BLASTX nr result

ID: Rehmannia23_contig00015366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00015366
         (365 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006602504.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    56   4e-06
ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g...    56   4e-06
ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-...    56   6e-06
ref|XP_006401327.1| hypothetical protein EUTSA_v10013652mg [Eutr...    56   6e-06
ref|XP_006452264.1| hypothetical protein CICLE_v10010191mg [Citr...    55   7e-06
gb|EOY12494.1| F-box/RNI superfamily protein, putative [Theobrom...    55   7e-06
ref|XP_004304925.1| PREDICTED: putative FBD-associated F-box pro...    55   7e-06

>ref|XP_006602504.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like isoform X2
           [Glycine max]
          Length = 307

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)
 Frame = -3

Query: 348 TSFTSIINRVMLYHKVQSINSFRLYYEGLDYSEYDLETWITTVIKRNVQNLDLDLHCEII 169
           T F   +  V+L H   +I  FRL     +YS  D+ TW+  V +R  + ++L L     
Sbjct: 79  TGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSLSLSRY 138

Query: 168 YVLPRCIFTCNTLVDLRL 115
             LPRC+F C+T+  ++L
Sbjct: 139 VALPRCLFHCDTVSVMKL 156


>ref|XP_003551381.1| PREDICTED: F-box/FBD/LRR-repeat protein At5g56420-like isoform X1
           [Glycine max]
          Length = 409

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/78 (33%), Positives = 41/78 (52%)
 Frame = -3

Query: 348 TSFTSIINRVMLYHKVQSINSFRLYYEGLDYSEYDLETWITTVIKRNVQNLDLDLHCEII 169
           T F   +  V+L H   +I  FRL     +YS  D+ TW+  V +R  + ++L L     
Sbjct: 79  TGFAEFVYSVLLLHDAPAIERFRLRCANPNYSARDIATWLCHVARRRAERVELSLSLSRY 138

Query: 168 YVLPRCIFTCNTLVDLRL 115
             LPRC+F C+T+  ++L
Sbjct: 139 VALPRCLFHCDTVSVMKL 156


>ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-like [Solanum
           tuberosum]
          Length = 474

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/79 (36%), Positives = 48/79 (60%)
 Frame = -3

Query: 348 TSFTSIINRVMLYHKVQSINSFRLYYEGLDYSEYDLETWITTVIKRNVQNLDLDLHCEII 169
           TSF   ++R +   +   I  FRL    + +S   + +W++TVI+ NVQ+LDL L  E  
Sbjct: 94  TSFMHFVHRFLQLREESDIKKFRLSCR-VCFSASHVCSWLSTVIRHNVQDLDLCLFVEEP 152

Query: 168 YVLPRCIFTCNTLVDLRLQ 112
           ++LP+C+F+  TL  L+L+
Sbjct: 153 FMLPQCVFSSKTLTSLKLE 171


>ref|XP_006401327.1| hypothetical protein EUTSA_v10013652mg [Eutrema salsugineum]
           gi|557102417|gb|ESQ42780.1| hypothetical protein
           EUTSA_v10013652mg [Eutrema salsugineum]
          Length = 422

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
 Frame = -3

Query: 357 NSDTSFTSIINRVMLYHKVQSINSFRLYYEGL-DYSEYDLETWITTVIKRNVQNLDLDLH 181
           NS   FT  ++R +L HK  ++ S  +    +   ++ D   W+   + R V+ L +  +
Sbjct: 57  NSCPKFTKFVDRSLLLHKAPTLESLHIKIGSMCQNADVDTGLWVRIAVDRCVRELSIS-Y 115

Query: 180 C--EIIYVLPRCIFTCNTLVDLRLQYCAIXXXXXXXXXXXXXXXXXXYVEYMVDETLPHL 7
           C  E    LP+C+FTC TLV L+L+  ++                   V+Y+ D++LP +
Sbjct: 116 CSGEEPIRLPKCLFTCRTLVVLKLENTSLVDASSYGCFPSLKTLHLLDVKYLDDQSLPQI 175

Query: 6   LS 1
           LS
Sbjct: 176 LS 177


>ref|XP_006452264.1| hypothetical protein CICLE_v10010191mg [Citrus clementina]
           gi|557555490|gb|ESR65504.1| hypothetical protein
           CICLE_v10010191mg [Citrus clementina]
          Length = 322

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = -3

Query: 342 FTSIINRVMLYHKVQSINSFRLYYEGLD-YSEYDLETWITTVIKRNVQNLDLDLHCEIIY 166
           F   +N V+L     SIN  R      +   +Y L  W++ V +RNVQ LDLD+  E   
Sbjct: 68  FKDFVNWVLLSQN-GSINIQRFLLSCFNCVDDYTLYRWLSAVAQRNVQVLDLDIISEESI 126

Query: 165 VLPRCIFTCNTLVDLRLQYC 106
            LPRC+ TC +LV L+L +C
Sbjct: 127 KLPRCLVTCESLVSLKLDFC 146


>gb|EOY12494.1| F-box/RNI superfamily protein, putative [Theobroma cacao]
          Length = 441

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 29/77 (37%), Positives = 46/77 (59%)
 Frame = -3

Query: 345 SFTSIINRVMLYHKVQSINSFRLYYEGLDYSEYDLETWITTVIKRNVQNLDLDLHCEIIY 166
           +F + ++RV+ YH +  ++ FR+   G     Y LE WI   ++ +V+ LDL + C+   
Sbjct: 69  NFMNFVDRVLFYH-IGVVDKFRIRCGGF-VDSYRLEGWIRYALQNDVRELDLSVACKKFN 126

Query: 165 VLPRCIFTCNTLVDLRL 115
           +LP  +FTC TLV LRL
Sbjct: 127 MLPIGVFTCGTLVALRL 143


>ref|XP_004304925.1| PREDICTED: putative FBD-associated F-box protein At5g56440-like
           [Fragaria vesca subsp. vesca]
          Length = 499

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
 Frame = -3

Query: 339 TSIINRVMLYHKVQSINSFRLYYEGLDYSEYDLETWITTVIKRNVQNLDLDLHCEI---- 172
           + +++RV+L+  + +I+ F L   G++   Y ++ WI T I+RNV  L+LDL        
Sbjct: 74  SGLVDRVLLFRNLSNIHKFHLACLGIEDYFYRIDAWICTAIRRNVVELELDLWTTPSNSY 133

Query: 171 --IYVLPRCIFTCNTLVDLRL 115
             +  LPR IF C TLV L+L
Sbjct: 134 TGLLKLPRSIFICKTLVVLKL 154


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