BLASTX nr result

ID: Rehmannia23_contig00012876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00012876
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis t...    66   6e-09
ref|XP_002867687.1| long-chain-fatty-acid--CoA ligase [Arabidops...    65   1e-08
gb|ACC91252.1| long-chain-fatty-acid-CoA ligase [Arabidopsis hal...    65   1e-08
ref|XP_002509957.1| acyl CoA synthetase, putative [Ricinus commu...    64   3e-08
gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]     64   3e-08
gb|ABC02880.1| ACS1 [Ricinus communis]                                 64   3e-08
ref|XP_006644526.1| PREDICTED: long chain acyl-CoA synthetase 4-...    63   4e-08
ref|XP_003610999.1| Annotation was added to scaffolds in Novembe...    63   4e-08
ref|XP_003610998.1| Annotation was added to scaffolds in Novembe...    63   4e-08
ref|XP_003610997.1| Annotation was added to scaffolds in Novembe...    63   4e-08
ref|XP_004298900.1| PREDICTED: long chain acyl-CoA synthetase 4-...    63   5e-08
ref|XP_006850521.1| hypothetical protein AMTR_s00159p00012160 [A...    62   6e-08
dbj|BAJ88757.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   6e-08
ref|XP_002304555.1| acyl-coA synthetase family protein [Populus ...    62   6e-08
gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]       62   6e-08
ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-...    62   8e-08
gb|ABA00144.1| ACS-like protein [Gossypium hirsutum]                   62   8e-08
ref|XP_006590492.1| PREDICTED: long chain acyl-CoA synthetase 4-...    62   1e-07
ref|XP_006590491.1| PREDICTED: long chain acyl-CoA synthetase 4-...    62   1e-07
ref|XP_006590488.1| PREDICTED: long chain acyl-CoA synthetase 4-...    62   1e-07

>ref|NP_194116.1| long chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
           gi|75213733|sp|Q9T0A0.1|LACS4_ARATH RecName: Full=Long
           chain acyl-CoA synthetase 4
           gi|20805869|gb|AAM28871.1|AF503754_1 long chain acyl-CoA
           synthetase 4 [Arabidopsis thaliana]
           gi|4972089|emb|CAB43885.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|7269234|emb|CAB81303.1| acyl-CoA synthetase-like
           protein [Arabidopsis thaliana]
           gi|15146196|gb|AAK83581.1| AT4g23850/T32A16_20
           [Arabidopsis thaliana] gi|332659412|gb|AEE84812.1| long
           chain acyl-CoA synthetase 4 [Arabidopsis thaliana]
          Length = 666

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDL+TPTFKKKRPQLLKYYQSVID+MYK  +AK A+
Sbjct: 627 MERDLLTPTFKKKRPQLLKYYQSVIDEMYKTINAKFAS 664


>ref|XP_002867687.1| long-chain-fatty-acid--CoA ligase [Arabidopsis lyrata subsp.
           lyrata] gi|297313523|gb|EFH43946.1|
           long-chain-fatty-acid--CoA ligase [Arabidopsis lyrata
           subsp. lyrata]
          Length = 666

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDL+TPTFKKKRPQLLKYYQSVID+MYK  + K A+
Sbjct: 627 MERDLLTPTFKKKRPQLLKYYQSVIDEMYKTTNEKLAS 664


>gb|ACC91252.1| long-chain-fatty-acid-CoA ligase [Arabidopsis halleri]
          Length = 666

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDL+TPTFKKKRPQLLKYYQSVID+MYK  + K A+
Sbjct: 627 MERDLLTPTFKKKRPQLLKYYQSVIDEMYKTTNEKLAS 664


>ref|XP_002509957.1| acyl CoA synthetase, putative [Ricinus communis]
           gi|223549856|gb|EEF51344.1| acyl CoA synthetase,
           putative [Ricinus communis]
          Length = 565

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKS 200
           +ERDL+TPT+KKKRPQLLKYYQ VIDDMYKN S
Sbjct: 529 IERDLLTPTYKKKRPQLLKYYQKVIDDMYKNAS 561


>gb|ACB30545.1| long-chain acyl-CoA synthetase 4 [Ricinus communis]
          Length = 665

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKS 200
           +ERDL+TPT+KKKRPQLLKYYQ VIDDMYKN S
Sbjct: 629 IERDLLTPTYKKKRPQLLKYYQKVIDDMYKNAS 661


>gb|ABC02880.1| ACS1 [Ricinus communis]
          Length = 656

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKS 200
           +ERDL+TPT+KKKRPQLLKYYQ VIDDMYKN S
Sbjct: 620 IERDLLTPTYKKKRPQLLKYYQKVIDDMYKNAS 652


