BLASTX nr result
ID: Rehmannia23_contig00012893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00012893
(607 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354416.1| PREDICTED: uncharacterized protein LOC102594... 107 3e-21
ref|XP_004303935.1| PREDICTED: uncharacterized protein LOC101303... 106 4e-21
ref|XP_004239250.1| PREDICTED: uncharacterized protein LOC101257... 105 1e-20
gb|EPS66560.1| hypothetical protein M569_08215, partial [Genlise... 104 2e-20
ref|XP_006297023.1| hypothetical protein CARUB_v10013016mg [Caps... 104 2e-20
ref|XP_004251557.1| PREDICTED: protein PAT1 homolog 1-like [Sola... 103 4e-20
ref|XP_006351984.1| PREDICTED: protein PAT1 homolog 1-like [Sola... 102 1e-19
gb|EMJ18254.1| hypothetical protein PRUPE_ppa001180mg [Prunus pe... 101 1e-19
ref|NP_188866.1| Topoisomerase II-associated protein PAT1 [Arabi... 101 2e-19
dbj|BAF00849.1| hypothetical protein [Arabidopsis thaliana] 101 2e-19
ref|XP_002883351.1| hypothetical protein ARALYDRAFT_479740 [Arab... 100 2e-19
ref|XP_006406189.1| hypothetical protein EUTSA_v10020108mg [Eutr... 98 2e-18
ref|XP_002308825.2| hypothetical protein POPTR_0006s02270g [Popu... 96 1e-17
gb|EXC35007.1| hypothetical protein L484_017708 [Morus notabilis] 95 2e-17
ref|XP_006481341.1| PREDICTED: uncharacterized protein LOC102618... 94 3e-17
ref|XP_006481340.1| PREDICTED: uncharacterized protein LOC102618... 94 3e-17
ref|XP_006373646.1| hypothetical protein POPTR_0016s02130g [Popu... 94 3e-17
gb|EOX93162.1| Topoisomerase II-associated protein PAT1, putativ... 93 6e-17
ref|XP_006414611.1| hypothetical protein EUTSA_v10024461mg [Eutr... 92 8e-17
ref|NP_567452.2| Topoisomerase II-associated protein PAT1 [Arabi... 92 8e-17
>ref|XP_006354416.1| PREDICTED: uncharacterized protein LOC102594467 isoform X1 [Solanum
tuberosum] gi|565375828|ref|XP_006354417.1| PREDICTED:
uncharacterized protein LOC102594467 isoform X2 [Solanum
tuberosum]
Length = 821
Score = 107 bits (266), Expect = 3e-21
Identities = 55/106 (51%), Positives = 65/106 (61%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGSL 468
LFDASQY FFG IA + G+DE+ EYHLF+KDEGS +GSL
Sbjct: 24 LFDASQYAFFGLDIAEEVELGGLEDGQDNSDLAVGGGLGDDEIQEYHLFEKDEGSAVGSL 83
Query: 469 SDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SDIDDLATTF+K+N+ V+GPRHPGVIGD A EWA+
Sbjct: 84 SDIDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRESSSAAEWAK 129
>ref|XP_004303935.1| PREDICTED: uncharacterized protein LOC101303919 [Fragaria vesca
subsp. vesca]
Length = 806
Score = 106 bits (265), Expect = 4e-21
Identities = 56/106 (52%), Positives = 65/106 (61%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGSL 468
LFDASQY FFG+ +A + G N EYHLF+KDEG GLGSL
Sbjct: 25 LFDASQYEFFGQNVAEEVELGGLDDENDRKSLFGSVDN------EYHLFEKDEGLGLGSL 78
Query: 469 SDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SD+DDLATTFAK+NKVV+GPRHPGVIGD AT+WA+
