BLASTX nr result

ID: Rehmannia23_contig00012040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00012040
         (1522 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]   519   e-144
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g...   517   e-144
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g...   498   e-138
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g...   496   e-138
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ...   491   e-136
ref|XP_002329331.1| predicted protein [Populus trichocarpa] gi|5...   482   e-133
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g...   481   e-133
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr...   481   e-133
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr...   481   e-133
gb|AEV43362.1| poly C-binding protein [Citrus sinensis]               480   e-133
gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [...   474   e-131
gb|EOY04206.1| RNA-binding KH domain-containing protein isoform ...   459   e-126
gb|EOY04205.1| RNA-binding KH domain-containing protein isoform ...   459   e-126
gb|EOY04203.1| RNA-binding KH domain-containing protein isoform ...   459   e-126
gb|EOY04202.1| RNA-binding KH domain-containing protein isoform ...   459   e-126
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g...   458   e-126
ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g...   340   7e-91
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g...   314   7e-83
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa...   297   9e-78
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g...   297   9e-78

>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
          Length = 668

 Score =  519 bits (1336), Expect = e-144
 Identities = 273/439 (62%), Positives = 327/439 (74%), Gaps = 2/439 (0%)
 Frame = +3

Query: 210  SARFYQLMEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQS 389
            S  F+  MEG RR    KR N  FK+ GS ++G+ +N+ H +S  N +++DTVY ILC S
Sbjct: 22   SPLFWGSMEGXRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPS 81

Query: 390  TXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKA 569
                           ALREETQAKITV+DSVPGSDERVIII+S   K  K H+ +   + 
Sbjct: 82   KKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPER 141

Query: 570  EKEYDALKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVVSARLLVSNNMVGCLLG 743
            E+E D ++PHC AQDAL+KVH RI+EEDL GGT+  +D+E TVV+ARLLV NNMVGCLLG
Sbjct: 142  EEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLG 201

Query: 744  RKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNP 923
            ++GDVIQRLRSETGANIRVLP++HLP CA  +D LVQISGKPA+ +KALYEVSTLLH+NP
Sbjct: 202  KRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNP 261

Query: 924  RKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKG 1103
            RKDKPPSSF       P  + GQGFH  G    NM  P  P W  RN+++  + P+P+ G
Sbjct: 262  RKDKPPSSF-------PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMG 314

Query: 1104 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 1283
            GY  +PS   P  FDGV   H  EA  EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 315  GYRSQPSVV-PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 373

Query: 1284 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 1463
            SIHV++   ES+ERVI VSSFEALW+PRSQTI+AIL LQNKTSEYS++G +TTRLLVPSS
Sbjct: 374  SIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSS 433

Query: 1464 KVGCILGQGGHVINDMRRR 1520
            KVGCILGQGGHVIN+MRRR
Sbjct: 434  KVGCILGQGGHVINEMRRR 452



 Score = 85.1 bits (209), Expect = 7e-14
 Identities = 89/337 (26%), Positives = 140/337 (41%), Gaps = 3/337 (0%)
 Frame = +3

Query: 330  GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVII 509
            GE+S  F +      ILC +                L++ET A I V D++  S+ERVI 
Sbjct: 336  GEASGEFSMK-----ILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIR 390

Query: 510  IFSPSDKQAKRHSGDNGDKAEKEYDAL-KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDD 683
            + S                    ++AL  P     +A+L++ N+  E  D GG       
Sbjct: 391  VSS--------------------FEALWNPRSQTIEAILQLQNKTSEYSDKGG------- 423

Query: 684  ETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 863
               ++ RLLV ++ VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ LVQISG
Sbjct: 424  ---MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 480

Query: 864  KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEY 1043
               + + AL E+++ L     +D       +P    P P  G    L G L  +  S   
Sbjct: 481  NFGVAKDALAEIASRLRVRCLRDANGGVEPAPVG--PVPGFGHPGKLPGGLPSS--SGAL 536

Query: 1044 PTWLERNTDTHRMQPLPYK-GGYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEK 1220
                    +  +   L Y+   Y + P+A G   +  V    + + P+            
Sbjct: 537  GAGSSGGFELSKGGGLEYEPQSYPVPPAATG---YHNVNSSMESKIPN----------NS 583

Query: 1221 IGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 1331
            +  VIG GG NV  + +  GA + + +      E V+
Sbjct: 584  VSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVV 620


>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
            product [Vitis vinifera]
          Length = 676

 Score =  517 bits (1331), Expect = e-144
 Identities = 271/432 (62%), Positives = 323/432 (74%), Gaps = 2/432 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 410
            MEG RR    KR N  FK+ GS ++G+ +N+ H +S  N +++DTVY ILC S       
Sbjct: 1    MEGTRRGSFKKRPNFQFKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVI 60