>ref|XP_006644526.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Oryza
           brachyantha]
          Length = 581

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           M+RDLITPT+KKKRPQLLKYYQSVID+MYKN
Sbjct: 549 MDRDLITPTYKKKRPQLLKYYQSVIDNMYKN 579


>ref|XP_003610999.1| Annotation was added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula] gi|355512334|gb|AES93957.1| Annotation was
           added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula]
          Length = 435

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYYQ+VIDDMYK+
Sbjct: 399 MERDLITPTYKKKRPQLLKYYQNVIDDMYKS 429


>ref|XP_003610998.1| Annotation was added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula] gi|355512333|gb|AES93956.1| Annotation was
           added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula]
          Length = 662

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYYQ+VIDDMYK+
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQNVIDDMYKS 656


>ref|XP_003610997.1| Annotation was added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula] gi|355512332|gb|AES93955.1| Annotation was
           added to scaffolds in November
           2011~Long-chain-fatty-acid-CoA ligase [Medicago
           truncatula]
          Length = 662

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYYQ+VIDDMYK+
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQNVIDDMYKS 656


>ref|XP_004298900.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Fragaria vesca
           subsp. vesca]
          Length = 666

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/31 (90%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYY+SVIDDMYK+
Sbjct: 628 MERDLITPTYKKKRPQLLKYYKSVIDDMYKS 658


>ref|XP_006850521.1| hypothetical protein AMTR_s00159p00012160 [Amborella trichopoda]
           gi|548854172|gb|ERN12102.1| hypothetical protein
           AMTR_s00159p00012160 [Amborella trichopoda]
          Length = 659

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDL+TPT+KKKRPQLLKYYQ VID+MYKN
Sbjct: 627 MERDLLTPTYKKKRPQLLKYYQGVIDEMYKN 657


>dbj|BAJ88757.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 667

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/31 (87%), Positives = 30/31 (96%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYYQ +IDDMYK+
Sbjct: 635 MERDLITPTYKKKRPQLLKYYQGIIDDMYKS 665


>ref|XP_002304555.1| acyl-coA synthetase family protein [Populus trichocarpa]
           gi|222841987|gb|EEE79534.1| acyl-coA synthetase family
           protein [Populus trichocarpa]
          Length = 662

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKS 200
           MERDLITPT+KKKRPQLLKYYQ+VID+MYK+ S
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQNVIDNMYKSAS 658


>gb|ABK96686.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 662

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKS 200
           MERDLITPT+KKKRPQLLKYYQ+VID+MYK+ S
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQNVIDNMYKSAS 658


>ref|XP_004149746.1| PREDICTED: long chain acyl-CoA synthetase 4-like [Cucumis sativus]
           gi|449505070|ref|XP_004162367.1| PREDICTED: long chain
           acyl-CoA synthetase 4-like [Cucumis sativus]
          Length = 660

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDLITPT+KKKRPQLLKYYQSVID MY N
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQSVIDSMYNN 656


>gb|ABA00144.1| ACS-like protein [Gossypium hirsutum]
          Length = 662

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/31 (87%), Positives = 31/31 (100%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKN 206
           MERDL+TPT+KKKRPQLLKYYQSVID+MYK+
Sbjct: 626 MERDLLTPTYKKKRPQLLKYYQSVIDEMYKS 656


>ref|XP_006590492.1| PREDICTED: long chain acyl-CoA synthetase 4-like isoform X5
           [Glycine max]
          Length = 542

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDLITPT+KKKRPQLLKYYQ+ ID+MYK+  +K +A
Sbjct: 505 MERDLITPTYKKKRPQLLKYYQNAIDNMYKSGGSKPSA 542


>ref|XP_006590491.1| PREDICTED: long chain acyl-CoA synthetase 4-like isoform X4
           [Glycine max]
          Length = 575

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDLITPT+KKKRPQLLKYYQ+ ID+MYK+  +K +A
Sbjct: 538 MERDLITPTYKKKRPQLLKYYQNAIDNMYKSGGSKPSA 575


>ref|XP_006590488.1| PREDICTED: long chain acyl-CoA synthetase 4-like isoform X1
           [Glycine max]
          Length = 663

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/38 (73%), Positives = 34/38 (89%)
 Frame = -3

Query: 298 MERDLITPTFKKKRPQLLKYYQSVIDDMYKNKSAK*AA 185
           MERDLITPT+KKKRPQLLKYYQ+ ID+MYK+  +K +A
Sbjct: 626 MERDLITPTYKKKRPQLLKYYQNAIDNMYKSGGSKPSA 663


Top