Sbjct: 79 SDVDDLATTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWAQ 124
>ref|XP_004239250.1| PREDICTED: uncharacterized protein LOC101257075 [Solanum
lycopersicum]
Length = 820
Score = 105 bits (261), Expect = 1e-20
Identities = 54/106 (50%), Positives = 66/106 (62%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGSL 468
LFDASQY FFG+ IA + G+DE+ EYHLF+KDEGS +GSL
Sbjct: 24 LFDASQYAFFGRDIAEEVELGGLEDGQDNSDLGVGGGLGDDEIQEYHLFEKDEGSVVGSL 83
Query: 469 SDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SDIDDLATTF+K+N+ V+GPRHPGVIGD A +WA+
Sbjct: 84 SDIDDLATTFSKLNRNVTGPRHPGVIGDRGSGSFSRESSSAADWAK 129
>gb|EPS66560.1| hypothetical protein M569_08215, partial [Genlisea aurea]
Length = 772
Score = 104 bits (259), Expect = 2e-20
Identities = 55/107 (51%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 289 LFDASQYTFFGKG-IAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGS 465
LFDAS+Y FFGKG + + G +G+DE N+Y LF +DEG G+ S
Sbjct: 4 LFDASRYDFFGKGFVDGLELGGLEEEDKGAASLTGTIVDGDDEFNDYRLFQRDEGLGMDS 63
Query: 466 LSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SDIDDLATTFAKIN+ VSGPRHPGVIGD AT+WAR
Sbjct: 64 SSDIDDLATTFAKINRDVSGPRHPGVIGDRASGSFSRESSSATDWAR 110
>ref|XP_006297023.1| hypothetical protein CARUB_v10013016mg [Capsella rubella]
gi|565478768|ref|XP_006297024.1| hypothetical protein
CARUB_v10013016mg [Capsella rubella]
gi|482565732|gb|EOA29921.1| hypothetical protein
CARUB_v10013016mg [Capsella rubella]
gi|482565733|gb|EOA29922.1| hypothetical protein
CARUB_v10013016mg [Capsella rubella]
Length = 784
Score = 104 bits (259), Expect = 2e-20
Identities = 61/128 (47%), Positives = 71/128 (55%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F+ LFDASQY FFG+ + PV+G
Sbjct: 1 MERSDSRDLYNFVRASSLDKNST-LFDASQYEFFGQNLDEMEIGGGLDDDGVIAPVLG-- 57
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+DE YHLFDK EG+GLGSLSD+DDLATTFAKIN+VV GP+HPGVIGD
Sbjct: 58 LTDDDE---YHLFDKGEGAGLGSLSDMDDLATTFAKINRVVPGPKHPGVIGDRGSGSFSR 114
Query: 577 XXXXATEW 600
ATEW
Sbjct: 115 ESSSATEW 122
>ref|XP_004251557.1| PREDICTED: protein PAT1 homolog 1-like [Solanum lycopersicum]
Length = 817
Score = 103 bits (257), Expect = 4e-20
Identities = 53/106 (50%), Positives = 64/106 (60%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGSL 468
LFDASQY FFG+ I D G+ + +EYHLF+KDEGS LGSL
Sbjct: 24 LFDASQYAFFGRDIGEEVELGGLEEEGNNCVPAVDGGFGDVDTHEYHLFEKDEGSALGSL 83
Query: 469 SDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SDIDDLATTF+K+N+ V+GPRHPG+IGD A EWA+
Sbjct: 84 SDIDDLATTFSKLNRNVAGPRHPGIIGDRGSGSFSRESSLAAEWAK 129
>ref|XP_006351984.1| PREDICTED: protein PAT1 homolog 1-like [Solanum tuberosum]
Length = 816
Score = 102 bits (253), Expect = 1e-19
Identities = 54/107 (50%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXX-PVIGDRFNGEDELNEYHLFDKDEGSGLGS 465
LFDASQY FFG+ PV+ F D+ +EYHLF+KDEGS LGS
Sbjct: 24 LFDASQYAFFGRDSGEEVELGGLEEEGNNCVPVVDGGFG--DDTHEYHLFEKDEGSALGS 81
