BLASTX nr result
ID: Rehmannia23_contig00015184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00015184
(425 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, put... 64 2e-08
gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, put... 64 2e-08
gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, put... 64 2e-08
ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat... 63 4e-08
ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat... 63 4e-08
ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
emb|CBI26532.3| unnamed protein product [Vitis vinifera] 62 1e-07
ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat... 62 1e-07
ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat... 60 3e-07
gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis] 59 5e-07
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat... 58 1e-06
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 56 6e-06
>gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, putative isoform 4
[Theobroma cacao] gi|508700993|gb|EOX92889.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 4 [Theobroma cacao]
Length = 490
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2
Query: 5 RYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
RYR A+KLLLSC+R GM+ LK+ QRAVL GL +G +A+K + K+RIA++L Y
Sbjct: 436 RYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPGEARKVQSKIRIARILNY 490
>gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
[Theobroma cacao] gi|508700991|gb|EOX92887.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 457
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2
Query: 5 RYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
RYR A+KLLLSC+R GM+ LK+ QRAVL GL +G +A+K + K+RIA++L Y
Sbjct: 403 RYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPGEARKVQSKIRIARILNY 457
>gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 505
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = +2
Query: 5 RYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
RYR A+KLLLSC+R GM+ LK+ QRAVL GL +G +A+K + K+RIA++L Y
Sbjct: 451 RYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPGEARKVQSKIRIARILNY 505
>ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Solanum lycopersicum]
Length = 460
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/54 (55%), Positives = 42/54 (77%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLL 163
+R+R A+KLLLSCIR GMR LK+D+R V+ GL +G +AKK + K+R+AK+L
Sbjct: 405 RRFRAASKLLLSCIRGGMRILKSDKRGVIDGLRGSGYSQEAKKIQSKIRLAKIL 458
>ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform 1 [Solanum lycopersicum]
gi|460373057|ref|XP_004232339.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform 2 [Solanum lycopersicum]
Length = 460
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
+R+R A+KLLLSCIR GMR LK+D+R V+ GL G +A+K + K+++AKLL+Y
Sbjct: 405 RRFRAASKLLLSCIRGGMRILKSDKRIVIDGLRSCGLTHEARKVQSKIQMAKLLHY 460
>ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform X1 [Solanum tuberosum]
gi|565383043|ref|XP_006357836.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X2 [Solanum tuberosum]
gi|565383045|ref|XP_006357837.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X3 [Solanum tuberosum]
Length = 460
Score = 62.8 bits (151), Expect = 5e-08
Identities = 30/56 (53%), Positives = 43/56 (76%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
+R+R A+KLLLSCIR GMR LK+D+R V+ GL G +A+K + K+++AKLL+Y
Sbjct: 405 RRFRAASKLLLSCIRGGMRILKSDKRIVVDGLRSCGLTHEARKVQSKIQMAKLLHY 460
>emb|CBI26532.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/56 (46%), Positives = 45/56 (80%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
+RYR A++LLL+C+R GM+ L+A+QR+V+ GL +G +A++ K K+R+A++L+Y
Sbjct: 386 RRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 441
>ref|XP_002274300.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Vitis vinifera]
Length = 457
Score = 61.6 bits (148), Expect = 1e-07
Identities = 26/56 (46%), Positives = 45/56 (80%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
+RYR A++LLL+C+R GM+ L+A+QR+V+ GL +G +A++ K K+R+A++L+Y
Sbjct: 402 RRYRHASRLLLACLRGGMKILRANQRSVIDGLCYSGYTSEARRLKSKIRLARILHY 457
>ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Solanum tuberosum]
Length = 460
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/55 (50%), Positives = 42/55 (76%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLY 166
+R+R A+KLLLSCIR GMR LK+D+R V+ GL +G +A+K + K+R+A +L+
Sbjct: 405 RRFRAASKLLLSCIRGGMRILKSDKRGVIDGLRGSGYSQEARKVQSKIRLATILH 459
>gb|EXB92364.1| hypothetical protein L484_021348 [Morus notabilis]
Length = 453
Score = 59.3 bits (142), Expect = 5e-07
Identities = 28/55 (50%), Positives = 43/55 (78%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLY 166
KRY+ AAKLLLSC++DGM+ L++ +RAVL GL +G +A K K ++R+A++L+
Sbjct: 399 KRYKCAAKLLLSCLKDGMKVLRSARRAVLDGLRGSGLIHEANKLKLELRMAQILH 453
>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = +2
Query: 2 KRYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAK 157
+R+R A+KLL+SC RDGM+ LKA +RAV+ GL +G +A+K K K+R+A+
Sbjct: 402 RRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTSEARKLKFKLRLAR 453
>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/55 (43%), Positives = 41/55 (74%)
Frame = +2
Query: 5 RYRLAAKLLLSCIRDGMRTLKADQRAVLKGLSLTGSKWDAKKFKQKMRIAKLLYY 169
R+ A+KLLLSC+R GM+ L + QR V+ GL +G + +A+K K K+++A++L++
Sbjct: 433 RFHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQKEARKLKSKIKLARMLHH 487