BLASTX nr result

ID: Rehmannia23_contig00012845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00012845
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS72838.1| hypothetical protein M569_01918, partial [Genlise...    69   6e-10
gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2...    68   1e-09
gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1...    68   1e-09
ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23...    67   2e-09
ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [S...    65   1e-08
ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [C...    60   2e-07
ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23...    58   1e-06
ref|XP_004164899.1| PREDICTED: putative DNA repair protein RAD23...    58   1e-06
ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23...    58   1e-06
ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like is...    56   4e-06
ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like is...    56   4e-06
ref|XP_004486595.1| PREDICTED: putative DNA repair protein RAD23...    56   4e-06
ref|XP_003543713.1| PREDICTED: ubiquitin receptor RAD23b-like is...    55   1e-05

>gb|EPS72838.1| hypothetical protein M569_01918, partial [Genlisea aurea]
          Length = 328

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 44/103 (42%), Positives = 53/103 (51%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTLAENKVSEDGFLVVM                                   + QP
Sbjct: 53  LKDESTLAENKVSEDGFLVVMLSKSKSIGSTGSSTSQPTPSPAQPSNPTAAD----ENQP 108

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
               PK + S   A +A++P++ Y + ASNLVAGNNLE T+QQ
Sbjct: 109 SASVPKISVSAEPAATANEPLSSYSEAASNLVAGNNLESTVQQ 151


>gb|EOY27441.1| Rad23 UV excision repair protein family isoform 2, partial
           [Theobroma cacao]
          Length = 303

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/103 (40%), Positives = 49/103 (47%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TLA+NKVSEDGFLVVM                                   +   
Sbjct: 53  LKDETTLADNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSTPSVTPPASNPAPAPEAPA 112

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P  K T S S+  +A+   + Y   ASNLVAGNNLEQTIQQ
Sbjct: 113 QAPTSKGTTSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQ 155


>gb|EOY27440.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
          Length = 373

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/103 (40%), Positives = 49/103 (47%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TLA+NKVSEDGFLVVM                                   +   
Sbjct: 53  LKDETTLADNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSTPSVTPPASNPAPAPEAPA 112

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P  K T S S+  +A+   + Y   ASNLVAGNNLEQTIQQ
Sbjct: 113 QAPTSKGTTSASDTATANPNTDTYSQAASNLVAGNNLEQTIQQ 155


>ref|XP_004235877.1| PREDICTED: putative DNA repair protein RAD23-1-like [Solanum
           lycopersicum]
          Length = 366

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/103 (44%), Positives = 50/103 (48%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTL EN VSEDGFLVVM                                   +V P
Sbjct: 53  LKDESTLLENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAANPTTTP-------EVIP 105

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
               PK   S S+A +AS P + Y   ASNLVAGNNLEQTIQQ
Sbjct: 106 PSQAPKDVVSASDAAAASLPADDYSQAASNLVAGNNLEQTIQQ 148


>ref|XP_006341431.1| PREDICTED: ubiquitin receptor RAD23b-like [Solanum tuberosum]
          Length = 367

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 45/103 (43%), Positives = 50/103 (48%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTL EN VSEDGFLVVM                                   +V P
Sbjct: 53  LKDESTLLENNVSEDGFLVVMLSKSKTASSSGTTSAQQPATAANPTTTP-------EVIP 105

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
               PK   S S+A +AS P + Y   ASNLVAGN+LEQTIQQ
Sbjct: 106 PSQVPKDVVSASDAAAASLPADDYSQAASNLVAGNSLEQTIQQ 148


>ref|XP_006493449.1| PREDICTED: ubiquitin receptor RAD23b-like [Citrus sinensis]
          Length = 377

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 44/107 (41%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSD--V 136
           LKDE+TLA+NKVSEDGFLVVM                                   +  V
Sbjct: 53  LKDETTLADNKVSEDGFLVVMLSKSKTLGSAGASSAQPAHTTPPTTAPSSNSTPPQEASV 112

Query: 135 QPLVPDPKSTES--TSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
            P  P P    S  TSN  +A+   + Y   ASNLVAGN+LEQTIQQ
Sbjct: 113 PPPAPTPSIPASNVTSNVTAANANSDTYGQAASNLVAGNDLEQTIQQ 159


>ref|XP_004137651.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
           sativus]
          Length = 358

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/107 (41%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTLAENKVSE+GFLVVM                                  S  QP
Sbjct: 53  LKDESTLAENKVSEEGFLVVM----------------------LSKSKTSVSAGQSSTQP 90

