BLASTX nr result
ID: Rehmannia23_contig00012768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00012768
(708 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II tra... 148 1e-33
ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II tra... 126 8e-27
ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259... 100 5e-19
ref|XP_002529152.1| conserved hypothetical protein [Ricinus comm... 100 8e-19
ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843... 94 3e-17
gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus... 93 7e-17
gb|EOY02124.1| Phytochrome and flowering time regulatory protein... 92 2e-16
gb|EOY02123.1| Phytochrome and flowering time regulatory protein... 92 2e-16
ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II tra... 89 1e-15
ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II tra... 87 4e-15
ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II tra... 87 4e-15
gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlise... 83 8e-14
ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family prot... 83 8e-14
ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II tra... 82 1e-13
ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citr... 82 1e-13
ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II tra... 80 5e-13
ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II tra... 80 5e-13
ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II tra... 79 1e-12
gb|EXC06056.1| hypothetical protein L484_009967 [Morus notabilis] 78 3e-12
gb|AGM20684.1| PFT [Populus tomentosa] 75 2e-11
>ref|XP_006354095.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum tuberosum]
Length = 819
Score = 148 bits (374), Expect = 1e-33
Identities = 101/240 (42%), Positives = 119/240 (49%), Gaps = 5/240 (2%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGMXXXXXXXXXXXX 181
RPV AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS++ISSGM
Sbjct: 354 RPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLS 413
Query: 182 XG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSM-G 349
G +T++ G++P+ +++GNS+I +SQ L+N Q VSM G
Sbjct: 414 SGQSGVTTMTGAVPLAGSAQNTQNSAPSSFTSTAPSMSGNSNISISQPLNNNQRGVSMTG 473
Query: 350 QTLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 529
QT+P MSQG+L P
Sbjct: 474 QTVPGMSQGNL--PGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQ 531
Query: 530 XXXXXXXXTNMPLNXXXXXXXXXXXX-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 532 PVGVNSTSANMPLSQQQTSAALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 591
>ref|XP_004252687.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Solanum lycopersicum]
Length = 805
Score = 126 bits (316), Expect = 8e-27
Identities = 92/239 (38%), Positives = 110/239 (46%), Gaps = 4/239 (1%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGMXXXXXXXXXXXX 181
RPV AAANV+ILN VAQA Q L GGTSIGL SMGGTPMLS++ISSGM
Sbjct: 354 RPVAAAAANVKILNGVAQAHQVLGGGTSIGLQSMGGTPMLSSMISSGMASSVPASQAVLS 413
Query: 182 XG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSMGQ 352
G +T++ G++P+ N+ S ++ S+S GQ
Sbjct: 414 SGQSGVTTMTGAVPLA-------------------GSAQNTQNSAPSSFTSTAPSMS-GQ 453
Query: 353 TLPSMSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 532
T+P+MSQG+ +P
Sbjct: 454 TVPAMSQGN--IPGTQMMPSGTGMNQNMLTGLGATGLPSGTGTMMPTPGMSQQGQPGMQP 511
Query: 533 XXXXXXXTNMPLNXXXXXXXXXXXX-KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 512 VGVNSTSANMPLSQQQTSGALPSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 570
>ref|XP_002278845.1| PREDICTED: uncharacterized protein LOC100259509 [Vitis vinifera]
Length = 827
Score = 100 bits (249), Expect = 5e-19
Identities = 66/139 (47%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV AAANV ILN+++QARQ AL+GGTSIGL SMGGT M +SN+ISSGM
Sbjct: 357 RPVVPAAANVSILNNLSQARQVMHSAALSGGTSIGLQSMGGTSMAMHMSNMISSGMASSV 416
