKKR--KGQD---RKGSPP--KAHTRNMRSKAERA 516
            ++EL+REMIL  RA+K++D+ L+E  + +  KG+    RK +PP   +  R+    A+RA
Sbjct: 121  MSELQREMILSDRASKKNDKHLYESLRAKMDKGKSAPSRKETPPLPSSRIRSSARSADRA 180

Query: 517  GALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 645
             A D+ +                 K             +SP KR+ FTA +L        
Sbjct: 181  AAKDDALNELRAKRLKQQDPEAHRKLRDASRGNANSRRFSPTKRKPFTAPSLSSSSQSES 240

Query: 646  XXXXXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELI 819
                            M DSDD++    S  PTFEDIKE+TIRRSKLAKW MEPFF+ELI
Sbjct: 241  ESRFQSDDEGSTGDGGMIDSDDERSIPGSDGPTFEDIKEVTIRRSKLAKWLMEPFFEELI 300

Query: 820  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 999
            VGCFVRVGIG+SRSGPIYRLC+VRNVDA++PDRQYKL+NK THKYLNV+WGNE+SAARWQ
Sbjct: 301  VGCFVRVGIGRSRSGPIYRLCLVRNVDATEPDRQYKLENKITHKYLNVIWGNEASAARWQ 360

Query: 1000 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1179
            MAM+SDS PL++E+ QWV+EVER GG M +KQ++LEKKEAI+K N+FVYSAATVKQMLQ+
Sbjct: 361  MAMVSDSAPLEDEYKQWVKEVERTGGRMLSKQDILEKKEAIQKVNNFVYSAATVKQMLQD 420

Query: 1180 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKL 1359
            KKSA+ RPLN+AAEKDRLRR +++A   +DE EV RIK+RL++LEASR++Q KD+KAI+L
Sbjct: 421  KKSASARPLNIAAEKDRLRREMDVAVSKNDEAEVERIKTRLQQLEASRRLQMKDAKAIRL 480

Query: 1360 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANA----SGAEVV 1527
            AEMNR+NRVENFKNASEL+P+   LKAGEAGYDPFSRRWTRSRNYYV+NA      AE  
Sbjct: 481  AEMNRKNRVENFKNASELRPLK-DLKAGEAGYDPFSRRWTRSRNYYVSNAGEANGAAEAA 539

Query: 1528 GNGDAI----------AALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNF 1677
            GN D +          A                      KLVDT+APVD GTESN LHNF
Sbjct: 540  GNSDNVTPALENTRTEAGGTSDAGMAATAAALEAAAGAGKLVDTNAPVDGGTESNSLHNF 599

Query: 1678 ELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGL 1857
            ELPISLA+LQKFGG  GAQAGF+ARKQ+IEA  G +VPENDGRRHALTLTVSDYKRRRGL
Sbjct: 600  ELPISLAMLQKFGGALGAQAGFLARKQRIEATVGRQVPENDGRRHALTLTVSDYKRRRGL 659

Query: 1858 L 1860
            L
Sbjct: 660  L 660


>ref|XP_002305685.1| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|222848649|gb|EEE86196.1| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 662

 Score =  645 bits (1665), Expect = 0.0
 Identities = 359/663 (54%), Positives = 437/663 (65%), Gaps = 45/663 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRT-TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 183
            MADLE LLLEAAGRT  +                                    Y NRKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSILPSRRRKREGSYSDGGSDSRDDDSDDDRGYANRKP 60

Query: 184  SGSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLA 354
            SGSQVPLKKRL+  +RD +  SQ+                    +G DLYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDGEEGSQDEGDYDGGGSDREGGSSDESDIGDDLYKDEDDRKKLA 120

Query: 355  QLTELEREMILEARATKRSDRDLHEKFKKRKGQD-----RKGSPPKAHTRNMRSKA---E 510
            Q++EL+RE+IL  RA K+ D+ L EK + ++  D     RK +PP   +R +RS A   +
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRLKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 511  RAGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXX 639
            RA A D+ +                 K             +S VK+ +FT+A+L      
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDVSRGSAGSRGFSQVKKNNFTSASLSSSSSE 240

Query: 640  XXXXXXXXXXXXXXXX-MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDEL 816
                             MADSD+D +   SK PT+EDIKEITIRR+KLAKWFMEP+F+EL
Sbjct: 241  SGSRSHSEDEGSTGDGGMADSDED-VEPGSKGPTYEDIKEITIRRTKLAKWFMEPWFEEL 299