Query: 411  XXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDAL 590
                    ALREETQAKITV+DSVPGSDERVIII+S   K  K H  +   + E+E D +
Sbjct: 61   GKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHM 120

Query: 591  KPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVVSARLLVSNNMVGCLLGRKGDVIQ 764
            +PHC AQDAL+KVH RI+EEDL GGT+  +D+E TVV+ARLLV NNMVGCLLG++GDVIQ
Sbjct: 121  EPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQ 180

Query: 765  RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 944
            RLRSETGANIRVLP++HLP CA  +D LVQISGKPA+ +KALYEVSTLLH+NPRKDKPPS
Sbjct: 181  RLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPS 240

Query: 945  SFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 1124
            SF       P  + GQGFH  G    NM  P  P W  RN+++  + P+P+ GGY  +PS
Sbjct: 241  SF-------PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPS 293

Query: 1125 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 1304
               P  FDGV   H  EA  EF++KI+C A KIGGVIGKGG NVKQL+QETGASIHV++ 
Sbjct: 294  VV-PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 352

Query: 1305 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 1484
              ES+ERVI VSSFEALW+PRSQTI+AIL LQNKTSEYS++G +TTRLLVPSSKVGCILG
Sbjct: 353  LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILG 412

Query: 1485 QGGHVINDMRRR 1520
            QGGHVIN+MRRR
Sbjct: 413  QGGHVINEMRRR 424



 Score = 85.1 bits (209), Expect = 7e-14
 Identities = 89/337 (26%), Positives = 140/337 (41%), Gaps = 3/337 (0%)
 Frame = +3

Query: 330  GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVII 509
            GE+S  F +      ILC +                L++ET A I V D++  S+ERVI 
Sbjct: 308  GEASGEFSMK-----ILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIR 362

Query: 510  IFSPSDKQAKRHSGDNGDKAEKEYDAL-KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDD 683
            + S                    ++AL  P     +A+L++ N+  E  D GG       
Sbjct: 363  VSS--------------------FEALWNPRSQTIEAILQLQNKTSEYSDKGG------- 395

Query: 684  ETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 863
               ++ RLLV ++ VGC+LG+ G VI  +R  T A+IRV   +  P CA  ++ LVQISG
Sbjct: 396  ---MTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISG 452

Query: 864  KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEY 1043
               + + AL E+++ L     +D       +P    P P  G    L G L  +  S   
Sbjct: 453  NFGVAKDALAEIASRLRVRCLRDANGGVEPAPVG--PVPGFGHPGKLPGGLPSS--SGAL 508

Query: 1044 PTWLERNTDTHRMQPLPYK-GGYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEK 1220
                    +  +   L Y+   Y + P+A G   +  V    + + P+            
Sbjct: 509  GAGSSGGFELSKGGGLEYEPQSYPVPPAATG---YHNVNSSMESKIPN----------NS 555

Query: 1221 IGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 1331
            +  VIG GG NV  + +  GA + + +      E V+
Sbjct: 556  VSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVV 592


>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
            [Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
            PREDICTED: KH domain-containing protein At4g18375-like
            isoform X2 [Solanum tuberosum]
          Length = 705

 Score =  498 bits (1282), Expect = e-138
 Identities = 261/433 (60%), Positives = 316/433 (72%), Gaps = 3/433 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 410
            M+  +RN L +RSNP FK+ G  +  K + + H  SSEN + SDT Y ILCQS       
Sbjct: 1    MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 411  XXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD-NGDKAE--KEY 581
                    ALREETQAKITV+DSVPGSD+R++I+ SPS K A+R + D N D  E  +E 
Sbjct: 61   GKGGSIIKALREETQAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 582  DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVI 761
             +++PHCAAQDALLKVHNRIVEEDL G +  +  ETV+  RLLV NN+VGCLLGRKGDVI
Sbjct: 121  CSMEPHCAAQDALLKVHNRIVEEDLQGVQNEDKSETVIITRLLVPNNLVGCLLGRKGDVI 180

Query: 762  QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 941
            Q+LRSETGA+IRVL ++HLP CA   D LVQISGKPA+V+KALYEVSTLLH+NPRKDKP 
Sbjct: 181  QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240

Query: 942  SSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRP 1121
            SSF       P  +  QGFH  GP   NM+ P  P W +  T+ + M P    GGY  + 
Sbjct: 241  SSF-------PMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQL 293

Query: 1122 SAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDN 1301
            + FG  DFD   PP   EAP +FT+KI+CSA KIGGVIGKGG NVKQL+Q+TGA IHV++
Sbjct: 294  TGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVED 353