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ++SI GS + N++ NS++G+SQ LSNL
Sbjct: 417 PATQTVFSSGQSAVSSITGSGTLAGTAQVAQNSALGSFTSATSNMSVNSNLGISQPLSNL 476
Query: 329 QASVSMGQTLPSMSQGSLP 385
Q VSMGQT+P MSQG+LP
Sbjct: 477 QGGVSMGQTVPGMSQGNLP 495
Score = 73.6 bits (179), Expect = 6e-11
Identities = 37/50 (74%), Positives = 37/50 (74%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 552 NMPLPQQTSGAMQTAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 601
>ref|XP_002529152.1| conserved hypothetical protein [Ricinus communis]
gi|223531431|gb|EEF33265.1| conserved hypothetical
protein [Ricinus communis]
Length = 561
Score = 99.8 bits (247), Expect = 8e-19
Identities = 65/138 (47%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV AANV ILN+++QARQ AL GGTSIGLPS+ TP+ +SN+ISSGM
Sbjct: 315 RPVPPGAANVSILNNLSQARQVMNSAALTGGTSIGLPSINQTPVAMHMSNMISSGMASSV 374
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITSI GS + NV+GNS++GMSQ + NL
Sbjct: 375 PAAQTVFSSGQTGITSITGSGTLTGTTQIAPNSGLGSFTSTTTNVSGNSNLGMSQPMGNL 434
Query: 329 QASVSMGQTLPSMSQGSL 382
QA VSMGQ++P MSQG+L
Sbjct: 435 QAGVSMGQSVPGMSQGNL 452
Score = 73.2 bits (178), Expect = 8e-11
Identities = 36/50 (72%), Positives = 37/50 (74%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRS SAS
Sbjct: 510 NMPLSQQTASALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSGSAS 559
>ref|XP_003577974.1| PREDICTED: uncharacterized protein LOC100843505 [Brachypodium
distachyon]
Length = 771
Score = 94.4 bits (233), Expect = 3e-17
Identities = 71/234 (30%), Positives = 102/234 (43%), Gaps = 3/234 (1%)
Frame = +2
Query: 14 GAAANVRILNDVAQARQALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXXX 184
G ANV ILN+++Q R +L+G TS+G P+MG TP+ +SN+ISSGM
Sbjct: 358 GGPANVSILNNLSQHRHSLSGATSMG-PNMGATPIQVHMSNMISSGMTSTPSV------- 409
Query: 185 GITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSMGQTLPS 364
I+S++G++ V+GNS++ +S SL+N+Q +++ Q++P
Sbjct: 410 -ISSMSGTVQPTGAQQLVQNTALGSFGSNNSTVSGNSNVAVSSSLANIQNNIATAQSVPP 468
Query: 365 MSQGSLPVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 544
M+QG L
Sbjct: 469 MAQGGLMSGSHGSQSGQGGIGTNQNMISSLGPTAISSAPAMMPTPGMTQQAGVNSLSVNN 528
Query: 545 XXXTNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMP+ K +WEG LSGQRQGQPVFI +LEGYRS +AS
Sbjct: 529 SSAMNMPMPQQPNGQQQSKYVK---IWEGTLSGQRQGQPVFICKLEGYRSGTAS 579
>gb|ESW25347.1| hypothetical protein PHAVU_003G028300g [Phaseolus vulgaris]
Length = 863
Score = 93.2 bits (230), Expect = 7e-17
Identities = 62/141 (43%), Positives = 78/141 (55%), Gaps = 11/141 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV ANV ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISSGM
Sbjct: 359 RPVNPTQANVSILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 418
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITSI S P+ N++ +S+IG+SQ L NL
Sbjct: 419 PAAQNVFPSGQSGITSITSSGPLSVPAQVGQNPGLGSLTSNTSNLSSSSNIGISQPLGNL 478
Query: 329 QASVSMGQTLPSMSQGSLPVP 391
Q +VSMGQ MSQG+L P
Sbjct: 479 QGAVSMGQQASGMSQGNLSGP 499
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL+ KYVKVWEG+LSGQRQGQPVFIT+LEGYR++SAS
Sbjct: 552 NMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSAS 601
>gb|EOY02124.1| Phytochrome and flowering time regulatory protein isoform 2
[Theobroma cacao]
Length = 860
Score = 92.0 bits (227), Expect = 2e-16
Identities = 62/136 (45%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXX 160
RPV AANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 347 RPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVP 405
Query: 161 XXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQ 331
G +TS+ GS + NVT NS+IGMSQ + N+Q
Sbjct: 406 PAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQ 465
Query: 332 ASVSMGQTLPSMSQGS 379
+ VSMGQ++P MSQG+
Sbjct: 466 SGVSMGQSVPGMSQGN 481
Score = 72.8 bits (177), Expect = 1e-10