Query: 817  IVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARW 996
            I+GCFVRVGIG+S+SGP+YRLC+VRNVDA++PD+ YKL+NK+T+KYLNV WG ++SAARW
Sbjct: 300  IIGCFVRVGIGRSKSGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADTSAARW 359

Query: 997  QMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQ 1176
            QMAM+SDS P +EE+ QWVREVE  GG +P+KQ++LEKKEAI+K+N+FVYSAATVKQMLQ
Sbjct: 360  QMAMVSDSGPTEEEYKQWVREVECGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQMLQ 419

Query: 1177 EKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIK 1356
            EKKSA+ RPLNVAAEKDRLRR LEIA+   DE EV RI +R++ELEASR  + KD+KAI+
Sbjct: 420  EKKSASSRPLNVAAEKDRLRRELEIAQSKHDEAEVERINARIEELEASRHAKVKDAKAIR 479

Query: 1357 LAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAE----- 1521
            LAEMNR+NRVENF+NASE+KPVNT LKAGEAGYDPFSRRWTRSRNYYV+  + A+     
Sbjct: 480  LAEMNRKNRVENFRNASEMKPVNTGLKAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVAT 539

Query: 1522 ----------VVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLH 1671
                      V  +   +A +                    KLVDTSAPVDQGTESN +H
Sbjct: 540  KISEANETVAVAASNQVVAGVMSEAGVAATEAALEAAADAGKLVDTSAPVDQGTESNTMH 599

Query: 1672 NFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRR 1851
            +FEL ISL  LQ+FGGPQGAQAGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRR
Sbjct: 600  SFELEISLIALQEFGGPQGAQAGFMARKQRIEATVGCRVPENDGRRHALTLTVGDYKRRR 659

Query: 1852 GLL 1860
            GLL
Sbjct: 660  GLL 662


>ref|XP_004293522.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Fragaria
            vesca subsp. vesca]
          Length = 657

 Score =  644 bits (1662), Expect = 0.0
 Identities = 367/662 (55%), Positives = 434/662 (65%), Gaps = 44/662 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADL+ LLLEAAGRT++                                    Y +RKPS
Sbjct: 1    MADLDDLLLEAAGRTSSGRKSRHSHSSSKRRRDDSYSDGGSDSRGDDSDDGRGYASRKPS 60

Query: 187  GSQVPLKKRLDPTDRDDDRSSQE--GXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQL 360
            GSQVPLKKRLDP++  D+  SQ+                   VGSDLYKDE+DR KLA++
Sbjct: 61   GSQVPLKKRLDPSEVGDEHDSQDEGDYNDSGSDRGGESNESDVGSDLYKDENDRRKLAEM 120

Query: 361  TELEREMILEARATKRSDRDLHEKFKKR--KG---QDRKGSPP--KAHTRNMRSKAERAG 519
            +EL+RE+IL  RA K+ D+ L EKF+ +  KG   Q RK +PP   +  R+    A+RA 
Sbjct: 121  SELQRELILSDRAQKKDDKSLKEKFRPKWDKGKATQSRKVTPPLPSSRVRSSARSADRAA 180

Query: 520  ALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXX 648
            A D+ +                 K             +S   ++SF+A            
Sbjct: 181  AKDDALNELRAKRLKQQDPEAHRKLRDVSRGSVGSKNFSHTIKKSFSAVRRSSSSQSDSE 240

Query: 649  XXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 828
                          A   DD+  ++    TFEDIKEITIRRS+LAKW MEPFF+ELIVGC
Sbjct: 241  SRSHSDDDGSSADDAIDSDDERGNQGL--TFEDIKEITIRRSRLAKWLMEPFFEELIVGC 298

Query: 829  FVRVGIGKSRSG-PIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1005
             VRVGIGK++SG PIYRLC V NVD+SDPDRQYKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 299  CVRVGIGKTKSGRPIYRLCSVCNVDSSDPDRQYKLENKTTHKYLNVVWGNENSAARWQMA 358

Query: 1006 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1185
            M+SDSLPL+EE+DQWVREVE+NGG +P+K++VLEKKEAIKKTN+FVYSA TVKQM+QEKK
Sbjct: 359  MVSDSLPLEEEYDQWVREVEKNGGRLPSKEDVLEKKEAIKKTNTFVYSAKTVKQMIQEKK 418