Query: 1302 VSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCIL 1481
            V+ ESDERVI VSS E+ WDPRS+TIDAIL LQ+KTSE+S++G +TTRLL PS+KVGCI+
Sbjct: 354  VAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCII 413

Query: 1482 GQGGHVINDMRRR 1520
            GQGG VIN+MRRR
Sbjct: 414  GQGGQVINEMRRR 426



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 66/218 (30%), Positives = 95/218 (43%)
 Frame = +3

Query: 360  DTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAK 539
            D    ILC +                L+++T A I V D  P SDERVI + S       
Sbjct: 315  DFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESDERVIRVSS------- 367

Query: 540  RHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSN 719
                      E  +D   P     DA+L++ ++  E           D+ +V+ RLL  +
Sbjct: 368  ---------LESFWD---PRSRTIDAILQLQSKTSEFS---------DKGIVTTRLLFPS 406

Query: 720  NMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEV 899
            N VGC++G+ G VI  +R  T A+IRVL  D  P CA  ++ LVQISG   + + AL E+
Sbjct: 407  NKVGCIIGQGGQVINEMRRRTQADIRVLSKDDKPRCASADEELVQISGSIGVAKDALVEI 466

Query: 900  STLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGP 1013
            S+ L     +D      S+P    P     + F    P
Sbjct: 467  SSRLRERCLRDANSKVESTPVRPLPGFVPSEDFRSGDP 504


>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
            lycopersicum]
          Length = 707

 Score =  496 bits (1278), Expect = e-138
 Identities = 262/433 (60%), Positives = 315/433 (72%), Gaps = 3/433 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 410
            M+  +RN L +RSNP FK+ G  +  K + + H  SSEN + SDT Y ILCQS       
Sbjct: 1    MDEYKRNSLKQRSNPQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVI 60

Query: 411  XXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD-NGDKAE--KEY 581
                    ALREETQAKITV+DSVPGSD+R++II SPS K A+R + D N D  E  +E 
Sbjct: 61   GKGGSIIKALREETQAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEEN 120

Query: 582  DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVI 761
             +++PHCAAQDALLKVHNRIVEEDL G +  +  E V+  RLLV NN+VGCLLGRKGDVI
Sbjct: 121  YSMEPHCAAQDALLKVHNRIVEEDLLGVQNEDKSEAVIITRLLVPNNLVGCLLGRKGDVI 180

Query: 762  QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 941
            Q+LRSETGA+IRVL ++HLP CA   D LVQISGKPA+V+KALYEVSTLLH+NPRKDKP 
Sbjct: 181  QKLRSETGASIRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPI 240

Query: 942  SSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRP 1121
            SSF       P  +  QGFH  GP   NM+ P  P W +  T+ + M P    GGY  + 
Sbjct: 241  SSF-------PMVHGAQGFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQL 293

Query: 1122 SAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDN 1301
            + FG  DFD   PP   EAP +FT+KI+CSA KIGGVIGKGG NVKQL+QETGA IHV++
Sbjct: 294  TGFGRADFDYGPPPSAGEAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVED 353

Query: 1302 VSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCIL 1481
            V+ ESDERVI VSS E+ WDPRS+TIDAIL LQ+KTSE+S++G +TTRLL PS+KVGCI+
Sbjct: 354  VAPESDERVIRVSSLESFWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCII 413

Query: 1482 GQGGHVINDMRRR 1520
            GQGG VIN+MRRR
Sbjct: 414  GQGGQVINEMRRR 426



 Score = 85.9 bits (211), Expect = 4e-14
 Identities = 67/212 (31%), Positives = 94/212 (44%), Gaps = 3/212 (1%)
 Frame = +3

Query: 360 DTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAK 539
           D    ILC +                L++ET A I V D  P SDERVI + S       
Sbjct: 315 DFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESDERVIRVSS------- 367

Query: 540 RHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSN 719
                     E  +D   P     DA+L++ ++  E           D+ +V+ RLL  +
Sbjct: 368 ---------LESFWD---PRSRTIDAILQLQSKTSEFS---------DKGIVTTRLLFPS 406

Query: 720 NMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEV 899
           N VGC++G+ G VI  +R  T A+IRVL  D  P CA  ++ LVQISG   + + AL E+
Sbjct: 407 NKVGCIIGQGGQVINEMRRRTQADIRVLSKDEKPRCASADEELVQISGSIGVAKDALVEI 466

Query: 900 STLLHRNPRKD---KPPSSFSSPYASHPPPYD 986
           S+ L     +D   K  S+   P     P  D
Sbjct: 467 SSRLRERCLRDANSKVESTHVRPLPGFVPSED 498


>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
            gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
            putative [Ricinus communis]
          Length = 537