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 539 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 588
>gb|EOY02123.1| Phytochrome and flowering time regulatory protein isoform 1
[Theobroma cacao]
Length = 871
Score = 92.0 bits (227), Expect = 2e-16
Identities = 62/136 (45%), Positives = 78/136 (57%), Gaps = 10/136 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXX 160
RPV AANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 358 RPVP-PAANVNILNNLSQARVMNSAALTGGTSIGLPSMGQTPVAMHMSNMISSGMASSVP 416
Query: 161 XXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQ 331
G +TS+ GS + NVT NS+IGMSQ + N+Q
Sbjct: 417 PAQTVFSSGQSCMTSLTGSGALTGTVQVPPNSGLSSFASATSNVTANSNIGMSQPMGNVQ 476
Query: 332 ASVSMGQTLPSMSQGS 379
+ VSMGQ++P MSQG+
Sbjct: 477 SGVSMGQSVPGMSQGN 492
Score = 72.8 bits (177), Expect = 1e-10
Identities = 36/50 (72%), Positives = 38/50 (76%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
+MPL+ KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 550 SMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 599
>ref|XP_006574879.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Glycine max]
Length = 877
Score = 89.4 bits (220), Expect = 1e-15
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV ANV ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISSGM
Sbjct: 356 RPVNPVQANVNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSGMTSSV 415
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITS+ S P+ N++ +S+IG+SQ L NL
Sbjct: 416 PAAQNVFSSGQSGITSMTSSGPLTVPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475
Query: 329 QASVSMGQTLPSMSQGSL 382
Q VS+GQ + MSQG+L
Sbjct: 476 QGVVSIGQQVSGMSQGNL 493
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/50 (66%), Positives = 38/50 (76%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NMPL+ KYVKVWEG+LSGQRQGQPVFIT+LEGYR++SAS
Sbjct: 549 NMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSAS 598
>ref|XP_006573257.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X3 [Glycine max]
Length = 725
Score = 87.4 bits (215), Expect = 4e-15
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV A ANV ILN+++ ARQ AL+GGTS+GLPSM TP+ +SN+ISSGM
Sbjct: 249 RPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 308
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITS+ S P+ N++ +S+IG+SQ L NL
Sbjct: 309 PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 368
Query: 329 QASVSMGQTLPSMSQGSL 382
Q +VSMGQ + MSQG+L
Sbjct: 369 QGAVSMGQQVSGMSQGNL 386
Score = 71.2 bits (173), Expect = 3e-10
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +2
Query: 554 TNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
TNMPL+ KYVKVWEG+LSGQRQGQPVFIT+LEGYR++SAS
Sbjct: 441 TNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSAS 491
>ref|XP_006573255.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Glycine max]
gi|571434654|ref|XP_006573256.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X2 [Glycine max]
Length = 832
Score = 87.4 bits (215), Expect = 4e-15
Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV A ANV ILN+++ ARQ AL+GGTS+GLPSM TP+ +SN+ISSGM
Sbjct: 356 RPVNPAQANVNILNNLSIARQVMNSAALSGGTSMGLPSMSQTPVAMHMSNMISSGMTSSV 415
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITS+ S P+ N++ +S+IG+SQ L NL
Sbjct: 416 PAAQNVFSSGQSGITSMTSSGPLTGPAQVGQNSGLGSLTSNTSNLSSSSNIGISQPLGNL 475
Query: 329 QASVSMGQTLPSMSQGSL 382
Q +VSMGQ + MSQG+L
Sbjct: 476 QGAVSMGQQVSGMSQGNL 493
Score = 71.2 bits (173), Expect = 3e-10
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = +2
Query: 554 TNMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
TNMPL+ KYVKVWEG+LSGQRQGQPVFIT+LEGYR++SAS
Sbjct: 548 TNMPLSQQTSGGMQSAQSKYVKVWEGSLSGQRQGQPVFITKLEGYRNSSAS 598
>gb|EPS74095.1| hypothetical protein M569_00660, partial [Genlisea aurea]
Length = 527
Score = 83.2 bits (204), Expect = 8e-14