Query: 466 LSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
LSDIDDLATTF+K+N+ V+GPRHPG+IGD A EWA+
Sbjct: 82 LSDIDDLATTFSKLNRNVAGPRHPGIIGDRGSGSFSRESSSAAEWAK 128
>gb|EMJ18254.1| hypothetical protein PRUPE_ppa001180mg [Prunus persica]
Length = 886
Score = 101 bits (252), Expect = 1e-19
Identities = 54/106 (50%), Positives = 63/106 (59%)
Frame = +1
Query: 289 LFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDRFNGEDELNEYHLFDKDEGSGLGSL 468
LFDASQY FFG+ P+ G N EYHLF+KDEG GLGSL
Sbjct: 102 LFDASQYEFFGQKSVEEVELGGLEDEEDRKPLFGPVDN------EYHLFEKDEGLGLGSL 155
Query: 469 SDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXXXXXXATEWAR 606
SD+DDLA+TFAK+NKVV+GPRHPGVIGD A +WA+
Sbjct: 156 SDVDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSAADWAQ 201
>ref|NP_188866.1| Topoisomerase II-associated protein PAT1 [Arabidopsis thaliana]
gi|332643095|gb|AEE76616.1| Topoisomerase II-associated
protein PAT1 [Arabidopsis thaliana]
Length = 782
Score = 101 bits (251), Expect = 2e-19
Identities = 59/130 (45%), Positives = 75/130 (57%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F+ LFDASQY FFG+ + PV+G
Sbjct: 1 MERSDSRDLYNFVRASSLDKNST-LFDASQYEFFGQNL-DDMELGGLDDDGVIAPVLG-- 56
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+ +D+ EYHLFDK EG+GLGSLSD+DDLATTFAK+N+VV+GP+HPGVIGD
Sbjct: 57 -HADDD--EYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSR 113
Query: 577 XXXXATEWAR 606
AT+W +
Sbjct: 114 ESSSATDWTQ 123
>dbj|BAF00849.1| hypothetical protein [Arabidopsis thaliana]
Length = 782
Score = 101 bits (251), Expect = 2e-19
Identities = 59/130 (45%), Positives = 75/130 (57%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F+ LFDASQY FFG+ + PV+G
Sbjct: 1 MERSDSRDLYNFVRASSLDKNST-LFDASQYEFFGQNL-DDMELGGLDDDGVIAPVLG-- 56
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+ +D+ EYHLFDK EG+GLGSLSD+DDLATTFAK+N+VV+GP+HPGVIGD
Sbjct: 57 -HADDD--EYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSR 113
Query: 577 XXXXATEWAR 606
AT+W +
Sbjct: 114 ESSSATDWTQ 123
>ref|XP_002883351.1| hypothetical protein ARALYDRAFT_479740 [Arabidopsis lyrata subsp.
lyrata] gi|297329191|gb|EFH59610.1| hypothetical protein
ARALYDRAFT_479740 [Arabidopsis lyrata subsp. lyrata]
Length = 782
Score = 100 bits (250), Expect = 2e-19
Identities = 59/128 (46%), Positives = 74/128 (57%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F+ LFDASQY FFG+ + PV+G
Sbjct: 1 MERSDSRDLYNFVRASSLDKNST-LFDASQYEFFGQNL-DDMEIGGLDDDGVIAPVLG-- 56
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+ +D+ EYHLFDK EG+GLGSLSD+DDLATTFAK+N+VV+GP+HPGVIGD
Sbjct: 57 -HADDD--EYHLFDKGEGAGLGSLSDMDDLATTFAKLNRVVTGPKHPGVIGDRGSGSFSR 113
Query: 577 XXXXATEW 600
AT+W
Sbjct: 114 ESSSATDW 121
>ref|XP_006406189.1| hypothetical protein EUTSA_v10020108mg [Eutrema salsugineum]
gi|557107335|gb|ESQ47642.1| hypothetical protein
EUTSA_v10020108mg [Eutrema salsugineum]
Length = 784
Score = 97.8 bits (242), Expect = 2e-18
Identities = 56/112 (50%), Positives = 70/112 (62%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F+ LFDASQY FFG+ + PV+G
Sbjct: 1 MERSDSRDLYNFV--RASSDQNSSLFDASQYEFFGQNL-DEMSLGGIDDDEMIAPVLG-- 55
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGD 552
+ +D+ EYHLFDK EG+GLGSLSD+DDLATTFAK+N+VV+GP+HPGVIGD
Sbjct: 56 -HADDD--EYHLFDKGEGAGLGSLSDLDDLATTFAKLNRVVTGPKHPGVIGD 104
>ref|XP_002308825.2| hypothetical protein POPTR_0006s02270g [Populus trichocarpa]
gi|550335288|gb|EEE92348.2| hypothetical protein
POPTR_0006s02270g [Populus trichocarpa]
Length = 789
Score = 95.5 bits (236), Expect = 1e-17
Identities = 58/130 (44%), Positives = 70/130 (53%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SDGK F F D LFDAS+Y FFG+ GD
Sbjct: 1 MERSDGKDFKEFTDSSSGA-----LFDASRYEFFGQHAVEEVELGGLEDE-------GDN 48
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+EY LFD+DEG LGSLS+IDDLA+TFAK+N+VV+GPR+PGVIGD
Sbjct: 49 LVLGPADDEYRLFDRDEGVSLGSLSEIDDLASTFAKLNRVVTGPRNPGVIGDRGSGSFSR 108
Query: 577 XXXXATEWAR 606
AT+WA+
Sbjct: 109 ESSSATDWAQ 118
>gb|EXC35007.1| hypothetical protein L484_017708 [Morus notabilis]
Length = 812
Score = 94.7 bits (234), Expect = 2e-17
Identities = 55/137 (40%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXL-------FDASQYTFFGKGIAXXXXXXXXXXXXXX 375
ME SDGK F F++ L FDAS+Y FFG+
Sbjct: 1 MERSDGKDFRDFVENSSSKPHLGDLSRSHNALFDASRYEFFGQNAGDEVELGGLEEEEDD 60
Query: 376 XPVIGDRFNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDX 555
+ G EYHLF+++E +G GSLSDIDDLA+TFAK+NKVV+GPRHPGVIGD
Sbjct: 61 KTLFGSVDT------EYHLFEREESAGFGSLSDIDDLASTFAKLNKVVTGPRHPGVIGDR 114
Query: 556 XXXXXXXXXXXATEWAR 606
A +W +
Sbjct: 115 GSGSFSRESSSAADWVQ 131
>ref|XP_006481341.1| PREDICTED: uncharacterized protein LOC102618153 isoform X2 [Citrus
sinensis]
Length = 768
Score = 94.0 bits (232), Expect = 3e-17
Identities = 59/131 (45%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXX-PVIGD 393
ME S GK F F +FDASQY FFG+ + PV G
Sbjct: 1 MERSRGKDFLNFT----RTSSGSAMFDASQYEFFGQNVGEEVELGGLEDEGDNNAPVFGS 56
Query: 394 RFNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXX 573
+ +EYHLFDK EG GLGSLSD+DDL TTFAK+N+VV+GPR+PGVIGD
Sbjct: 57 VTD-----DEYHLFDKGEGLGLGSLSDVDDLTTTFAKLNRVVTGPRNPGVIGD-RSGSFS 110
Query: 574 XXXXXATEWAR 606
AT+WA+
Sbjct: 111 RESSTATDWAQ 121
>ref|XP_006481340.1| PREDICTED: uncharacterized protein LOC102618153 isoform X1 [Citrus
sinensis]
Length = 793
Score = 94.0 bits (232), Expect = 3e-17
Identities = 59/131 (45%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXX-PVIGD 393
ME S GK F F +FDASQY FFG+ + PV G
Sbjct: 1 MERSRGKDFLNFT----RTSSGSAMFDASQYEFFGQNVGEEVELGGLEDEGDNNAPVFGS 56
Query: 394 RFNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXX 573
+ +EYHLFDK EG GLGSLSD+DDL TTFAK+N+VV+GPR+PGVIGD
Sbjct: 57 VTD-----DEYHLFDKGEGLGLGSLSDVDDLTTTFAKLNRVVTGPRNPGVIGD-RSGSFS 110
Query: 574 XXXXXATEWAR 606
AT+WA+
Sbjct: 111 RESSTATDWAQ 121