Query: 1186 SATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAE 1365
            SA+ RPLN+A EKDRLRR LEIA+   D+ EV RIK+RL++LEA +Q Q KDSKA++LAE
Sbjct: 419  SASSRPLNIALEKDRLRRELEIAQSKHDDAEVERIKARLEQLEARQQSQGKDSKAVRLAE 478

Query: 1366 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYV-----------ANAS 1512
            MNR+NRV+NFKNAS LKPV T LKAGEAGYDPFSRRWTRSRNYYV           ANA 
Sbjct: 479  MNRKNRVDNFKNASGLKPVKTGLKAGEAGYDPFSRRWTRSRNYYVSKPDEQKDDAEANAV 538

Query: 1513 GAEVV------GNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHN 1674
             AE +      G G  +A   G                  KL+DT APVDQGT SN LHN
Sbjct: 539  AAESLAEVETNGTGGVVAVRAG---LEATAAALEAAAGAGKLIDTMAPVDQGTSSNPLHN 595

Query: 1675 FELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRG 1854
            FELPISLA LQKFGGPQGAQ GFMARKQ+IEA  GV+VPE+DGRRHALTL+VSDYKRRRG
Sbjct: 596  FELPISLATLQKFGGPQGAQEGFMARKQRIEATVGVRVPEDDGRRHALTLSVSDYKRRRG 655

Query: 1855 LL 1860
            LL
Sbjct: 656  LL 657


>ref|XP_002316628.2| plus-3 domain-containing family protein [Populus trichocarpa]
            gi|550327599|gb|EEE97240.2| plus-3 domain-containing
            family protein [Populus trichocarpa]
          Length = 664

 Score =  644 bits (1661), Expect = 0.0
 Identities = 359/665 (53%), Positives = 435/665 (65%), Gaps = 47/665 (7%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRT-TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKP 183
            MADLE LLLEAAGRT  +                                    Y +RKP
Sbjct: 1    MADLENLLLEAAGRTGKSGRNRNSLPPSRRRKQEGSYSDGGSDSRDDGSDDDRGYASRKP 60

Query: 184  SGSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX---VGSDLYKDEDDREKLA 354
            SGSQVPLKKRL+  +RDD+  SQE                    +G DLYKDEDDR+KLA
Sbjct: 61   SGSQVPLKKRLETNERDDEGGSQEEGDYDDGGSDREGESSDGSDIGDDLYKDEDDRQKLA 120

Query: 355  QLTELEREMILEARATKRSDRDLHEKFKKRKGQD-----RKGSPPKAHTRNMRSKA---E 510
            Q++EL+RE+IL  RA K+ D+ L EK + ++  D     RK +PP   +R +RS A   +
Sbjct: 121  QMSELDRELILADRADKKGDKHLTEKIRSKRDNDKPTRSRKETPPLPSSRGVRSSARSAD 180

Query: 511  RAGALDELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXX 639
            RA A D+ +                 K             ++ VK+ +FT+A L      
Sbjct: 181  RAAAKDDALNELRAKRLKQQDPEAHRKLRDASRGSAGSRGFAQVKKNNFTSARLSSSSSE 240

Query: 640  XXXXXXXXXXXXXXXX---MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFD 810
                               MADSD+D     S+ PT+EDIKEITIRR+KLAKWFMEP+F+
Sbjct: 241  SESGSRSHSEDEGSTGDGGMADSDEDGDPG-SRGPTYEDIKEITIRRTKLAKWFMEPWFE 299

Query: 811  ELIVGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAA 990
            ELI+GCFVRVGIG+S++GP+YRLC+VRNVDA++PD+ YKL+NK+T+KYLNV WG +SSAA
Sbjct: 300  ELIIGCFVRVGIGRSKTGPVYRLCMVRNVDAAEPDKPYKLENKSTYKYLNVTWGADSSAA 359

Query: 991  RWQMAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQM 1170
            RWQMAM+SDS P +EE+ QWVRE ER GG +P+KQ++LEKKEAI+K+N+FVYSAATVKQM
Sbjct: 360  RWQMAMVSDSAPTEEEYKQWVREAERGGGRLPSKQDILEKKEAIRKSNTFVYSAATVKQM 419

