BLASTX nr result

ID: Rehmannia23_contig00013600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00013600
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366769.1| PREDICTED: translation initiation factor IF-...    94   2e-17
ref|XP_004243227.1| PREDICTED: translation initiation factor IF-...    92   7e-17

>ref|XP_006366769.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Solanum tuberosum]
          Length = 1010

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/72 (61%), Positives = 52/72 (72%)
 Frame = -2

Query: 220 GSVNMISFGNFDGSVCLVRSISFHRNGSSFRKFWSGNRWRYVGVCRYSVTTDFIEEQGTS 41
           GSV   S G F+GS  LVR +SF +N  S  + W G RWRYV VCRYSVTTDFI +QGTS
Sbjct: 11  GSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRYVSVCRYSVTTDFIADQGTS 70

Query: 40  VSLDSTSEGSKD 5
           +SLDS+S  +KD
Sbjct: 71  ISLDSSSSSNKD 82


>ref|XP_004243227.1| PREDICTED: translation initiation factor IF-2, chloroplastic-like
           [Solanum lycopersicum]
          Length = 1010

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 42/72 (58%), Positives = 52/72 (72%)
 Frame = -2

Query: 220 GSVNMISFGNFDGSVCLVRSISFHRNGSSFRKFWSGNRWRYVGVCRYSVTTDFIEEQGTS 41
           GSV   S G F+GS  LVR +SF +N  S  + W G RWRYV VCRYSVTTDF+ +QGTS
Sbjct: 11  GSVCGCSSGQFEGSFSLVRRVSFSKNFGSVNRIWGGKRWRYVSVCRYSVTTDFVADQGTS 70

Query: 40  VSLDSTSEGSKD 5
           +SL+S+S  +KD
Sbjct: 71  ISLESSSSSNKD 82


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