BLASTX nr result

ID: Rehmannia23_contig00012237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00012237
         (361 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006346327.1| PREDICTED: uncharacterized protein LOC102592...    80   2e-13
ref|XP_004230712.1| PREDICTED: uncharacterized protein LOC101244...    71   2e-10
ref|XP_006369739.1| hypothetical protein POPTR_0001s30420g [Popu...    61   2e-07
emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]    57   3e-06
ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249...    55   1e-05

>ref|XP_006346327.1| PREDICTED: uncharacterized protein LOC102592559 isoform X1 [Solanum
           tuberosum] gi|565359035|ref|XP_006346328.1| PREDICTED:
           uncharacterized protein LOC102592559 isoform X2 [Solanum
           tuberosum]
          Length = 288

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
 Frame = -1

Query: 361 RFGRSSDPFGVGSDLGSPTPVDRA---NRRHRHHNSP--GGNHTRRDRLDPDGCDPLRRA 197
           R+GRS     +GSDL +          NRRH HHN    G N+TRRDRLD + C+PLRR+
Sbjct: 14  RYGRSD--LELGSDLSTSRISHNHSVHNRRHHHHNHQPTGNNNTRRDRLDVNDCEPLRRS 71

Query: 196 LHHTRQLPLPRPSHPPQERESTRLEDXXXXXXXXXXXXXXXHIN-VRDRLRVSGNDRLPG 20
            H  R+LPL        +R+S  L+                + N +RDR+ +SG++RLPG
Sbjct: 72  PHRLRRLPL--------DRDSVSLDSGNGQVASGDTNHATNNDNRIRDRVGISGSERLPG 123

Query: 19  AVLLAR 2
           AVLLAR
Sbjct: 124 AVLLAR 129


>ref|XP_004230712.1| PREDICTED: uncharacterized protein LOC101244425, partial [Solanum
           lycopersicum]
          Length = 278

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
 Frame = -1

Query: 361 RFGRSSDPFGVGSDLGSPTPVDR---ANRRHRHHN-SPGGNHTRRDRLDPDGCDPLRRAL 194
           R+GRS     +GSDL +          NRRH HH+  P GN+TRRDR+D + C+PLRR+ 
Sbjct: 16  RYGRSD--LELGSDLSTIRNSHNHSVRNRRHHHHSHQPTGNNTRRDRVDVNDCEPLRRSP 73

Query: 193 HHTRQLPLPRPSHPPQERESTRLEDXXXXXXXXXXXXXXXHIN-VRDRLRVSGNDRLPGA 17
            H       R    P +R+S  L+                + N +RDR+  SG++RLPG 
Sbjct: 74  PH-------RLRRWPPDRDSVSLDSANSQAASGDTNHATNNNNRIRDRVGTSGSERLPGT 126

Query: 16  VLLAR 2
           VLLAR
Sbjct: 127 VLLAR 131


>ref|XP_006369739.1| hypothetical protein POPTR_0001s30420g [Populus trichocarpa]
           gi|550348547|gb|ERP66308.1| hypothetical protein
           POPTR_0001s30420g [Populus trichocarpa]
          Length = 283

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 46/120 (38%), Positives = 52/120 (43%)
 Frame = -1

Query: 361 RFGRSSDPFGVGSDLGSPTPVDRANRRHRHHNSPGGNHTRRDRLDPDGCDPLRRALHHTR 182
           R  R+    G+   L   +     NRRH H      NH    R D DGCDPLRR  H   
Sbjct: 14  RVSRADSDLGLEPSLSDRSFYQNYNRRHHH------NHNHNHRHDLDGCDPLRRPPH--V 65

Query: 181 QLPLPRPSHPPQERESTRLEDXXXXXXXXXXXXXXXHINVRDRLRVSGNDRLPGAVLLAR 2
           + P  R S  P ER S RL+                      R RV+GN RLPGAVLLAR
Sbjct: 66  RTPCHRLS-SPSERASARLDQ----DTDQFVPSNNLTAETLSRPRVTGNGRLPGAVLLAR 120


>emb|CAN60716.1| hypothetical protein VITISV_034287 [Vitis vinifera]
          Length = 688

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 46/137 (33%), Positives = 56/137 (40%), Gaps = 17/137 (12%)
 Frame = -1

Query: 361 RFGRSSDPFGV-GSDLGSPTPVDRANRRHRHHNSPGGNHTRRDRLDPDGCDPLRRALHHT 185
           R GR++ P    G +L         + R RHH+          R DPDGCDPLRRA H  
Sbjct: 13  RLGRAAPPADFEGLELPDDXSFHYISNRRRHHH----------RHDPDGCDPLRRAQHFQ 62

Query: 184 RQLPLPRPSHPPQ--------------ERESTRLEDXXXXXXXXXXXXXXXHI--NVRDR 53
             LP   PS                  +RE  RL+                 I   +  R
Sbjct: 63  AHLPSRVPSAITSSVFDMKCVNQTIDPDREPVRLDQATRQPSSSGINSVSADILSGISHR 122

Query: 52  LRVSGNDRLPGAVLLAR 2
            R +G+DRLPGAVLLAR
Sbjct: 123 QRFTGSDRLPGAVLLAR 139


>ref|XP_002262757.1| PREDICTED: uncharacterized protein LOC100249808 [Vitis vinifera]
           gi|296083083|emb|CBI22487.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 46/127 (36%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
 Frame = -1

Query: 361 RFGRSSDPFGVGSDLGSPTPVDRA-----NRRHRHHNSPGGNHTRRDRLDPDGCDPLRRA 197
           R GR++ P       G   P DR+     NRR  HH           R DPDGCDPLRRA
Sbjct: 13  RLGRAAPPADFE---GLELPDDRSFHYISNRRRHHH-----------RHDPDGCDPLRRA 58

Query: 196 LHHTRQLPLPRPSHPPQERESTRLEDXXXXXXXXXXXXXXXHI--NVRDRLRVSGNDRLP 23
            H      +    + P +RE  RL+                 I   +  R R +G+DRLP
Sbjct: 59  QHFRH---ISHRVYRP-DREPVRLDQATRQPSSSGINSVSADILSGISHRQRFTGSDRLP 114

Query: 22  GAVLLAR 2
           GAVLLAR
Sbjct: 115 GAVLLAR 121


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