 Score =  491 bits (1263), Expect = e-136
 Identities = 263/432 (60%), Positives = 308/432 (71%), Gaps = 2/432 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXX 410
            M+GN+RN   K  N  FK+ G  RKGK +N+   ESS N    DTVY ILC S       
Sbjct: 1    MDGNKRNVFKKYQNNQFKRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVI 60

Query: 411  XXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDAL 590
                     LREETQAKITV+D VPGSDERVIII+S  +K ++ H+       E E D +
Sbjct: 61   GKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQDIM 120

Query: 591  KPHCAAQDALLKVHNRIVEEDLGGTKKGNDDET--VVSARLLVSNNMVGCLLGRKGDVIQ 764
            +P+CAAQDALLKVH+RIVEEDL G    +DD     V+ARLLV NNMVGCLLG++GDVIQ
Sbjct: 121  EPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQ 180

Query: 765  RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 944
            RLRSETGANIRVLP+DHLP CA   D LVQIS KP + +KALYEVSTLLH+NPRKDKPPS
Sbjct: 181  RLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPS 240

Query: 945  SFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 1124
                     P PY GQ FH  G   +N+     P W   N+ +H + P+P  G YG + S
Sbjct: 241  V--------PMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNS-SHSIPPMPIMGRYGSQSS 291

Query: 1125 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 1304
             FGP  FD V   H  E  +EF++KI+CSA KIGGVIGKGGSNVK ++Q+TGASIHV++ 
Sbjct: 292  GFGPGGFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDA 351

Query: 1305 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 1484
            S ESDERVI VS+ EALW+PRSQTIDAIL LQNKTS++SE+GTITTRLLVPSSKVGCILG
Sbjct: 352  SAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILG 411

Query: 1485 QGGHVINDMRRR 1520
            QGG VIN+MRRR
Sbjct: 412  QGGQVINEMRRR 423



 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 1/187 (0%)
 Frame = +3

Query: 375 ILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD 554
           ILC +                ++++T A I V D+   SDERVI + +            
Sbjct: 317 ILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSAS----------- 365

Query: 555 NGDKAEKEYDAL-KPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVG 731
                    +AL  P     DA+L++ N+  +    GT         ++ RLLV ++ VG
Sbjct: 366 ---------EALWNPRSQTIDAILQLQNKTSDFSEKGT---------ITTRLLVPSSKVG 407

Query: 732 CLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLL 911
           C+LG+ G VI  +R  T A+IRV   D  P CA  ++ LVQISGK  + + AL E+++ L
Sbjct: 408 CILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDALAEIASRL 467

Query: 912 HRNPRKD 932
                +D
Sbjct: 468 RVRTLRD 474


>ref|XP_002329331.1| predicted protein [Populus trichocarpa]
            gi|566171617|ref|XP_006383459.1| hypothetical protein
            POPTR_0005s15690g [Populus trichocarpa]
            gi|550339070|gb|ERP61256.1| hypothetical protein
            POPTR_0005s15690g [Populus trichocarpa]
          Length = 563

 Score =  482 bits (1241), Expect = e-133
 Identities = 264/435 (60%), Positives = 309/435 (71%), Gaps = 5/435 (1%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 404
            M+GNRR +  K  N  FK+ G  S RKGK  ++ HGE        DTVY ILC S     
Sbjct: 1    MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDS-HGEECSGD--GDTVYRILCPSRKIGG 57

Query: 405  XXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEK-EY 581
                      ALREETQ+KITV+DSV GSDERVIII+S SDK  ++  GD G  A   + 
Sbjct: 58   VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117

Query: 582  DALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRKGD 755
            +A +PHCAAQDALLKVH+RIVEEDL G    +DD    VV+ARLLV NNMVGC+LG++GD
Sbjct: 118  EAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGD 177

Query: 756  VIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDK 935
            VIQRLRSETGANIRVLP+DHLP CA   D LVQISGKPA+ ++ALYE+S LLH+NPRKDK
Sbjct: 178  VIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDK 237

Query: 936  PPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGI 1115
             PS         P PY G+ FH       NML P  P W  RN+  H M   P+ G YG 
Sbjct: 238  LPSV--------PMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHSM---PWMGEYGN 286

Query: 1116 RPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHV 1295
             PS FGP  F+GV P H RE  +EF++KI+CS  KIGGVIGKGGSNVK ++QETGASIHV
Sbjct: 287  HPSEFGPGGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHV 346

Query: 1296 DNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 1475
            ++ S ES+ER I VS+FE LW+PRSQTIDAIL LQ+KTS++SE+G I TRLLVPSSKVGC
Sbjct: 347  EDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGC 406

Query: 1476 ILGQGGHVINDMRRR 1520
            ILGQGG VIN+MRRR
Sbjct: 407  ILGQGGQVINEMRRR 421



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 1/213 (0%)
 Frame = +3

Query: 375  ILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD 554
            ILC +                +++ET A I V D+   S+ER I + +            
Sbjct: 315  ILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSA------------ 362

Query: 555  NGDKAEKEYDAL-KPHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVG 731
                    ++ L  P     DA+L++ ++  +     ++KG     ++  RLLV ++ VG
Sbjct: 363  --------FEGLWNPRSQTIDAILQLQDKTSDF----SEKG-----MIITRLLVPSSKVG 405

Query: 732  CLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLL 911
            C+LG+ G VI  +R    A+IRV P +  P CA  ++ LVQISG   + + AL E+++ L
Sbjct: 406  CILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRL 465

Query: 912  HRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSG 1010
                 +D   ++ + P  + P P  G   +L G
Sbjct: 466  RARTLRD--ANAGTEPGPAGPVPGFGPARNLPG 496


>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
          Length = 715

 Score =  481 bits (1238), Expect = e-133
 Identities = 255/434 (58%), Positives = 309/434 (71%), Gaps = 4/434 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 404
            M+ ++RNF  KR N  FK+ G    +KG   N+   +S  N + +DTVY ILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 405  XXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 584
                      +LREETQAKITV+D++PGS+ERVIII+S   K AK+ + D+   AE + +
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKKE 120

Query: 585  ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRKGDV 758
            +++PHCAAQDALLKVH+RI+EEDL G    +DD   + V+ARLLV NNMVGCLLG++GDV
Sbjct: 121  SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 759  IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 938
            IQRLRSETGANIRVLP+D LP CA   D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181  IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 939  PSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
            PSSF       P  Y GQ FH       +M      +W  RN+  H M   P+ GGYG +
Sbjct: 241  PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
            PS  G    +   P    E  +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294  PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353

Query: 1299 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 1478
            +   +SDERVI  S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354  DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413

Query: 1479 LGQGGHVINDMRRR 1520
            LGQGGHVIN+MRRR
Sbjct: 414  LGQGGHVINEMRRR 427



 Score =  102 bits (254), Expect = 4e-19
 Identities = 92/337 (27%), Positives = 136/337 (40%), Gaps = 3/337 (0%)
 Frame = +3

Query: 330  GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVII 509
            GE S  F +      ILC +                L++ET A I V D+   SDERVI 
Sbjct: 311  GEVSAEFSMK-----ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI- 364

Query: 510  IFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDET 689
                              +A        P     DA+L++ N+  E    GT        
Sbjct: 365  ------------------RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-------- 398

Query: 690  VVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKP 869
             ++ RLLV ++ VGC+LG+ G VI  +R  T A+IRV   D  P CA  ++ LVQISG  
Sbjct: 399  -ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNF 457

Query: 870  AIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPT 1049
             + + AL E+++ L     +D    +  +P           G    GPL    +      
Sbjct: 458  GVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISG 517

Query: 1050 WLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREAP---SEFTLKIICSAEK 1220
              E           P++GGY   P ++ P       PP     P   S F  +I   A  
Sbjct: 518  GYE-----------PFRGGYDYEPQSYPPP--PSAPPPSATGYPNMNSAFEARIPNKA-- 562

Query: 1221 IGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 1331
            +G V+G GGSN+  + +  GA + + +    S E ++
Sbjct: 563  VGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECIV 599


>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
            gi|557532839|gb|ESR44022.1| hypothetical protein
            CICLE_v10011187mg [Citrus clementina]
          Length = 528

 Score =  481 bits (1238), Expect = e-133
 Identities = 255/434 (58%), Positives = 308/434 (70%), Gaps = 4/434 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 404
            M+ ++RNF  KR N  FK+ G    +KG   N+   +S  N + +DTVY ILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 405  XXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 584
                      +LREETQAKITV+D++PGS+ERVIII+S   K AK  + D+   AE + +
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 585  ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRKGDV 758
            +++PHCAAQDALLKVH+RI+EEDL G    +DD   + V+ARLLV NNMVGCLLG++GDV
Sbjct: 121  SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 759  IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 938
            IQRLRSETGANIRVLP+D LP CA   D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181  IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 939  PSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
            PSSF       P  Y GQ FH       +M      +W  RN+  H M   P+ GGYG +
Sbjct: 241  PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
            PS  G    +   P    E  +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294  PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353

Query: 1299 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 1478
            +   +SDERVI  S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354  DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413

Query: 1479 LGQGGHVINDMRRR 1520
            LGQGGHVIN+MRRR
Sbjct: 414  LGQGGHVINEMRRR 427



 Score = 80.5 bits (197), Expect = 2e-12
 Identities = 62/201 (30%), Positives = 88/201 (43%)
 Frame = +3

Query: 330 GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVII 509
           GE S  F +      ILC +                L++ET A I V D+   SDERVI 
Sbjct: 311 GEVSAEFSMK-----ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI- 364

Query: 510 IFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDET 689
                             +A        P     DA+L++ N+  E    GT        
Sbjct: 365 ------------------RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-------- 398

Query: 690 VVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKP 869
            ++ RLLV ++ VGC+LG+ G VI  +R  T A+IRV   D  P CA  ++ LVQISG  
Sbjct: 399 -ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNF 457

Query: 870 AIVRKALYEVSTLLHRNPRKD 932
            + + AL E+++ L     +D
Sbjct: 458 GVAKDALTEIASRLRARTLRD 478


>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
            gi|557532838|gb|ESR44021.1| hypothetical protein
            CICLE_v10011187mg [Citrus clementina]
          Length = 710

 Score =  481 bits (1238), Expect = e-133
 Identities = 255/434 (58%), Positives = 308/434 (70%), Gaps = 4/434 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 404
            M+ ++RNF  KR N  FK+ G    +KG   N+   +S  N + +DTVY ILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 405  XXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 584
                      +LREETQAKITV+D++PGS+ERVIII+S   K AK  + D+   AE + +
Sbjct: 61   VIGKGGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 585  ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRKGDV 758
            +++PHCAAQDALLKVH+RI+EEDL G    +DD   + V+ARLLV NNMVGCLLG++GDV
Sbjct: 121  SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDV 180

Query: 759  IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 938
            IQRLRSETGANIRVLP+D LP CA   D LVQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181  IQRLRSETGANIRVLPADRLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 939  PSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
            PSSF       P  Y GQ FH       +M      +W  RN+  H M   P+ GGYG +
Sbjct: 241  PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
            PS  G    +   P    E  +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294  PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353

Query: 1299 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 1478
            +   +SDERVI  S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354  DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413

Query: 1479 LGQGGHVINDMRRR 1520
            LGQGGHVIN+MRRR
Sbjct: 414  LGQGGHVINEMRRR 427



 Score =  101 bits (252), Expect = 7e-19
 Identities = 92/337 (27%), Positives = 136/337 (40%), Gaps = 3/337 (0%)
 Frame = +3

Query: 330  GESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVII 509
            GE S  F +      ILC +                L++ET A I V D+   SDERVI 
Sbjct: 311  GEVSAEFSMK-----ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI- 364

Query: 510  IFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDET 689
                              +A        P     DA+L++ N+  E    GT        
Sbjct: 365  ------------------RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-------- 398

Query: 690  VVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKP 869
             ++ RLLV ++ VGC+LG+ G VI  +R  T A+IRV   D  P CA  ++ LVQISG  
Sbjct: 399  -ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELVQISGNF 457

Query: 870  AIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPT 1049
             + + AL E+++ L     +D    +  +P           G    GPL    +      
Sbjct: 458  GVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAGGLPSRGPLPSGPVGAGISG 517

Query: 1050 WLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREAP---SEFTLKIICSAEK 1220
              E           P++GGY   P ++ P       PP     P   S F  +I   A  
Sbjct: 518  GYE-----------PFRGGYDYEPQSYPP-------PPSAMGYPNMNSAFEARIPNKA-- 557

Query: 1221 IGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVI 1331
            +G V+G GGSN+  + +  GA + + +    S E ++
Sbjct: 558  VGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIV 594


>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
          Length = 569

 Score =  480 bits (1235), Expect = e-133
 Identities = 253/434 (58%), Positives = 308/434 (70%), Gaps = 4/434 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSG--SPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXX 404
            M+ ++RNF  KR N  FK+ G    +KG   N+   +S  N + +DTVY ILC S     
Sbjct: 1    MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60

Query: 405  XXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYD 584
                      +LREETQAKITV+D++PGS+ERVIII+S   K AK  + D+   AE + +
Sbjct: 61   VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120

Query: 585  ALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRKGDV 758
            +++PHCAAQDALLKVH+RI+EEDL G    +DD   + ++ARLLV NNMVGCLLG++GDV
Sbjct: 121  SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 180

Query: 759  IQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKP 938
            IQRLRSETGANIRVLP+D LP CA   D +VQISGKP + ++ALYEVSTLLH+NPRKDKP
Sbjct: 181  IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240

Query: 939  PSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
            PSSF       P  Y GQ FH       +M      +W  RN+  H M   P+ GGYG +
Sbjct: 241  PSSF-------PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 293

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
            PS  G    +   P    E  +EF++KI+CSA KIGGVIGKGG NVKQL+QETGASIHV+
Sbjct: 294  PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 353

Query: 1299 NVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCI 1478
            +   +SDERVI  S+FE LW+PRSQTIDAIL LQNKTSE+SE+GTITTRLLVPSSKVGCI
Sbjct: 354  DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 413

Query: 1479 LGQGGHVINDMRRR 1520
            LGQGGHVIN+MRRR
Sbjct: 414  LGQGGHVINEMRRR 427


>gb|EMJ18848.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
          Length = 576

 Score =  474 bits (1219), Expect = e-131
 Identities = 259/435 (59%), Positives = 304/435 (69%), Gaps = 5/435 (1%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSP---RKGKQHNTVHGESSENFRLSDTVYYILCQSTXXX 401
            M+GN+RNF  KR N  FK+ G     +KG  +N+   +  EN++  DTVY ILC S    
Sbjct: 1    MDGNKRNFFKKRPNVQFKRKGGNNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIG 60

Query: 402  XXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEY 581
                       ALREET+AKITV+DSV GSDERVIIIFS   K + + + D     E E 
Sbjct: 61   GVIGKGGGIVKALREETRAKITVADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL 120

Query: 582  DALKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDE-TVVSARLLVSNNMVGCLLGRKGD 755
            + + PHCAAQDALLKVHNRIVEEDL GG    +D+E +VV+ARLLV NNMVGCLLG+ GD
Sbjct: 121  EPMDPHCAAQDALLKVHNRIVEEDLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGD 180

Query: 756  VIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDK 935
            VIQRLRSET A+IRVLP+D LP CA   D LVQISGKP + ++ALYEVSTLLH+NPRKDK
Sbjct: 181  VIQRLRSETSASIRVLPADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDK 240

Query: 936  PPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGI 1115
            PPS F       P P+ GQGF   G    N+L P  P W  R   +H   P+P   GYG 
Sbjct: 241  PPSGF-------PMPFWGQGFRPPGAPMTNVLPPGNPMWSNR-APSHSTAPMPRMEGYGN 292

Query: 1116 RPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHV 1295
              S F    F+GV P H  EA +EF++KI+CS  KIGGVIGKGG NVKQL+ ETGASIHV
Sbjct: 293  CSSEFALGGFNGVPPGHGGEALAEFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHV 352

Query: 1296 DNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 1475
               S +S+ERVI VS+FEA W+P SQTI+AIL LQNKTSE S++G ITTRLLVPSSKVGC
Sbjct: 353  QEASTDSEERVIHVSAFEAFWNPISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGC 412

Query: 1476 ILGQGGHVINDMRRR 1520
            ILGQGG VIN+MRRR
Sbjct: 413  ILGQGGQVINEMRRR 427



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
 Frame = +3

Query: 438 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDAL-KPHCAAQD 614
           L+ ET A I V ++   S+ERVI + +                    ++A   P     +
Sbjct: 342 LQLETGASIHVQEASTDSEERVIHVSA--------------------FEAFWNPISQTIE 381

Query: 615 ALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANI 794
           A+L++ N+  E           D+ +++ RLLV ++ VGC+LG+ G VI  +R  T A+I
Sbjct: 382 AILELQNKTSELS---------DKGIITTRLLVPSSKVGCILGQGGQVINEMRRRTQADI 432

Query: 795 RVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKD 932
           RV   D  P CA  ++ LVQISG   + + AL E+++ L     +D
Sbjct: 433 RVYSKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRD 478


>gb|EOY04206.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
          Length = 591

 Score =  459 bits (1180), Expect = e-126
 Identities = 249/439 (56%), Positives = 300/439 (68%), Gaps = 9/439 (2%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 401
            M+G +RNFL K  N  FK+ G     K     N+ H + S NF   DTVY +LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 402  XXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 575
                       ALREETQAKITV DSV G DERVIII+S   K   ++S ++  G+  + 
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120

Query: 576  EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRK 749
            E   ++P CAAQDALLKVH++I E+DL G    +DD   TVV+ARLLV NNMVGCLLG++
Sbjct: 121  EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180

Query: 750  GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 929
            GDVIQRLRSETGA+IR+LP+DHLP CA   D LVQISGK  + ++ALYEVSTLLH+NPRK
Sbjct: 181  GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240

Query: 930  DKPPSSFSSPYASH--PPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKG 1103
            D PP SF  P+A    PPP              + + P  P W  RN+  H +  +P+  
Sbjct: 241  DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286

Query: 1104 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 1283
             +G RPS FGP       P    EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287  PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346

Query: 1284 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 1463
             IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347  GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406

Query: 1464 KVGCILGQGGHVINDMRRR 1520
            KVGCILGQGGHVIN+MRRR
Sbjct: 407  KVGCILGQGGHVINEMRRR 425



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 59/174 (33%), Positives = 84/174 (48%)
 Frame = +3