Identities = 60/135 (44%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPMLSNVISSGM-----XXXXXXX 166
RPVGGAAANVRILNDVAQ RQALA G SI GG PMLSN+IS+G+
Sbjct: 357 RPVGGAAANVRILNDVAQ-RQALAAGASI-----GGAPMLSNMISNGVTSSSAQNVAPSS 410
Query: 167 XXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSL--SNLQASV 340
S +LP+P V+G+SS G+SQ + +NLQ +
Sbjct: 411 GPSAAAASVSSGSTLPVPAAPF----------------VSGSSSHGISQPMNNNNLQGNG 454
Query: 341 SMGQTLPSMSQGSLP 385
++GQT+ SMSQG+LP
Sbjct: 455 NIGQTIQSMSQGNLP 469
>ref|XP_002315956.1| PHYTOCHROME AND FLOWERING TIME 1 family protein [Populus
trichocarpa] gi|222864996|gb|EEF02127.1| PHYTOCHROME AND
FLOWERING TIME 1 family protein [Populus trichocarpa]
Length = 796
Score = 83.2 bits (204), Expect = 8e-14
Identities = 57/139 (41%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQA-----LAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RP AAANV ILN+++QARQ L+GGTS+GLPS+ T + +SN+ISSGM
Sbjct: 349 RPGPPAAANVSILNNISQARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISSGMASSV 408
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIG-MSQSLSN 325
G ++SI GS + NV+GNS++G +SQ + N
Sbjct: 409 PAAPTVFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISQPMGN 468
Query: 326 LQASVSMGQTLPSMSQGSL 382
LQA VS+GQ+ P MSQG++
Sbjct: 469 LQAGVSIGQSAPGMSQGNI 487
Score = 70.5 bits (171), Expect = 5e-10
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 608 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS
Sbjct: 562 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 594
>ref|XP_006484420.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X2 [Citrus sinensis]
Length = 829
Score = 82.4 bits (202), Expect = 1e-13
Identities = 59/137 (43%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGM---X 148
RP+ AAANV ILN+++QARQ AL GGTSIGL SMG TPM +SN+ISSGM
Sbjct: 355 RPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSV 414
Query: 149 XXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
GITSI GS + N++GNS+ +SQ + L
Sbjct: 415 PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 474
Query: 329 QASVSMGQTLPSMSQGS 379
Q SMGQ++ MSQG+
Sbjct: 475 QGGASMGQSV-GMSQGN 490
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NM L+ KYVKVWEG+LSGQRQGQPVFIT+LEGYRSASAS
Sbjct: 549 NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSASAS 598
>ref|XP_006437725.1| hypothetical protein CICLE_v10030710mg [Citrus clementina]
gi|568861864|ref|XP_006484419.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 25-like isoform
X1 [Citrus sinensis] gi|557539921|gb|ESR50965.1|
hypothetical protein CICLE_v10030710mg [Citrus
clementina]
Length = 830
Score = 82.4 bits (202), Expect = 1e-13
Identities = 59/137 (43%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGM---X 148
RP+ AAANV ILN+++QARQ AL GGTSIGL SMG TPM +SN+ISSGM
Sbjct: 356 RPMAPAAANVNILNNLSQARQVMNNAALTGGTSIGLQSMGQTPMAMHMSNMISSGMASSV 415
Query: 149 XXXXXXXXXXXXGITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
GITSI GS + N++GNS+ +SQ + L
Sbjct: 416 PTSQPVFSSAQSGITSIGGSGTLTGTSQVPQNSGLNSFTSAPSNLSGNSNPSISQPMGTL 475
Query: 329 QASVSMGQTLPSMSQGS 379
Q SMGQ++ MSQG+
Sbjct: 476 QGGASMGQSV-GMSQGN 491
Score = 68.6 bits (166), Expect = 2e-09
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = +2
Query: 557 NMPLNXXXXXXXXXXXXKYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
NM L+ KYVKVWEG+LSGQRQGQPVFIT+LEGYRSASAS
Sbjct: 550 NMQLSQQTSSALHSSQSKYVKVWEGSLSGQRQGQPVFITKLEGYRSASAS 599
>ref|XP_004166861.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like, partial [Cucumis sativus]
Length = 595
Score = 80.5 bits (197), Expect = 5e-13
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Frame = +2
Query: 23 ANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXX 181
ANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 361 ANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPAAQNVFS 420