Query: 1171 LQEKKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKA 1350
            LQEKKSA+ RPLNVAAEKDRLRR LEIA+   DE EV RI++R+ ELEASRQ + KD+KA
Sbjct: 420  LQEKKSASSRPLNVAAEKDRLRRELEIAQSRHDEAEVERIEARILELEASRQAKVKDAKA 479

Query: 1351 IKLAEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASG----- 1515
            ++LAEMNR+NRVENF+NASELKP+NT LKAGEAGYDPFSRRWTRSRNYYV+N +G     
Sbjct: 480  LRLAEMNRKNRVENFRNASELKPINTGLKAGEAGYDPFSRRWTRSRNYYVSNPAGGDDAV 539

Query: 1516 ----------AEVVGNGDAIAALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNL 1665
                      A V  +   +A     +                KLVDTSAPVDQGTESN 
Sbjct: 540  AASNSEANDTAAVADSDHVVAGAMSESGVAATAAALDAAADAGKLVDTSAPVDQGTESNT 599

Query: 1666 LHNFELPISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKR 1845
            +HNFEL ISL  LQKF GPQGA AGFMARKQ+IEA  G +V ENDGRRHALTLTV DYKR
Sbjct: 600  MHNFELEISLIALQKFRGPQGAHAGFMARKQRIEANVGCQVRENDGRRHALTLTVGDYKR 659

Query: 1846 RRGLL 1860
            RRGLL
Sbjct: 660  RRGLL 664


>ref|XP_006422902.1| hypothetical protein CICLE_v10028000mg [Citrus clementina]
            gi|557524836|gb|ESR36142.1| hypothetical protein
            CICLE_v10028000mg [Citrus clementina]
          Length = 643

 Score =  629 bits (1623), Expect = e-177
 Identities = 360/655 (54%), Positives = 426/655 (65%), Gaps = 37/655 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNR--GYGSRKPS 58

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 366
            GSQVPLKKRLDP +RDDD+ SQE                        +E D +   Q+TE
Sbjct: 59   GSQVPLKKRLDPAERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 367  LEREMILEARATKRSDRDLHEKFKKRKGQ----DRKGSPPKAHTRNMR---SKAERAGAL 525
            LEREM++  R  K+ D++L +KF+ R+ +      K +PP   +R+ R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 526  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 654
            D+ +                 +              SPVKR++FT A L           
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 655  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 828
                         MADSDDD      + PT++DIKEITIRRSKLAKWFMEPFF+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 829  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1008
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1009 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1188
            +SDS PL+EEF QW+REVERNGG MP+KQ+VLEKKE+I+K N+FVYSAATVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNGGRMPSKQDVLEKKESIQKINTFVYSAATVKQMLQEKKS 409

Query: 1189 ATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEM 1368
            A+ RPLNVAAEKDRLRR LE+A+   D+ ++ RIK RL+ELEASR  + KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDDVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1369 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVV--GNGDA 1542
            NR+NRVENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY++   G EV    NGD 
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK-PGEEVTAEANGDK 528

Query: 1543 IAALPGSN---------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISL 1695
                 G+N                         KLVDT+AP+D GTESN+LH+FEL ISL
Sbjct: 529  NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588

Query: 1696 AVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
              L+KFGGPQG  AGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 589  NALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_006486980.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Citrus sinensis] gi|568867309|ref|XP_006486981.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Citrus sinensis]
          Length = 643

 Score =  629 bits (1622), Expect = e-177
 Identities = 360/655 (54%), Positives = 426/655 (65%), Gaps = 37/655 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MADLENLLLEAAGRTNSAGRNRHSASSSKRRREGSYSGSDSRDDDSDDNR--GYGSRKPS 58

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 366
            GSQVPLKKRLDPT+RDDD+ SQE                        +E D +   Q+TE
Sbjct: 59   GSQVPLKKRLDPTERDDDQGSQEEGDYDGGASEHEGDS--------SNESDDDNHGQMTE 110

Query: 367  LEREMILEARATKRSDRDLHEKFKKRKGQ----DRKGSPPKAHTRNMR---SKAERAGAL 525
            LEREM++  R  K+ D++L +KF+ R+ +      K +PP   +R+ R     A+RA A 
Sbjct: 111  LEREMMIFERDDKKVDKNLRDKFRSRREERSTRSTKETPPLPSSRSARLAARSADRAAAK 170

Query: 526  DELV-----------------KXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXXX 654
            D+ +                 +              SPVKR++FT A L           
Sbjct: 171  DDALNELRAKRLKQQDPEAHRRLRDASRGGSGSRVLSPVKRKAFTPAGLSSSSQSESESR 230