>ref|XP_006373646.1| hypothetical protein POPTR_0016s02130g [Populus trichocarpa]
gi|550320624|gb|ERP51443.1| hypothetical protein
POPTR_0016s02130g [Populus trichocarpa]
Length = 788
Score = 94.0 bits (232), Expect = 3e-17
Identities = 60/135 (44%), Positives = 73/135 (54%), Gaps = 5/135 (3%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SDGK F F + LFDASQY FFG+ G
Sbjct: 1 MERSDGKDFKEFTESSSGA-----LFDASQYEFFGQHAVEEVELG------------GLE 43
Query: 397 FNGEDEL-----NEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXX 561
GE+ L +EY LFD+DEG LGSLS+IDDLA+TFAK+N+VV+GPR+PGVIGD
Sbjct: 44 DEGENLLLGPTNDEYRLFDRDEGVCLGSLSEIDDLASTFAKLNRVVTGPRNPGVIGDRGS 103
Query: 562 XXXXXXXXXATEWAR 606
AT+WA+
Sbjct: 104 GSFSRESSSATDWAQ 118
>gb|EOX93162.1| Topoisomerase II-associated protein PAT1, putative isoform 1
[Theobroma cacao]
Length = 798
Score = 92.8 bits (229), Expect = 6e-17
Identities = 55/112 (49%), Positives = 66/112 (58%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
M+ SDGK N F LFDASQY FFG+ PV
Sbjct: 1 MDRSDGKLPNNFSQTSSGNA----LFDASQYEFFGQNAMEEVELGGLDDGEQDAPVFA-- 54
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGD 552
+ ED+ EYHLFD+ E GLGSLSD+DDLA+TFAK+N+VV+GPR+PGVIGD
Sbjct: 55 -SAEDD--EYHLFDRGEVVGLGSLSDMDDLASTFAKLNRVVTGPRNPGVIGD 103
>ref|XP_006414611.1| hypothetical protein EUTSA_v10024461mg [Eutrema salsugineum]
gi|567221966|ref|XP_006414612.1| hypothetical protein
EUTSA_v10024461mg [Eutrema salsugineum]
gi|557115781|gb|ESQ56064.1| hypothetical protein
EUTSA_v10024461mg [Eutrema salsugineum]
gi|557115782|gb|ESQ56065.1| hypothetical protein
EUTSA_v10024461mg [Eutrema salsugineum]
Length = 784
Score = 92.4 bits (228), Expect = 8e-17
Identities = 55/130 (42%), Positives = 70/130 (53%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + LFDASQY FFG+ + ++G
Sbjct: 1 MERSDSRDLYSLARASSDNINNSTLFDASQYEFFGQSLEEVELGGLDDDAA----LLG-- 54
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+ +DE EYHLFDK EG+ LGSLSD+DDLATTFAK+N+VV+GP+HPGVIG
Sbjct: 55 -HADDE--EYHLFDKREGAALGSLSDMDDLATTFAKLNRVVTGPKHPGVIGVRGSGSFSR 111
Query: 577 XXXXATEWAR 606
AT+W +
Sbjct: 112 ESSTATDWTQ 121
>ref|NP_567452.2| Topoisomerase II-associated protein PAT1 [Arabidopsis thaliana]
gi|14334732|gb|AAK59544.1| unknown protein [Arabidopsis
thaliana] gi|332658134|gb|AEE83534.1| Topoisomerase
II-associated protein PAT1 [Arabidopsis thaliana]
Length = 787
Score = 92.4 bits (228), Expect = 8e-17
Identities = 57/130 (43%), Positives = 69/130 (53%)
Frame = +1
Query: 217 MEGSDGKYFNGFIDPXXXXXXXXXLFDASQYTFFGKGIAXXXXXXXXXXXXXXXPVIGDR 396
ME SD + F F LFDASQY FFG+ + V
Sbjct: 1 MERSDSRDFYNFAKTSSDNNSA--LFDASQYEFFGQSLEEVELGGLDDDGTVRGHV---- 54
Query: 397 FNGEDELNEYHLFDKDEGSGLGSLSDIDDLATTFAKINKVVSGPRHPGVIGDXXXXXXXX 576
+DE EYHLFDK EG+GLGSLSD+DDLATTFAK+N+ V+GP+H GVIGD
Sbjct: 55 ---DDE--EYHLFDKREGAGLGSLSDMDDLATTFAKLNRNVTGPKHLGVIGDRGSGSFSR 109
Query: 577 XXXXATEWAR 606
AT+W +
Sbjct: 110 ESSTATDWTQ 119