BLASTX nr result
ID: Rehmannia23_contig00012461
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00012461
(1250 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Popu... 110 2e-21
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi... 109 3e-21
ref|XP_006581683.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 108 6e-21
ref|XP_006581682.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 108 6e-21
ref|XP_006581678.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 108 6e-21
ref|XP_006577814.1| PREDICTED: uncharacterized protein LOC100786... 108 6e-21
gb|ESW08439.1| hypothetical protein PHAVU_009G046000g [Phaseolus... 108 6e-21
ref|XP_006376671.1| pre-mRNA splicing factor family protein [Pop... 108 6e-21
ref|XP_006577812.1| PREDICTED: uncharacterized protein LOC100786... 108 6e-21
ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 108 6e-21
gb|ACU24484.1| unknown [Glycine max] 108 6e-21
ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin... 108 6e-21
ref|XP_002318458.1| predicted protein [Populus trichocarpa] 108 6e-21
ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 106 2e-20
ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citr... 106 2e-20
ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citr... 106 2e-20
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like... 106 2e-20
emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera] 106 2e-20
gb|EPS60498.1| hypothetical protein M569_14305, partial [Genlise... 106 2e-20
ref|XP_002519893.1| arginine/serine-rich splicing factor, putati... 106 2e-20
>ref|XP_006374084.1| hypothetical protein POPTR_0015s00690g [Populus trichocarpa]
gi|550321685|gb|ERP51881.1| hypothetical protein
POPTR_0015s00690g [Populus trichocarpa]
Length = 260
Score = 110 bits (274), Expect = 2e-21
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILD+ELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVE 51
>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi|355491412|gb|AES72615.1|
RNA-binding protein [Medicago truncatula]
Length = 380
Score = 109 bits (272), Expect = 3e-21
Identities = 58/104 (55%), Positives = 71/104 (68%), Gaps = 4/104 (3%)
Frame = +2
Query: 950 SSCHITQTVSENV*DYLSWNC*TA----SIWFPNDAVFSTCSIYY*LVP*GLRMSGRFSR 1117
+S + Q + +L W+ A S+W + A+F CS+ + MS RFSR
Sbjct: 57 ASASVLQRLGAQAVIFLLWSIFGANEQWSLW--STALFKDCSLGLTVQFLQSNMSSRFSR 114
Query: 1118 TIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
TIYVGNLPADIRESEIEDLFYKYGRI++IELK+PPRPPCYCFVE
Sbjct: 115 TIYVGNLPADIRESEIEDLFYKYGRIMEIELKVPPRPPCYCFVE 158
>ref|XP_006581683.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X7 [Glycine max]
Length = 262
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|XP_006581682.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X6 [Glycine max]
Length = 299
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|XP_006581678.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X2 [Glycine max]
gi|571460367|ref|XP_006581679.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform X3 [Glycine
max] gi|571460369|ref|XP_006581680.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform X4 [Glycine
max] gi|571460371|ref|XP_006581681.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform X5 [Glycine
max]
Length = 300
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|XP_006577814.1| PREDICTED: uncharacterized protein LOC100786491 isoform X3 [Glycine
max]
Length = 266
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>gb|ESW08439.1| hypothetical protein PHAVU_009G046000g [Phaseolus vulgaris]
gi|561009533|gb|ESW08440.1| hypothetical protein
PHAVU_009G046000g [Phaseolus vulgaris]
Length = 260
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGR++DIELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRVMDIELKIPPRPPCYCFVE 51
>ref|XP_006376671.1| pre-mRNA splicing factor family protein [Populus trichocarpa]
gi|550326255|gb|ERP54468.1| pre-mRNA splicing factor
family protein [Populus trichocarpa]
Length = 279
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLPADIRES++EDLFYKYGRILD+ELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVE 51
>ref|XP_006577812.1| PREDICTED: uncharacterized protein LOC100786491 isoform X1 [Glycine
max] gi|571448372|ref|XP_006577813.1| PREDICTED:
uncharacterized protein LOC100786491 isoform X2 [Glycine
max]
Length = 267
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|XP_003526756.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Glycine max]
Length = 263
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>gb|ACU24484.1| unknown [Glycine max]
Length = 267
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
gi|255636783|gb|ACU18725.1| unknown [Glycine max]
Length = 267
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRESEIEDLFYKYGRI+DIELK+PPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVE 51
>ref|XP_002318458.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 108 bits (269), Expect = 6e-21
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLPADIRES++EDLFYKYGRILD+ELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVE 51
>ref|XP_006493195.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform X1 [Citrus
sinensis] gi|568880594|ref|XP_006493196.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform X2 [Citrus
sinensis] gi|568880596|ref|XP_006493197.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform X3 [Citrus
sinensis]
Length = 277
Score = 106 bits (265), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILDIELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVE 51
>ref|XP_006441230.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
gi|557543492|gb|ESR54470.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
Length = 271
Score = 106 bits (265), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILDIELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVE 51
>ref|XP_006441229.1| hypothetical protein CICLE_v10021646mg [Citrus clementina]
gi|567897486|ref|XP_006441231.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|567897488|ref|XP_006441232.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|567897490|ref|XP_006441233.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|557543491|gb|ESR54469.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|557543493|gb|ESR54471.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|557543494|gb|ESR54472.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
gi|557543495|gb|ESR54473.1| hypothetical protein
CICLE_v10021646mg [Citrus clementina]
Length = 271
Score = 106 bits (265), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILDIELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEVEDLFYKYGRILDIELKIPPRPPCYCFVE 51
>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
product [Vitis vinifera]
Length = 250
Score = 106 bits (265), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE EIEDLFYKYGRILD+ELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVE 51
>emb|CAN71592.1| hypothetical protein VITISV_015931 [Vitis vinifera]
Length = 267
Score = 106 bits (265), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE EIEDLFYKYGRILD+ELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVE 51
>gb|EPS60498.1| hypothetical protein M569_14305, partial [Genlisea aurea]
Length = 231
Score = 106 bits (264), Expect = 2e-20
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MS RFSRTIYVGNLPADIRESEIEDLFYK+GRILDIELKIPPRPPCYCFVE
Sbjct: 1 MSDRFSRTIYVGNLPADIRESEIEDLFYKFGRILDIELKIPPRPPCYCFVE 51
>ref|XP_002519893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223540939|gb|EEF42497.1| arginine/serine-rich splicing
factor, putative [Ricinus communis]
Length = 264
Score = 106 bits (264), Expect = 2e-20
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = +2
Query: 1097 MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDIELKIPPRPPCYCFVE 1249
MSGRFSRTIYVGNLP+DIRE E+EDLFYKYGRILDIELKIPPRPPCYCFVE
Sbjct: 1 MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVE 51