Query: 655  XXXXXXXXXXX--MADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVGC 828
                         MADSDDD      + PT++DIKEITIRRSKLAKWFMEPFF+ELIVGC
Sbjct: 231  SHSDDEGSTGDGGMADSDDDGAPGSGR-PTYDDIKEITIRRSKLAKWFMEPFFEELIVGC 289

Query: 829  FVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMAM 1008
            FVRVGIG+S++GPIYRLC+VRNVDA++PDR YKL+N+TT KYLNV WGNESSAARWQMAM
Sbjct: 290  FVRVGIGRSKNGPIYRLCMVRNVDATEPDRSYKLENRTTCKYLNVTWGNESSAARWQMAM 349

Query: 1009 ISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKKS 1188
            +SDS PL+EEF QW+REVERN G MP+KQ+VLEKK++I+K N+FVYSAATVKQMLQEKKS
Sbjct: 350  VSDSPPLEEEFKQWLREVERNSGRMPSKQDVLEKKDSIQKINTFVYSAATVKQMLQEKKS 409

Query: 1189 ATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAEM 1368
            A+ RPLNVAAEKDRLRR LE+A+   DE ++ RIK RL+ELEASR  + KD+KAI+LAEM
Sbjct: 410  ASSRPLNVAAEKDRLRRELEVAQSRHDEVDMERIKKRLQELEASRDSKVKDAKAIRLAEM 469

Query: 1369 NRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVV--GNGDA 1542
            NR+NRVENFKNASELK VNTSLKAGEAGYDPFSRRWTRSRNYY++   G EV    NGD 
Sbjct: 470  NRKNRVENFKNASELKRVNTSLKAGEAGYDPFSRRWTRSRNYYISK-PGEEVTAEANGDK 528

Query: 1543 IAALPGSN---------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISL 1695
                 G+N                         KLVDT+AP+D GTESN+LH+FEL ISL
Sbjct: 529  NGVPGGANGEEGATGEVGMAATEAALEAAAGAGKLVDTNAPLDLGTESNMLHDFELDISL 588

Query: 1696 AVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
              L+KFGGPQG  AGFMARKQ+IEA  G +VPENDGRRHALTLTV DYKRRRGLL
Sbjct: 589  NALKKFGGPQGVLAGFMARKQRIEATVGCQVPENDGRRHALTLTVGDYKRRRGLL 643


>ref|XP_004493842.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform X1
            [Cicer arietinum] gi|502110282|ref|XP_004493843.1|
            PREDICTED: RNA polymerase-associated protein RTF1 homolog
            isoform X2 [Cicer arietinum]
          Length = 653

 Score =  624 bits (1610), Expect = e-176
 Identities = 357/659 (54%), Positives = 424/659 (64%), Gaps = 41/659 (6%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            MADLEKLLLEAAGR                                       Y  RKPS
Sbjct: 1    MADLEKLLLEAAGRNI---HSLTPSRRKRRGEFLDGGSDSGDDDSDDDGDDHGYRGRKPS 57

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXXVGSDLYKDEDDREKLAQLTE 366
             +QVPLKKR + + +DDD S   G                VG DLYKDEDDR+KL+++TE
Sbjct: 58   ATQVPLKKRFETSGKDDDVS---GDDDGSDREGDSSEDSDVGDDLYKDEDDRQKLSEMTE 114

Query: 367  LEREMILEARATKRSDRDLHEKF--KKRKGQ----DRKGSPP--------KAHTRNMRSK 504
            L+REMIL  RA+K+ D+D   K   K+ KG      R+ SPP        +A  R+    
Sbjct: 115  LQREMILSDRASKKDDKDFLGKIASKREKGAKATLSRRESPPPPLLSSRVRASARSADRS 174

Query: 505  AERAGALDEL-----------VKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXXXX 651
            A + GAL+EL            K                +K + F +  L          
Sbjct: 175  AAKDGALNELRAKRLKQLDPEAKLKLKEGSKSGGRGLFSLKGKPFASTGLSSSSHSDSDS 234

Query: 652  XXXXXXXXXXXX--MADSDDDKMASES--KVPTFEDIKEITIRRSKLAKWFMEPFFDELI 819
                          + DSDDD++ + S  +VP+FEDIKEITIRRSKLAKWFMEPFF+ELI
Sbjct: 235  RSRSDDEGSNGDGGIIDSDDDRIMTGSGFEVPSFEDIKEITIRRSKLAKWFMEPFFEELI 294