Query: 182 XG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSMGQ 352
G +TSI GS T N++GN +I SQ++ NLQ SVS+ Q
Sbjct: 421 SGQSGMTSINGS---STLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSVSQ 477
Query: 353 TLPSMSQGSL 382
++P +SQG+L
Sbjct: 478 SVPGISQGNL 487
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 608 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
KYVK WEGNLSGQRQGQPVFITR+EGYRSASAS
Sbjct: 562 KYVKFWEGNLSGQRQGQPVFITRMEGYRSASAS 594
>ref|XP_004135110.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like [Cucumis sativus]
Length = 858
Score = 80.5 bits (197), Expect = 5e-13
Identities = 56/130 (43%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Frame = +2
Query: 23 ANVRILNDVAQAR----QALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXXXXX 181
ANV ILN+++QAR AL GGTSIGLPSMG TP+ +SN+ISSGM
Sbjct: 361 ANVSILNNISQARVMSTAALNGGTSIGLPSMGQTPIAMHVSNMISSGMGSSVPAAQNVFS 420
Query: 182 XG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSMGQ 352
G +TSI GS T N++GN +I SQ++ NLQ SVS+ Q
Sbjct: 421 SGQSGMTSINGS---STLSQVAPNSGISSLTSGNNNISGNPNIATSQAVGNLQGSVSVSQ 477
Query: 353 TLPSMSQGSL 382
++P +SQG+L
Sbjct: 478 SVPGISQGNL 487
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/33 (93%), Positives = 32/33 (96%)
Frame = +2
Query: 608 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
KYVK WEGNLSGQRQGQPVFITR+EGYRSASAS
Sbjct: 562 KYVKFWEGNLSGQRQGQPVFITRMEGYRSASAS 594
>ref|XP_004513303.1| PREDICTED: mediator of RNA polymerase II transcription subunit
25-like isoform X1 [Cicer arietinum]
Length = 818
Score = 79.0 bits (193), Expect = 1e-12
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQ-----ALAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RPV A N ILN+++QARQ AL+GGTS+GLPSMG TP+ +SN+ISS
Sbjct: 358 RPVNPAQVNGNILNNLSQARQVMNSAALSGGTSMGLPSMGQTPVAMHMSNMISSATTSSG 417
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNL 328
G ITSI S + N++ +S+ G+SQSL+NL
Sbjct: 418 PTGQNVFSSGPPVITSITSSGSLTAPAQVAQNTGLASLTSATSNLSSSSNTGISQSLANL 477
Query: 329 QASVSMGQTLPSMSQGSL 382
Q +VSMGQ M+ G+L
Sbjct: 478 QGAVSMGQQASGMNPGNL 495
Score = 64.7 bits (156), Expect = 3e-08
Identities = 28/33 (84%), Positives = 33/33 (100%)
Frame = +2
Query: 608 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
KY++VWEG+LSGQRQGQPVFIT+LEGYRS+SAS
Sbjct: 564 KYIRVWEGSLSGQRQGQPVFITKLEGYRSSSAS 596
>gb|EXC06056.1| hypothetical protein L484_009967 [Morus notabilis]
Length = 607
Score = 77.8 bits (190), Expect = 3e-12
Identities = 55/132 (41%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQALAGGTSIGLPSMGGTPM---LSNVISSGMXXXXXXXXX 172
RPVG A ANV ILN+++ RQ + S LP MG TP+ +SN+ISSGM
Sbjct: 333 RPVGPAPANVNILNNLSAKRQVI---NSAALP-MGQTPIGMHMSNMISSGMASSTPAQNT 388
Query: 173 XXXX--GITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIGMSQSLSNLQASVSM 346
ITS+ GS P+ NV+GNS+IG+SQ ++NLQ VSM
Sbjct: 389 LPSGQPAITSLPGSGPLTQVTQTPGLSTFSAATS---NVSGNSNIGVSQPMNNLQGGVSM 445
Query: 347 GQTLPSMSQGSL 382
GQ++P+MSQG++
Sbjct: 446 GQSVPTMSQGNI 457
>gb|AGM20684.1| PFT [Populus tomentosa]
Length = 889
Score = 75.1 bits (183), Expect = 2e-11
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Frame = +2
Query: 2 RPVGGAAANVRILNDVAQARQA-----LAGGTSIGLPSMGGTPM---LSNVISSGMXXXX 157
RP AAANV ILN+++ ARQ L+GGTS+GLPS+ T + +SN+IS GM
Sbjct: 388 RPGPPAAANVSILNNISPARQVMNSAGLSGGTSLGLPSINQTSVAMHMSNMISCGMASSV 447
Query: 158 XXXXXXXXXG---ITSIAGSLPIPTXXXXXXXXXXXXXXXXXXNVTGNSSIG-MSQSLSN 325
G ++SI GS + NV+GNS++G +S + N
Sbjct: 448 PAAPTLFSSGQPGVSSITGSGTLTGTTQIGPNSGLGSFTSATSNVSGNSNLGRISHPMRN 507
Query: 326 LQASVSMGQTLPSMSQGSL 382
LQA VS+G++ P MSQG++
Sbjct: 508 LQAGVSIGRSAPGMSQGNI 526
Score = 63.2 bits (152), Expect = 8e-08
Identities = 29/33 (87%), Positives = 30/33 (90%)
Frame = +2
Query: 608 KYVKVWEGNLSGQRQGQPVFITRLEGYRSASAS 706
KYVK WEGNLSGQR+GQPVFITRL GYRS SAS
Sbjct: 601 KYVKAWEGNLSGQREGQPVFITRLGGYRSPSAS 633