BLASTX nr result
ID: Rehmannia23_contig00012800
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00012800
(997 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 252 1e-64
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 247 4e-63
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 247 4e-63
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 245 2e-62
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 235 2e-59
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida] 234 5e-59
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 233 7e-59
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob... 232 2e-58
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 227 5e-57
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus... 226 1e-56
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 220 6e-55
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 220 6e-55
dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsi... 220 6e-55
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-... 216 1e-53
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-... 216 1e-53
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 216 1e-53
ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Popu... 214 4e-53
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab... 212 2e-52
ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutr... 212 2e-52
ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch... 211 3e-52
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 252 bits (644), Expect = 1e-64
Identities = 136/244 (55%), Positives = 166/244 (68%), Gaps = 7/244 (2%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHI+ +CTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYP+I D+
Sbjct: 886 EASHIIHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDV 945
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNV-------EQEMDTVNHDDVTYLYKLVPGVSER 659
+NEFPGSVGAYHVSY+ + ++D + ++ T++H+DVTYLYKLVPGVSER
Sbjct: 946 KNEFPGSVGAYHVSYMMSQRAMDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSER 1005
Query: 658 SFGFKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLP 479
SFGFKVAQLAQLPSSCIRRA MAA LE + R KN + + +++ +
Sbjct: 1006 SFGFKVAQLAQLPSSCIRRANVMAAELEAMIVSRVKNSSAQK------TLQGSQQSISIQ 1059
Query: 478 LNCLQTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLNSESV*R 299
C + E + E A R+ F L AL N D + LKHA+S+A +L+ S
Sbjct: 1060 SGCSRA---EQIGLEEDACREFFLDLKSALGNADPERSLQFLKHARSIAKELIGSIGFLE 1116
Query: 298 TWHL 287
T HL
Sbjct: 1117 TLHL 1120
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 247 bits (631), Expect = 4e-63
Identities = 129/228 (56%), Positives = 166/228 (72%), Gaps = 2/228 (0%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS+IL++CT++SLVI+DELGRGTSTHDGVAIAYATL YLLEHK+CMVLFVTHYP+IADI
Sbjct: 865 EASYILRNCTAQSLVIVDELGRGTSTHDGVAIAYATLDYLLEHKKCMVLFVTHYPKIADI 924
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
+ +F GSVG YHVSYLT HK V MD+ + DVTYLYK+VPGVSE SFGFKVA
Sbjct: 925 KTKFTGSVGTYHVSYLTSHK-------VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVA 977
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPLNCLQ 464
QLAQLP SCI RA +AA+LE EV R +N+ + + D+ ++A+++ +
Sbjct: 978 QLAQLPPSCISRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFY 1037
Query: 463 TAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
+E E++ +YRDLF L A H+++ AK F LKHA+S+A +L+
Sbjct: 1038 LGRVEASEDLISSYRDLFLNLKFATHDDNPAKSFQFLKHARSIAKELI 1085
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum tuberosum]
Length = 1117
Score = 247 bits (631), Expect = 4e-63
Identities = 127/232 (54%), Positives = 166/232 (71%), Gaps = 5/232 (2%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS IL+ C++ SLVI+DELGRGTSTHDGVAIAYATL YLLEHK+CMVLFVTHYPEI I
Sbjct: 887 EASDILKKCSANSLVILDELGRGTSTHDGVAIAYATLQYLLEHKKCMVLFVTHYPEIVSI 946
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
N+FPGSVG YHVSYLT ++ N DF ++MD +N +D+TYLYKL PGVS RSFGFKVA
Sbjct: 947 TNKFPGSVGPYHVSYLTSQRDVNWDFKSNEKMDHINSEDITYLYKLAPGVSGRSFGFKVA 1006
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPLNCLQ 464
QLAQLP +CI+RA+ +AA+LE VC + ++ +CS+ D ++ + L + L
Sbjct: 1007 QLAQLPVACIQRAIEIAAKLEAAVCNYTEQQIRRSCSLSHRQDGCKNEPTEDVLESDSLS 1066
Query: 463 TAPIETLEEVEKAYRDLFFYLN---LALHNEDVAKRFNSLKHAKSLANKLLN 317
+E L+++ + YR+LF LN L H +D +R L A+SLA +L++
Sbjct: 1067 AGRVEGLDDISELYRELFLNLNFGFLEEHGDD--RRLQFLMQARSLAAQLIS 1116
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 245 bits (625), Expect = 2e-62
Identities = 125/230 (54%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS IL+ C++ SLVI+DELGRGTSTHDGVAIAYATL YLLEHK+CMVLFVTHYPEI I
Sbjct: 887 EASDILRKCSANSLVILDELGRGTSTHDGVAIAYATLQYLLEHKKCMVLFVTHYPEIVSI 946
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
+N+FPGSVG YHVSYLT ++ N DF ++MD +N +D+TYLYKL PGVS RSFGFKVA
Sbjct: 947 KNKFPGSVGPYHVSYLTSQRDVNGDFKSNEKMDHINGEDITYLYKLAPGVSGRSFGFKVA 1006
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPLNCLQ 464
QLAQLP +CI++A+ +AA+LE VC + + +CS+ D ++ + L + L
Sbjct: 1007 QLAQLPVTCIQQAIVIAAKLEAAVCNYTEQQFRRSCSLSHRQDGCKNEPTEDVLESDSLS 1066
Query: 463 TAPIETLEEVEKAYRDLFFYLNLA-LHNEDVAKRFNSLKHAKSLANKLLN 317
+E L+++ + YR+LF LN A L +R L A+SLA +L++
Sbjct: 1067 AGIVEGLDDISELYRELFMNLNYAYLEEHGNDRRLQFLMQARSLAAQLIS 1116
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 235 bits (600), Expect = 2e-59
Identities = 130/232 (56%), Positives = 161/232 (69%), Gaps = 5/232 (2%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHIL +CTSRSLVIIDELGRGTSTHDGVAIAYATLH+LL+ KRCMVLFVTHYP+IA I
Sbjct: 879 EASHILHNCTSRSLVIIDELGRGTSTHDGVAIAYATLHHLLQQKRCMVLFVTHYPKIASI 938
Query: 817 RNEFPGSVGAYHVSYLTPHKET-NLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKV 641
R EFPGSVGAYHVSYLT ++ +D E E DVTYLYKLVPGVSERSFGFKV
Sbjct: 939 RTEFPGSVGAYHVSYLTSDRDRGTVDMTSENE-------DVTYLYKLVPGVSERSFGFKV 991
Query: 640 AQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKL---SMNCSMPIDKSEDAEKDAYLPLNC 470
A+LAQLPSSCIRRA MA RLE V +R+ ++ S+ S +D+ E+ E++
Sbjct: 992 AELAQLPSSCIRRATFMADRLEAVVRRRESDRYGNKSLLRSPTMDQKEEVEEEMLGTTGN 1051
Query: 469 LQTAPIETLEEV-EKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLN 317
+ E++ Y F L A+ ++D+ + L HA+S+A +L++
Sbjct: 1052 AYAGENQIKEDIYGSEYNKFFLNLKTAISSDDLTENIRYLNHARSIAQELVS 1103
>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 846
Score = 234 bits (596), Expect = 5e-59
Identities = 124/233 (53%), Positives = 158/233 (67%), Gaps = 6/233 (2%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS IL+ C++ SLVI+DELGRGTSTHDGVAIA+ATL YLLEHK+CMVLFVTHYPEI +
Sbjct: 614 EASDILKKCSASSLVILDELGRGTSTHDGVAIAFATLQYLLEHKKCMVLFVTHYPEIVSV 673
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
+NEFPGSVG YHVSYLT + D ++M+ +N +D+TYLYKL PGV+ERSFGFKVA
Sbjct: 674 KNEFPGSVGPYHVSYLTSQGDVTGDCRSNEKMNYINSEDITYLYKLAPGVAERSFGFKVA 733
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVC-----KRDKNKLSMNCSMPIDKSEDAEKDAYLPLN 473
QLAQLP +CI+RA+ +A RLE VC R + S+N KS + D P
Sbjct: 734 QLAQLPVACIQRAIVIAGRLEAAVCNYTEQSRIRRSYSINYRQDGCKSSEPVDDVLEPY- 792
Query: 472 CLQTAPIETLEEVEKAYRDLFFYLNLALHNEDVA-KRFNSLKHAKSLANKLLN 317
+ ++ + YR+LF +N AL E+ +RF L AKSLA +L++
Sbjct: 793 LSSAGSVNCIDNSSELYRELFLNINFALLEENGGDRRFQFLMQAKSLAAQLIS 845
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 233 bits (595), Expect = 7e-59
Identities = 134/236 (56%), Positives = 164/236 (69%), Gaps = 9/236 (3%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHIL +CT+RSLVIIDELGRGTSTHDGVAIAYATLH LL+ K+CMVLFVTHYP+IA I
Sbjct: 870 EASHILHNCTARSLVIIDELGRGTSTHDGVAIAYATLHNLLQQKKCMVLFVTHYPKIAYI 929
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTV----NHDDVTYLYKLVPGVSERSFG 650
R EFPGSV AYHVSYLT ++ +MDTV ++DVTYLYKLVPGVSERSFG
Sbjct: 930 RTEFPGSVEAYHVSYLTSNR----------DMDTVGMQSENEDVTYLYKLVPGVSERSFG 979
Query: 649 FKVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNC---SMPIDKSEDAEKDAYLP 479
FKVA+LAQLPSSCIR+A MAARLE V R +N+ N S+ D+ ++A+ +
Sbjct: 980 FKVAELAQLPSSCIRQATIMAARLEAVVNSRARNRHGKNWLLKSLVTDQKKEAQDEMLES 1039
Query: 478 LNCLQTAPIETLEEVE-KAYRDLFFYLNLALHN-EDVAKRFNSLKHAKSLANKLLN 317
CL+ LEE AY+ F L A+ + +D K L HA+S+A +L++
Sbjct: 1040 PECLREGWSPVLEETNGGAYQKFFINLKAAIIDVDDPVKSCQYLNHARSIARELIS 1095
>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 232 bits (591), Expect = 2e-58
Identities = 126/229 (55%), Positives = 159/229 (69%), Gaps = 2/229 (0%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS IL +CT+RSLV+IDELGRGTSTHDGV+IAYATLH+LLE ++CMVLFVTHYP IADI
Sbjct: 893 EASQILHNCTARSLVVIDELGRGTSTHDGVSIAYATLHHLLEQRKCMVLFVTHYPRIADI 952
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
+ EFPGSV YHVSYLT H N E MD + +VTYLYKLVPGVS RSFGFKVA
Sbjct: 953 KVEFPGSVEVYHVSYLTAH-------NDEVTMDAKSDHEVTYLYKLVPGVSARSFGFKVA 1005
Query: 637 QLAQLPSSCIRRAVAMAARLE-VEVCK-RDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQ 464
QLAQLPSSCI +A+ MA RLE +E + R K++ + D+ + +++ +
Sbjct: 1006 QLAQLPSSCISQAIIMATRLEAIESSRVRKKSEERQPETSSSDQELETQENILKSIGSFS 1065
Query: 463 TAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLN 317
+ +E LEE A+ DL L A ++D+ K F LK A+S+A +L+N
Sbjct: 1066 SERLENLEEFASAFSDLLLNLKSARTDDDLGKSFQLLKEARSIAKELIN 1114
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 227 bits (579), Expect = 5e-57
Identities = 129/231 (55%), Positives = 157/231 (67%), Gaps = 3/231 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E S+IL+ C RSLVIIDELGRGTSTHDGVAIAYATLH+LLE KRCMVLFVTHYP+IA+I
Sbjct: 867 ETSNILKSCKERSLVIIDELGRGTSTHDGVAIAYATLHHLLEQKRCMVLFVTHYPKIAEI 926
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHD---DVTYLYKLVPGVSERSFGF 647
EFPGSVGAYHVS+LT H+ +E T+N + DVTYLYKLVPGVSE+SFGF
Sbjct: 927 IAEFPGSVGAYHVSHLTSHR--------NEETGTMNSESDHDVTYLYKLVPGVSEKSFGF 978
Query: 646 KVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCL 467
KVA+LAQLPSSCI RAV MA+RLE+ V R NK ++ S +KD + L
Sbjct: 979 KVAELAQLPSSCINRAVTMASRLEMVVSNRSANKCGK--MHLLETSSLCQKDEKMTLEME 1036
Query: 466 QTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLNS 314
+ ++ Y++ F L AL +D AK L A+ LAN+L++S
Sbjct: 1037 SSKCLD-------GYKEFFLILKNALSVDDHAKSLQLLNQARGLANELISS 1080
>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
Length = 1075
Score = 226 bits (576), Expect = 1e-56
Identities = 122/231 (52%), Positives = 156/231 (67%), Gaps = 3/231 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E SHILQ CT SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ KR MVLFVTHYP+IA++
Sbjct: 863 ETSHILQCCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIANL 922
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
EFPGSV AYHVS+LTPH + ++++ DVTYLYKL PGVS+RSFGFKVA
Sbjct: 923 ATEFPGSVAAYHVSHLTPH---------DARKNSISDHDVTYLYKLAPGVSDRSFGFKVA 973
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNC---SMPIDKSEDAEKDAYLPLNCL 467
QLAQLPS CI RA+ MA++LE V R ++ ++ I + ++ C+
Sbjct: 974 QLAQLPSHCISRALVMASKLEALVNSRIHSRSGKELLLDTLVIGQEQE---------QCM 1024
Query: 466 QTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLNS 314
L+E AY+D + L A+ ++D AK F+ LKHA+S+A KL+ S
Sbjct: 1025 AQPHDRPLQEFGIAYKDFYLNLKAAIQDDDCAKSFHLLKHARSIAKKLIGS 1075
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 220 bits (561), Expect = 6e-55
Identities = 118/227 (51%), Positives = 155/227 (68%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E SHIL CT RSLVI+DELGRGTSTHDG+AIAYATLHYLL+ K+ +VLFVTHYP+IA +
Sbjct: 866 ETSHILHRCTGRSLVILDELGRGTSTHDGMAIAYATLHYLLKQKKSLVLFVTHYPKIACL 925
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
EFPGSV AYHVS+LT H + + + N NH+DVTYLYKLVPGVSERSFGFKVA
Sbjct: 926 ETEFPGSVAAYHVSHLTSHDDASKNSN--------NHEDVTYLYKLVPGVSERSFGFKVA 977
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQTA 458
QLAQLPS CI RA+ MA++LE V R + + ++ ++ P +C +
Sbjct: 978 QLAQLPSHCISRAIVMASKLEALVNNRIHGRSGKELLLDAPVIDEDQE----PHDCPR-- 1031
Query: 457 PIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLLN 317
+E +AY++ + L A+ ++D AK F L++A+S+A L++
Sbjct: 1032 -----QEFGRAYKEFYSNLKAAILDDDHAKSFQLLENARSIAKSLIS 1073
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 220 bits (561), Expect = 6e-55
Identities = 124/225 (55%), Positives = 149/225 (66%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHI++ C+SRSLVI+DELGRGTSTHDGVAIAYATL +LL KRC+VLFVTHYPEIA+I
Sbjct: 879 EASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEI 938
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
N FPGSVG YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVA
Sbjct: 939 SNGFPGSVGTYHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVA 988
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQTA 458
QLAQ+P SCIRRA++MAA+LE EV R++ N M + + + A
Sbjct: 989 QLAQIPPSCIRRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------- 1033
Query: 457 PIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKL 323
EE A DLF L AL ED K F LKHA +A K+
Sbjct: 1034 -----EESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKI 1073
>dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 386
Score = 220 bits (561), Expect = 6e-55
Identities = 124/225 (55%), Positives = 149/225 (66%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHI++ C+SRSLVI+DELGRGTSTHDGVAIAYATL +LL KRC+VLFVTHYPEIA+I
Sbjct: 184 EASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEI 243
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
N FPGSVG YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVA
Sbjct: 244 SNGFPGSVGTYHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVA 293
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQTA 458
QLAQ+P SCIRRA++MAA+LE EV R++ N M + + + A
Sbjct: 294 QLAQIPPSCIRRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------- 338
Query: 457 PIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKL 323
EE A DLF L AL ED K F LKHA +A K+
Sbjct: 339 -----EESISALGDLFADLKFALSEEDPWKAFEFLKHAWKIAGKI 378
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2 [Glycine
max]
Length = 991
Score = 216 bits (550), Expect = 1e-53
Identities = 123/229 (53%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E SHIL CT SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ KR MVLFVTHYP+IA +
Sbjct: 774 ETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASL 833
Query: 817 RNEFPGSVGAYHVSYLTPH---KETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGF 647
EFPGSV AYHVS+L H K +NLD DVTYLYKLVPGVSERSFGF
Sbjct: 834 ATEFPGSVAAYHVSHLISHDASKNSNLD------------HDVTYLYKLVPGVSERSFGF 881
Query: 646 KVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCL 467
KVAQLAQLPS CI RA+ MA++LE V R + + + +D ++ L L
Sbjct: 882 KVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRSTK--ELLLDTLVIGQEKEQLMAQSL 939
Query: 466 QTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
+E + AY+D + L A ++D AK F+ L+HA+S+A KL+
Sbjct: 940 D----RPHKEFDMAYKDFYLNLKAATEDDDWAKSFHLLEHARSIAKKLI 984
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Glycine
max]
Length = 1070
Score = 216 bits (550), Expect = 1e-53
Identities = 123/229 (53%), Positives = 150/229 (65%), Gaps = 3/229 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E SHIL CT SLVIIDELGRGTSTHDG+AIA+ATLHYLL+ KR MVLFVTHYP+IA +
Sbjct: 853 ETSHILNSCTEHSLVIIDELGRGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASL 912
Query: 817 RNEFPGSVGAYHVSYLTPH---KETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGF 647
EFPGSV AYHVS+L H K +NLD DVTYLYKLVPGVSERSFGF
Sbjct: 913 ATEFPGSVAAYHVSHLISHDASKNSNLD------------HDVTYLYKLVPGVSERSFGF 960
Query: 646 KVAQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCL 467
KVAQLAQLPS CI RA+ MA++LE V R + + + +D ++ L L
Sbjct: 961 KVAQLAQLPSHCISRAIVMASKLEALVNSRIHGRSTK--ELLLDTLVIGQEKEQLMAQSL 1018
Query: 466 QTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
+E + AY+D + L A ++D AK F+ L+HA+S+A KL+
Sbjct: 1019 D----RPHKEFDMAYKDFYLNLKAATEDDDWAKSFHLLEHARSIAKKLI 1063
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 216 bits (549), Expect = 1e-53
Identities = 124/229 (54%), Positives = 151/229 (65%), Gaps = 3/229 (1%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
E SHIL+ CT SLVIIDELGRGTSTHDG AIAYATL +LLE KRCMVLFVTHYP+IA+I
Sbjct: 877 ETSHILRKCTGYSLVIIDELGRGTSTHDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANI 936
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
R F SVGAYHVSYL K N + +++DVTYLYKLVPGVSERSFGFKVA
Sbjct: 937 RTGFLNSVGAYHVSYLMAEK------NNDATDSKFDNEDVTYLYKLVPGVSERSFGFKVA 990
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMN---CSMPIDKSEDAEKDAYLPLNCL 467
QLAQLP+SCI RA MAARLE + R +N+L + ++ ID+ ++ ++
Sbjct: 991 QLAQLPTSCIERATVMAARLEEAISCRIRNRLDKSQLLKALQIDQLQEIQEKIPESPGNF 1050
Query: 466 QTAPIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
IE EE+ Y F AL +D AK F L++A+S+A L+
Sbjct: 1051 HDKRIENYEELNNTYEKFFLNFKSALLGDD-AKSFQYLENARSIARALI 1098
>ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Populus trichocarpa]
gi|550322628|gb|EEF06592.2| hypothetical protein
POPTR_0015s13240g [Populus trichocarpa]
Length = 963
Score = 214 bits (545), Expect = 4e-53
Identities = 120/217 (55%), Positives = 155/217 (71%), Gaps = 1/217 (0%)
Frame = -1
Query: 967 SRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADIRNEFPGSVGA 788
++SLVIIDELGRGTST+DG AIAYATL++LL+ KRCMVLFVTHYP+I +I+ EFPGSVGA
Sbjct: 758 TQSLVIIDELGRGTSTYDGEAIAYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGA 817
Query: 787 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 608
YHVSYLT K +E DT +DVTYLYKLVPGVSE+SFGFKVAQLA+LP SCI
Sbjct: 818 YHVSYLTSEKSEGA---IESTCDT---EDVTYLYKLVPGVSEKSFGFKVAQLAELPPSCI 871
Query: 607 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQT-APIETLEEVE 431
RRA MAARLE + R N+ + ++P+ + E+A++ N L++ IE E+
Sbjct: 872 RRATIMAARLEAVLSSRLGNEQLLE-TLPVQQQEEAQE------NMLRSDVRIEKSEDST 924
Query: 430 KAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
AYR+ F L A+ ++DVA+ L+ A+S+A + L
Sbjct: 925 VAYREFFSNLKSAMFDDDVARSSQFLEKARSIAKEFL 961
>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
Length = 1078
Score = 212 bits (540), Expect = 2e-52
Identities = 125/226 (55%), Positives = 148/226 (65%), Gaps = 2/226 (0%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHI++ C+SRSLVI+DELGRGTSTHDGVAIAYATL +LL KRC+VLFVTHYPEIA+I
Sbjct: 877 EASHIIRTCSSRSLVILDELGRGTSTHDGVAIAYATLQHLLLEKRCLVLFVTHYPEIAEI 936
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
N F GSVG YHVSYLT K+ + +HDDVTYLYKLV G+ RSFGFKVA
Sbjct: 937 SNGFRGSVGTYHVSYLTSQKKKS----------GFDHDDVTYLYKLVRGLCSRSFGFKVA 986
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQTA 458
QLAQ+PSSCIRRA++M A+LE EV R++N + ++E E+ A
Sbjct: 987 QLAQIPSSCIRRAISMGAKLEAEVGARERN-------TRMGEAEGHEEHG---------A 1030
Query: 457 PIE--TLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANK 326
P + EE A DLF L AL ED K F L HA +A K
Sbjct: 1031 PGDWTGAEESISALGDLFADLKFALSEEDPWKAFEFLNHAWKIAAK 1076
>ref|XP_006413297.1| hypothetical protein EUTSA_v10024274mg [Eutrema salsugineum]
gi|557114467|gb|ESQ54750.1| hypothetical protein
EUTSA_v10024274mg [Eutrema salsugineum]
Length = 1088
Score = 212 bits (539), Expect = 2e-52
Identities = 119/224 (53%), Positives = 145/224 (64%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EASHI++ C+SRSLVIIDELGRGTSTHDGVAIAYATL +L+ KRC+VLFVTHYPEIA+I
Sbjct: 871 EASHIIRTCSSRSLVIIDELGRGTSTHDGVAIAYATLQHLIAEKRCLVLFVTHYPEIAEI 930
Query: 817 RNEFPGSVGAYHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVA 638
N FPGS G YHVSYLT K+ +HDDVTYLYKLV G+ RSFGFKVA
Sbjct: 931 SNRFPGSAGTYHVSYLTSQKDDG----------GCDHDDVTYLYKLVRGLCSRSFGFKVA 980
Query: 637 QLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQTA 458
QLAQ+P SCI RA++MA +LE EV R++ LS+ M A ++ + +A
Sbjct: 981 QLAQIPPSCIHRAISMAGKLEDEVRARERYTLSIKYLMESPGEPKAREEHAESRDSEDSA 1040
Query: 457 PIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANK 326
EE A D F L +AL ED ++ F L A +A +
Sbjct: 1041 ---NSEENMSALGDFFADLRVALSEEDPSRSFEFLNRAWKIAEE 1081
>ref|XP_004960023.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein MSH3-like
[Setaria italica]
Length = 1104
Score = 211 bits (538), Expect = 3e-52
Identities = 117/227 (51%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Frame = -1
Query: 997 EASHILQHCTSRSLVIIDELGRGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPEIADI 818
EAS+IL +C+SRSLVIIDELGRGTSTHDGVAIAYATLHYLL+ K+C+V+FVTHYP+I DI
Sbjct: 879 EASNILHNCSSRSLVIIDELGRGTSTHDGVAIAYATLHYLLKEKKCIVIFVTHYPKILDI 938
Query: 817 RNEFPGSVGAYHVSYLTPHKETNL-DFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKV 641
+ EF GSVGAYHVSYL K + D +E ++ + ++T+LYKLV G S+RSFG V
Sbjct: 939 QREFEGSVGAYHVSYLATRKLVEVTDKPLESSPESKDLGEITFLYKLVAGASDRSFGLNV 998
Query: 640 AQLAQLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPLNCLQT 461
A LAQLPS CI RA MAA+L+ E+ R++NKL + D ++ + L
Sbjct: 999 ALLAQLPSRCIERASIMAAKLQEELSMREENKLRRTMDA---ATVDGPSESSTEVGLLCA 1055
Query: 460 APIETLEEVEKAYRDLFFYLNLALHNEDVAKRFNSLKHAKSLANKLL 320
P + L E A R + + LA N DV SLKHA+ +A K +
Sbjct: 1056 QPYQALAE---ACRRVLLTMTLAQSNNDVTNSLCSLKHAREVAQKTI 1099