Query: 820  VGCFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQ 999
            VGCFVRVGIG+S++GPIYRLC+V+NVDASDPDRQYKLDNKTT+KYLNVVWGNE+SAARWQ
Sbjct: 295  VGCFVRVGIGRSKTGPIYRLCMVKNVDASDPDRQYKLDNKTTYKYLNVVWGNETSAARWQ 354

Query: 1000 MAMISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQE 1179
            MAM+SDS PL+EEF QWV+EVER+GG M  K +V+EK +AI+K NSFVYSAATVKQM++E
Sbjct: 355  MAMVSDSPPLEEEFKQWVKEVERSGGRMLMKLDVMEKNQAIQKINSFVYSAATVKQMIEE 414

Query: 1180 KKSATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKL 1359
            KKS + RPLNVAAEKDRL+R LEIA+   D  EV +IK+RL+ELEASR+ Q KD+KA++L
Sbjct: 415  KKSNSRRPLNVAAEKDRLKRQLEIAESKKDAAEVEKIKTRLQELEASRKTQAKDAKALRL 474

Query: 1360 AEMNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGN-- 1533
            +EMNR+NR ENFKNASELKPVN  LKAGEAGYDPFSRRWTRSRNYY A  +     GN  
Sbjct: 475  SEMNRKNRFENFKNASELKPVNKGLKAGEAGYDPFSRRWTRSRNYYNAKQAEEAAAGNNS 534

Query: 1534 -GDAI---------AALPGSNXXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFEL 1683
             G A+         A + G                  KLVDT APVDQGTESN LHNFEL
Sbjct: 535  SGGAVGDRGSNGVGATVAGEAGVVATAEALEAAADAGKLVDTRAPVDQGTESNFLHNFEL 594

Query: 1684 PISLAVLQKFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            PISL +LQKFGG QG  AGF+A+KQ+IE + G +VPENDG+ H LTLTVSDYKRRRGLL
Sbjct: 595  PISLTILQKFGGAQGVHAGFIAKKQRIEEIVGFRVPENDGKSHMLTLTVSDYKRRRGLL 653


>ref|NP_176299.1| Paf1C-like transcription factor [Arabidopsis thaliana]
            gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein;
            78902-80833 [Arabidopsis thaliana]
            gi|332195649|gb|AEE33770.1| Paf1C-like transcription
            factor [Arabidopsis thaliana]
          Length = 643

 Score =  602 bits (1553), Expect = e-169
 Identities = 339/651 (52%), Positives = 409/651 (62%), Gaps = 33/651 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            M DLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSRHPPSSRRREGSYSDGSSDSRDDSDEDR---GYASRKPS 57

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX--VGSDLYKDEDDREKLAQL 360
            GSQVPLKKRL+  +R+D  +  EG                   G DLYK+E+DR+KLA +
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 361  TELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ERA 516
            TE +REMIL  RA K+ D++  EK + ++  ++     K + P   +R +RS A   +RA
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 517  GALDE-----------------LVKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 645
             A D+                 L K             +S  KR+   ++ L        
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 646  XXXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 825
                          M DSDDD+    S VPTFED+KE+TIRRSKLAKW MEPFF+ELIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 826  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1005
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1006 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1185
            MISD  PL+EE+ QW+REVER  G MPTKQ++ EKKEAI++TNSFVYSA TVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 1186 SATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAE 1365
            SA+ RP+NVAAEKDRLR+ LEIA+  +DE  V RIKS++K+L+ASR  +  D KA+KLAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 1366 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAI 1545
            MN++NR ENFKNASE+K +  SLKAGEAGYDPFSRRWTRS NYY     G +   N  A+
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAAV 532

Query: 1546 AALPGSN------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1707
            AA   +N                      KL+DT AP+ QG E N LHNFEL +SL  LQ
Sbjct: 533  AAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTALQ 592

Query: 1708 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            K+GGPQG Q  FMARKQ  EA  G +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 593  KYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643


>gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
          Length = 643

 Score =  602 bits (1553), Expect = e-169
 Identities = 339/651 (52%), Positives = 409/651 (62%), Gaps = 33/651 (5%)
 Frame = +1

Query: 7    MADLEKLLLEAAGRTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYPNRKPS 186
            M DLE LLLEAAGRT +                                    Y +RKPS
Sbjct: 1    MGDLENLLLEAAGRTNSAGRSSHPPSSRRREGSYSDGSSDSRDDSDEDR---GYASRKPS 57

Query: 187  GSQVPLKKRLDPTDRDDDRSSQEGXXXXXXXXXXXXXXXX--VGSDLYKDEDDREKLAQL 360
            GSQVPLKKRL+  +R+D  +  EG                   G DLYK+E+DR+KLA +
Sbjct: 58   GSQVPLKKRLE-AEREDRAARVEGGYGDGPSDREGDSSEESDFGDDLYKNEEDRQKLAGM 116

Query: 361  TELEREMILEARATKRSDRDLHEKFKKRKGQDR-----KGSPPKAHTRNMRSKA---ERA 516
            TE +REMIL  RA K+ D++  EK + ++  ++     K + P   +R +RS A   +RA
Sbjct: 117  TEFQREMILSERADKKGDKNFTEKLRSKRESEKTPVSKKETQPLPASRGVRSSARSADRA 176

Query: 517  GALDE-----------------LVKXXXXXXXXXXXXXYSPVKRRSFTAATLXXXXXXXX 645
             A D+                 L K             +S  KR+   ++ L        
Sbjct: 177  AAKDDALNELRAKRMKQQDPAALRKLRDASKGGSGSRDFSSTKRKPLASSNLSSSSQSDS 236

Query: 646  XXXXXXXXXXXXXXMADSDDDKMASESKVPTFEDIKEITIRRSKLAKWFMEPFFDELIVG 825
                          M DSDDD+    S VPTFED+KE+TIRRSKLAKW MEPFF+ELIVG
Sbjct: 237  DSRSQSDDEGSNGGMLDSDDDR----SDVPTFEDVKEVTIRRSKLAKWLMEPFFEELIVG 292

Query: 826  CFVRVGIGKSRSGPIYRLCVVRNVDASDPDRQYKLDNKTTHKYLNVVWGNESSAARWQMA 1005
            CFVRVGIG+S+SGPIYRLC V+NVDA+DPD+ YKL+NKTTHKYLNVVWGNE+SAARWQMA
Sbjct: 293  CFVRVGIGRSKSGPIYRLCWVKNVDATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMA 352

Query: 1006 MISDSLPLKEEFDQWVREVERNGGHMPTKQEVLEKKEAIKKTNSFVYSAATVKQMLQEKK 1185
            MISD  PL+EE+ QW+REVER  G MPTKQ++ EKKEAI++TNSFVYSA TVKQMLQEKK
Sbjct: 353  MISDGHPLEEEYRQWIREVERTNGRMPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKK 412

Query: 1186 SATWRPLNVAAEKDRLRRALEIAKENDDETEVARIKSRLKELEASRQVQEKDSKAIKLAE 1365
            SA+ RP+NVAAEKDRLR+ LEIA+  +DE  V RIKS++K+L+ASR  +  D KA+KLAE
Sbjct: 413  SASVRPMNVAAEKDRLRKELEIAQSKNDEAGVERIKSKIKQLDASRNKKGVDKKALKLAE 472

Query: 1366 MNRRNRVENFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYVANASGAEVVGNGDAI 1545
            MN++NR ENFKNASE+K +  SLKAGEAGYDPFSRRWTRS NYY     G +   N  A+
Sbjct: 473  MNKKNRAENFKNASEVKSITASLKAGEAGYDPFSRRWTRSSNYYNGKNKGKDGEENEAAV 532

Query: 1546 AALPGSN------XXXXXXXXXXXXXXXXKLVDTSAPVDQGTESNLLHNFELPISLAVLQ 1707
            AA   +N                      KL+DT AP+ QG E N LHNFEL +SL  LQ
Sbjct: 533  AAAVETNGADAGAGVEATEAALEAAAEAGKLIDTRAPIGQGAEHNQLHNFELSLSLTALQ 592

Query: 1708 KFGGPQGAQAGFMARKQQIEAMYGVKVPENDGRRHALTLTVSDYKRRRGLL 1860
            K+GGPQG Q  FMARKQ  EA  G +V ENDG+RH LTLTVSDYKRRRGLL
Sbjct: 593  KYGGPQGVQKAFMARKQLTEATVGCRVAENDGKRHGLTLTVSDYKRRRGLL 643