Query: 129 LVPDPKSTESTSNAPSA----SDPVNPYVDPASNLVAGNNLEQTIQQ 1
               P +    S+ P+A    S   + Y   ASNLVAGNNLEQT+QQ
Sbjct: 91  AQNPPVAQPVLSSTPAAQVTPSVQTDTYGQAASNLVAGNNLEQTVQQ 137


>ref|XP_004164899.1| PREDICTED: putative DNA repair protein RAD23-1-like, partial
           [Cucumis sativus]
          Length = 386

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/103 (35%), Positives = 48/103 (46%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TL ENK++EDGFLVVM                                      P
Sbjct: 65  LKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPE--AP 122

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P      + S+ P+A+  ++ Y   ASNLV+GNNLEQTIQ+
Sbjct: 123 AQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQE 165


>ref|XP_004147454.1| PREDICTED: putative DNA repair protein RAD23-1-like [Cucumis
           sativus]
          Length = 374

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 37/103 (35%), Positives = 48/103 (46%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TL ENK++EDGFLVVM                                      P
Sbjct: 53  LKDETTLTENKITEDGFLVVMLSKSKAPGSTGSSSTQTTTIVPTTTPTPNSTSIPE--AP 110

Query: 129 LVPDPKSTESTSNAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P      + S+ P+A+  ++ Y   ASNLV+GNNLEQTIQ+
Sbjct: 111 AQPAASRNVAISDVPTANAQIDTYGQAASNLVSGNNLEQTIQE 153


>ref|XP_006646969.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X2 [Oryza
           brachyantha]
          Length = 369

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTL ENKVSED FLVVM                                   D   
Sbjct: 53  LKDESTLEENKVSEDNFLVVM------LSKSKASGSSGALTALASSTPSTRQAPPPDAPQ 106

Query: 129 LVPDPKSTESTS---NAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P P +  ST+     P A DP N Y   ASNL++G+NL+ TI Q
Sbjct: 107 QAPQPLAAPSTTPQLERPPADDPSNAYGQAASNLLSGSNLDTTINQ 152


>ref|XP_006646968.1| PREDICTED: ubiquitin receptor RAD23b-like isoform X1 [Oryza
           brachyantha]
          Length = 370

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDESTL ENKVSED FLVVM                                   D   
Sbjct: 53  LKDESTLEENKVSEDNFLVVM------LSKSKASGSSGALTALASSTPSTRQAPPPDAPQ 106

Query: 129 LVPDPKSTESTS---NAPSASDPVNPYVDPASNLVAGNNLEQTIQQ 1
             P P +  ST+     P A DP N Y   ASNL++G+NL+ TI Q
Sbjct: 107 QAPQPLAAPSTTPQLERPPADDPSNAYGQAASNLLSGSNLDTTINQ 152


>ref|XP_004486595.1| PREDICTED: putative DNA repair protein RAD23-1-like isoform X1
           [Cicer arietinum]
          Length = 373

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 45/112 (40%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TLAENKVSEDGFLVVM                                   D  P
Sbjct: 53  LKDETTLAENKVSEDGFLVVM-------LSKSKALGSAGTSSTQTASNPPITVSTPDSTP 105

Query: 129 LVPDPKSTE---STSNAPSASD------PVNPYVDPASNLVAGNNLEQTIQQ 1
           +V   +S     S +N  SA+D        + Y   ASNLVAG+NLEQTIQQ
Sbjct: 106 VVQTHRSANNNASANNNASAADVTTTNVTTDNYGQAASNLVAGSNLEQTIQQ 157


>ref|XP_003543713.1| PREDICTED: ubiquitin receptor RAD23b-like isoform 1 [Glycine max]
          Length = 367

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 45/114 (39%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
 Frame = -1

Query: 309 LKDESTLAENKVSEDGFLVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDVQP 130
           LKDE+TL++NKVSEDGFLVVM                                  S+   
Sbjct: 53  LKDETTLSDNKVSEDGFLVVM----------------LSKGKTLGSAGISSTQFASNPPT 96

Query: 129 LVPDPKST-----ESTSNAPSASD------PVNPYVDPASNLVAGNNLEQTIQQ 1
            V  P ST     +S +N  SA+D        N Y   ASNLVAG+NLEQTIQQ
Sbjct: 97  TVSTPNSTPLVQPQSANNNASATDVTTTNVTTNTYGQAASNLVAGSNLEQTIQQ 150


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