BLASTX nr result
ID: Rehmannia23_contig00012940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00012940
(459 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS61306.1| hypothetical protein M569_13496 [Genlisea aurea] 109 3e-22
ref|XP_006364474.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 95 8e-18
ref|XP_004245969.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 92 5e-17
ref|XP_006481992.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 92 9e-17
ref|XP_002308856.2| zinc finger family protein [Populus trichoca... 90 3e-16
ref|XP_006380961.1| hypothetical protein POPTR_0006s03070g [Popu... 90 3e-16
gb|ACU24187.1| unknown [Glycine max] 89 8e-16
ref|XP_004486987.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 88 1e-15
ref|XP_002465271.1| hypothetical protein SORBIDRAFT_01g035310 [S... 88 1e-15
gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao] 88 1e-15
ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|XP_006650082.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 2e-15
ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group] g... 87 2e-15
ref|XP_006435652.1| hypothetical protein CICLE_v10031679mg [Citr... 87 3e-15
ref|XP_006435651.1| hypothetical protein CICLE_v10031679mg [Citr... 87 3e-15
ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 87 3e-15
gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 86 4e-15
ref|XP_006346709.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 86 4e-15
>gb|EPS61306.1| hypothetical protein M569_13496 [Genlisea aurea]
Length = 290
Score = 109 bits (273), Expect = 3e-22
Identities = 60/120 (50%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEI----------SGQ 310
S CAVCKE FELGS+VRKLPCKHLYHSDCIVPWLEQR SCPVCRQE+ GQ
Sbjct: 173 SMCAVCKEDFELGSQVRKLPCKHLYHSDCIVPWLEQRRSCPVCRQELIGHQQQETNGGGQ 232
Query: 309 RLGNDXXXXXXXXXXXXXXXXXXXXSDS---NHRETVERSSVSDRHDNQNAEYSYWPFEY 139
RL + N R TV+ + + D EYSYWPFEY
Sbjct: 233 RLREQQLVRSRRRRWSSFFWPFRLSRSNSSTNGRRTVQSNPYQE--DGHLGEYSYWPFEY 290
>ref|XP_006364474.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum] gi|565397806|ref|XP_006364475.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Solanum tuberosum]
Length = 300
Score = 95.1 bits (235), Expect = 8e-18
Identities = 49/129 (37%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGNDXXXXX 280
S C VCKE F LG++ KLPCKHLYHSDCI PWLEQ++SCPVCR+E+ ++ GND
Sbjct: 172 SHCPVCKEKFALGTKATKLPCKHLYHSDCITPWLEQKNSCPVCRKELIPEKSGNDHSSRN 231
Query: 279 XXXXXXXXXXXXXXXSDSNHRE-----------------------TVERSSVSDRHDNQN 169
+S+ + E SS + N
Sbjct: 232 SRSESRSSSRRVSARENSSQNQERRRPWSSLWNFGSSRSSSRSTPAAETSSQTSHQHNNY 291
Query: 168 AEYSYWPFE 142
+EYS WPFE
Sbjct: 292 SEYSNWPFE 300
>ref|XP_004245969.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Solanum
lycopersicum]
Length = 301
Score = 92.4 bits (228), Expect = 5e-17
Identities = 50/129 (38%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGNDXXXXX 280
S C VCKE F LG++ KLPCKHLYHSDCI PWL+Q++SCPVCR+E+ ++ GND
Sbjct: 173 SHCPVCKEKFALGTKATKLPCKHLYHSDCITPWLQQKNSCPVCRKELIPEKSGNDHSSRS 232
Query: 279 XXXXXXXXXXXXXXXSD---------------------SNHRET--VERSSVSDRHDNQN 169
+ S+ R T E SS + N
Sbjct: 233 SRSESRSSSRRVSARENISQNQERRRPWSSLWKFGSSRSSSRSTPAAETSSETSHQHNNY 292
Query: 168 AEYSYWPFE 142
+EYS WPFE
Sbjct: 293 SEYSNWPFE 301
>ref|XP_006481992.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Citrus sinensis] gi|568856865|ref|XP_006481993.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform X2 [Citrus sinensis]
gi|568856867|ref|XP_006481994.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform X3 [Citrus
sinensis]
Length = 309
Score = 91.7 bits (226), Expect = 9e-17
Identities = 51/127 (40%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEI------------- 319
S C VC++ FELGS R++PC H+YHSDCIVPWL Q +SCPVCRQE+
Sbjct: 183 SHCPVCQDKFELGSEARQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPLQGSSSSRIHQS 242
Query: 318 -SGQRL-------GNDXXXXXXXXXXXXXXXXXXXXSDSNHRETVERSSVSDRHDNQNAE 163
SGQ GN S SNH T E SS + +N +
Sbjct: 243 SSGQSRSTTFGSNGNGRENQGRRNLFSGFWPFRSSNSSSNHNGTTESSSPAMHENNPHMG 302
