BLASTX nr result

ID: Rehmannia23_contig00013398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00013398
         (430 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|5...    63   4e-08
ref|XP_006377719.1| hypothetical protein POPTR_0011s10530g [Popu...    62   1e-07
ref|XP_002331319.1| f-box family protein [Populus trichocarpa]         62   1e-07
ref|XP_006377716.1| hypothetical protein POPTR_0011s10510g [Popu...    60   2e-07
ref|XP_002331320.1| f-box family protein [Populus trichocarpa]         60   2e-07
ref|XP_002331322.1| predicted protein [Populus trichocarpa]            60   3e-07

>ref|XP_002331321.1| predicted protein [Populus trichocarpa]
           gi|566194795|ref|XP_006377718.1| hypothetical protein
           POPTR_0011s10520g [Populus trichocarpa]
           gi|550328101|gb|ERP55515.1| hypothetical protein
           POPTR_0011s10520g [Populus trichocarpa]
          Length = 378

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVL-GMCSIRPANNLK 283
           I   I LP S+ L +LKTL L   +    NF+G++FS CPNLE L +  +C     N ++
Sbjct: 158 IDGGIALPKSLGLPSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC----LNTIE 209

Query: 284 ILDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
             +++ LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 210 NFNIHALNLKSLEILNWRYS-RIMRGCKVMLFAPKLTSFKFDGN 252


>ref|XP_006377719.1| hypothetical protein POPTR_0011s10530g [Populus trichocarpa]
           gi|550328102|gb|ERP55516.1| hypothetical protein
           POPTR_0011s10530g [Populus trichocarpa]
          Length = 418

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/103 (38%), Positives = 58/103 (56%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVLGMCSIRPANNLKI 286
           +   I LP S+ LQ+LKTL L        NF+G++FS CPNLE L +    +   N ++ 
Sbjct: 177 VDGGIALPKSLGLQSLKTLHLGGAR----NFDGKIFSTCPNLENLKIEDIYL---NTIEN 229

Query: 287 LDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
            +++ LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 230 FNIHALNLKSLEILNWRY-GRIMRGCKVMLFAPKLTSFKFYGN 271


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
          Length = 453

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/103 (38%), Positives = 58/103 (56%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVLGMCSIRPANNLKI 286
           +   I LP S+ LQ+LKTL L        NF+G++FS CPNLE L +    +   N ++ 
Sbjct: 177 VDGGIALPKSLGLQSLKTLHLGGAR----NFDGKIFSTCPNLENLKIEDIYL---NTIEN 229

Query: 287 LDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
            +++ LNLK+LEI +WR   R      + + APKL  F F G+
Sbjct: 230 FNIHALNLKSLEILNWRY-GRIMRGCKVMLFAPKLTSFKFYGN 271


>ref|XP_006377716.1| hypothetical protein POPTR_0011s10510g [Populus trichocarpa]
           gi|566194793|ref|XP_006377717.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
           gi|550328099|gb|ERP55513.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
           gi|550328100|gb|ERP55514.1| hypothetical protein
           POPTR_0011s10510g [Populus trichocarpa]
          Length = 378

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVL-GMCSIRPANNLK 283
           +   + LP S+ LQ+LKTL L   +    NF+G++FS CPNLE L +  +C     N ++
Sbjct: 158 VDGGLALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC----LNVIE 209

Query: 284 ILDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
             +++ L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 210 NFNIHALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFDGN 252


>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
          Length = 453

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVL-GMCSIRPANNLK 283
           +   + LP S+ LQ+LKTL L   +    NF+G++FS CPNLE L +  +C     N ++
Sbjct: 177 VDGGLALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC----LNVIE 228

Query: 284 ILDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
             +++ L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 229 NFNIHALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFDGN 271


>ref|XP_002331322.1| predicted protein [Populus trichocarpa]
          Length = 335

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +2

Query: 107 IRNSIELPMSVSLQNLKTLRLKSFEFSDWNFNGEVFSGCPNLETLVL-GMCSIRPANNLK 283
           +   + LP S+ LQ+LKTL L   +    NF+G++FS CPNLE L +  +C     N ++
Sbjct: 158 VDGGLALPKSLGLQSLKTLHLGGAQ----NFDGKIFSSCPNLENLTIEDIC----LNVIE 209

Query: 284 ILDVNCLNLKNLEIRHWRSPWRCFDEHIINVRAPKLAFFLFQGH 415
             +++ L+LK+LEI +WR   R      + + APKL  F F G+
Sbjct: 210 NFNIHALSLKSLEILNWRYN-RIKQGCKVMLVAPKLTSFKFYGN 252


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