Query: 162 YSYWPFE 142
YS WPF+
Sbjct: 303 YSGWPFD 309
>ref|XP_002308856.2| zinc finger family protein [Populus trichocarpa]
gi|550335345|gb|EEE92379.2| zinc finger family protein
[Populus trichocarpa]
Length = 308
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/124 (40%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ---------- 310
S C VCK+ FELGS R++PC HLYHSDCIVPWL Q +SCPVCRQE+ Q
Sbjct: 184 SHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSGHSYQS 243
Query: 309 ---------RLGNDXXXXXXXXXXXXXXXXXXXXSDSNHRETVERSSVSDRHDNQNAEYS 157
G + S SNH ET SS + +N YS
Sbjct: 244 SSSRSRNSNYSGRENSREGRRNPLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYS 303
Query: 156 YWPF 145
WPF
Sbjct: 304 GWPF 307
>ref|XP_006380961.1| hypothetical protein POPTR_0006s03070g [Populus trichocarpa]
gi|550335344|gb|ERP58758.1| hypothetical protein
POPTR_0006s03070g [Populus trichocarpa]
Length = 264
Score = 90.1 bits (222), Expect = 3e-16
Identities = 50/124 (40%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ---------- 310
S C VCK+ FELGS R++PC HLYHSDCIVPWL Q +SCPVCRQE+ Q
Sbjct: 140 SHCPVCKDKFELGSEARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGSNSGHSYQS 199
Query: 309 ---------RLGNDXXXXXXXXXXXXXXXXXXXXSDSNHRETVERSSVSDRHDNQNAEYS 157
G + S SNH ET SS + +N YS
Sbjct: 200 SSSRSRNSNYSGRENSREGRRNPLSYLWPFRSSNSSSNHDETPGSSSPTMHENNHQMGYS 259
Query: 156 YWPF 145
WPF
Sbjct: 260 GWPF 263
>gb|ACU24187.1| unknown [Glycine max]
Length = 309
Score = 88.6 bits (218), Expect = 8e-16
Identities = 47/109 (43%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGNDXXXXX 280
S C VCK+ FELGS+ R++PC HLYHSDCIVPWL Q +SCPVCRQE+ Q L +
Sbjct: 184 SHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSS----- 238
Query: 279 XXXXXXXXXXXXXXXSDSNHRETVERSSVSDR--HDNQNAEYSYWPFEY 139
+N R R S S R H +N WPF +
Sbjct: 239 --------------NGGANGRSRSARVSSSGRESHGRRNPFSFLWPFRF 273
>ref|XP_004486987.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
Length = 328
Score = 88.2 bits (217), Expect = 1e-15
Identities = 35/45 (77%), Positives = 39/45 (86%)
Frame = -1
Query: 453 CAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEI 319
CAVCKE FELGS RK+PCKHLYHSDCI+PWL R+SCPVCR E+
Sbjct: 176 CAVCKEAFELGSEARKMPCKHLYHSDCILPWLSMRNSCPVCRHEL 220
>ref|XP_002465271.1| hypothetical protein SORBIDRAFT_01g035310 [Sorghum bicolor]
gi|241919125|gb|EER92269.1| hypothetical protein
SORBIDRAFT_01g035310 [Sorghum bicolor]
Length = 285
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ 310
S C VCKE FELGS R++PCKHLYHSDCIVPWLEQ +SCPVCR E+ Q
Sbjct: 185 SHCPVCKEKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPTQ 234
>gb|EOY08709.1| RING-H2 finger C1A, putative [Theobroma cacao]
Length = 312
Score = 87.8 bits (216), Expect = 1e-15
Identities = 44/105 (41%), Positives = 58/105 (55%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGNDXXXXX 280
S C VCK+ FELGS R++PC H+YHSDCI+PWLEQ +SCPVCRQE+ Q G+
Sbjct: 184 SHCPVCKDKFELGSEARQMPCNHIYHSDCIIPWLEQHNSCPVCRQELPPQGPGSS----- 238
Query: 279 XXXXXXXXXXXXXXXSDSNHRETVERSSVSDRHDNQNAEYSYWPF 145
++S+ RE+ E H +N +WPF
Sbjct: 239 RNYHSSGQSSSSSLGTNSSGRESRE------NHSRRNPFSYFWPF 277
>ref|XP_004291377.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Fragaria vesca subsp. vesca]
gi|470110209|ref|XP_004291378.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like isoform 2 [Fragaria
vesca subsp. vesca] gi|470110211|ref|XP_004291379.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 3 [Fragaria vesca subsp. vesca]
Length = 308
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/127 (37%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEI------------- 319
S C VC++ FELGS R++PCKH+YHSDCIVPWL Q +SCPVCRQE+
Sbjct: 182 SHCPVCQDKFELGSEARQMPCKHVYHSDCIVPWLVQHNSCPVCRQELHQQGSESGRSSNS 241
Query: 318 --------SGQRLGNDXXXXXXXXXXXXXXXXXXXXSDSNHRETVERSSVSDRHDNQNAE 163
SG+ G + S SN E S + R ++
Sbjct: 242 RSRSSGNTSGRESGRESQGRRNPFASLWPFRASSSSSSSNRNPPHESSPPTARENSNQMG 301
Query: 162 YSYWPFE 142
YS WPF+
Sbjct: 302 YSGWPFD 308
>ref|XP_003556948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform 1
[Glycine max] gi|356577674|ref|XP_003556949.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
isoform 2 [Glycine max]
Length = 309
Score = 87.4 bits (215), Expect = 2e-15
Identities = 47/107 (43%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGNDXXXXX 280
S C VCK+ FELGS+ R++PC HLYHSDCIVPWL Q +SCPVCRQE+ Q L +
Sbjct: 184 SHCPVCKDKFELGSKARQMPCNHLYHSDCIVPWLVQHNSCPVCRQELPPQGLSSS----- 238
Query: 279 XXXXXXXXXXXXXXXSDSNHRETVERSSVSDR--HDNQNAEYSYWPF 145
+N R R S S R H +N WPF
Sbjct: 239 --------------NGGANGRSRSARVSSSGRESHGRRNPFSFLWPF 271
>ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
Length = 314
Score = 87.4 bits (215), Expect = 2e-15
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQR 307
+TCAVCKE FELG R++PCKHLYHSDCI+PWL R+SCPVCR E+ ++
Sbjct: 151 TTCAVCKEAFELGELAREMPCKHLYHSDCILPWLSMRNSCPVCRHELPSEQ 201
>ref|XP_006650082.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1 [Oryza
brachyantha] gi|573925058|ref|XP_006650083.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like isoform X2 [Oryza
brachyantha]
Length = 282
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ 310
S C VCK+ FELGS R++PCKHLYHSDCIVPWLEQ +SCPVCR E+ Q
Sbjct: 185 SHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQ 234
>ref|NP_001050120.1| Os03g0351800 [Oryza sativa Japonica Group]
gi|108708145|gb|ABF95940.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113548591|dbj|BAF12034.1| Os03g0351800 [Oryza sativa
Japonica Group] gi|125586254|gb|EAZ26918.1| hypothetical
protein OsJ_10846 [Oryza sativa Japonica Group]
gi|215697791|dbj|BAG91984.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 283
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/50 (72%), Positives = 41/50 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ 310
S C VCK+ FELGS R++PCKHLYHSDCIVPWLEQ +SCPVCR E+ Q
Sbjct: 185 SHCPVCKDKFELGSEAREMPCKHLYHSDCIVPWLEQHNSCPVCRYELPPQ 234
>ref|XP_006435652.1| hypothetical protein CICLE_v10031679mg [Citrus clementina]
gi|557537848|gb|ESR48892.1| hypothetical protein
CICLE_v10031679mg [Citrus clementina]
Length = 401
Score = 86.7 bits (213), Expect = 3e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGN 298
S CAVCKE FELGS R++PCKH+YHSDCI+PWL R+SCPVCR E+ N
Sbjct: 212 SHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNNSN 265
>ref|XP_006435651.1| hypothetical protein CICLE_v10031679mg [Citrus clementina]
gi|568866074|ref|XP_006486389.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Citrus sinensis]
gi|557537847|gb|ESR48891.1| hypothetical protein
CICLE_v10031679mg [Citrus clementina]
Length = 411
Score = 86.7 bits (213), Expect = 3e-15
Identities = 35/54 (64%), Positives = 41/54 (75%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGN 298
S CAVCKE FELGS R++PCKH+YHSDCI+PWL R+SCPVCR E+ N
Sbjct: 212 SHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLSLRNSCPVCRHELPADNNSN 265
>ref|XP_004143127.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
gi|449527992|ref|XP_004170991.1| PREDICTED: E3
ubiquitin-protein ligase RING1-like [Cucumis sativus]
Length = 378
Score = 86.7 bits (213), Expect = 3e-15
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRL 304
S CAVCKE FE+G+ R++PCKH+YHS+CI+PWL R+SCPVCR E+ +R+
Sbjct: 183 SHCAVCKEAFEIGTEAREMPCKHIYHSECIIPWLSMRNSCPVCRHELPSERV 234
>gb|EXC30728.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 322
Score = 86.3 bits (212), Expect = 4e-15
Identities = 34/54 (62%), Positives = 42/54 (77%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQRLGN 298
S C VCK+ FELGS R++PC H+YHSDCI+PWL Q +SCPVCRQE+ Q L +
Sbjct: 182 SHCPVCKDKFELGSEARQMPCNHIYHSDCIIPWLSQHNSCPVCRQELPAQGLSS 235
>ref|XP_006346709.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like isoform X1
[Solanum tuberosum]
Length = 394
Score = 86.3 bits (212), Expect = 4e-15
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = -1
Query: 459 STCAVCKEIFELGSRVRKLPCKHLYHSDCIVPWLEQRSSCPVCRQEISGQ 310
S CAVCKE FELG+ R++PCKHLYHSDCI+PWL R+SCPVCR E+ +
Sbjct: 192 SCCAVCKEAFELGTEAREMPCKHLYHSDCILPWLSLRNSCPVCRHELPSE 241