Query: 438 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDA 617
           L++ET A I V D+   SDERVI           R S   G           P     DA
Sbjct: 340 LQQETGAGIHVEDATIESDERVI-----------RVSAIEG--------LWNPRSQTIDA 380

Query: 618 LLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIR 797
           +L++ N+  E    GT         V+ RLLV ++ VGC+LG+ G VI  +R  T A+IR
Sbjct: 381 ILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 431

Query: 798 VLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSP 959
           V   D  P CA  ++ LVQISG   + + AL E+++ L     +D    + ++P
Sbjct: 432 VYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAP 485


>gb|EOY04205.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
          Length = 706

 Score =  459 bits (1180), Expect = e-126
 Identities = 249/439 (56%), Positives = 300/439 (68%), Gaps = 9/439 (2%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 401
            M+G +RNFL K  N  FK+ G     K     N+ H + S NF   DTVY +LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 402  XXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 575
                       ALREETQAKITV DSV G DERVIII+S   K   ++S ++  G+  + 
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120

Query: 576  EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRK 749
            E   ++P CAAQDALLKVH++I E+DL G    +DD   TVV+ARLLV NNMVGCLLG++
Sbjct: 121  EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180

Query: 750  GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 929
            GDVIQRLRSETGA+IR+LP+DHLP CA   D LVQISGK  + ++ALYEVSTLLH+NPRK
Sbjct: 181  GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240

Query: 930  DKPPSSFSSPYASH--PPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKG 1103
            D PP SF  P+A    PPP              + + P  P W  RN+  H +  +P+  
Sbjct: 241  DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286

Query: 1104 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 1283
             +G RPS FGP       P    EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287  PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346

Query: 1284 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 1463
             IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347  GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406

Query: 1464 KVGCILGQGGHVINDMRRR 1520
            KVGCILGQGGHVIN+MRRR
Sbjct: 407  KVGCILGQGGHVINEMRRR 425



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 59/174 (33%), Positives = 84/174 (48%)
 Frame = +3

Query: 438 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDA 617
           L++ET A I V D+   SDERVI           R S   G           P     DA
Sbjct: 340 LQQETGAGIHVEDATIESDERVI-----------RVSAIEG--------LWNPRSQTIDA 380

Query: 618 LLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIR 797
           +L++ N+  E    GT         V+ RLLV ++ VGC+LG+ G VI  +R  T A+IR
Sbjct: 381 ILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 431

Query: 798 VLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSP 959
           V   D  P CA  ++ LVQISG   + + AL E+++ L     +D    + ++P
Sbjct: 432 VYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAP 485


>gb|EOY04203.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
          Length = 580

 Score =  459 bits (1180), Expect = e-126
 Identities = 249/439 (56%), Positives = 300/439 (68%), Gaps = 9/439 (2%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 401
            M+G +RNFL K  N  FK+ G     K     N+ H + S NF   DTVY +LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 402  XXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 575
                       ALREETQAKITV DSV G DERVIII+S   K   ++S ++  G+  + 
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120

Query: 576  EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRK 749
            E   ++P CAAQDALLKVH++I E+DL G    +DD   TVV+ARLLV NNMVGCLLG++
Sbjct: 121  EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180

Query: 750  GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 929
            GDVIQRLRSETGA+IR+LP+DHLP CA   D LVQISGK  + ++ALYEVSTLLH+NPRK
Sbjct: 181  GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240

Query: 930  DKPPSSFSSPYASH--PPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKG 1103
            D PP SF  P+A    PPP              + + P  P W  RN+  H +  +P+  
Sbjct: 241  DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286

Query: 1104 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 1283
             +G RPS FGP       P    EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287  PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346

Query: 1284 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 1463
             IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347  GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406

Query: 1464 KVGCILGQGGHVINDMRRR 1520
            KVGCILGQGGHVIN+MRRR
Sbjct: 407  KVGCILGQGGHVINEMRRR 425



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 59/174 (33%), Positives = 84/174 (48%)
 Frame = +3

Query: 438 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDA 617
           L++ET A I V D+   SDERVI           R S   G           P     DA
Sbjct: 340 LQQETGAGIHVEDATIESDERVI-----------RVSAIEG--------LWNPRSQTIDA 380

Query: 618 LLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIR 797
           +L++ N+  E    GT         V+ RLLV ++ VGC+LG+ G VI  +R  T A+IR
Sbjct: 381 ILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 431

Query: 798 VLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSP 959
           V   D  P CA  ++ LVQISG   + + AL E+++ L     +D    + ++P
Sbjct: 432 VYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAP 485


>gb|EOY04202.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
            gi|508712307|gb|EOY04204.1| RNA-binding KH
            domain-containing protein isoform 1 [Theobroma cacao]
          Length = 706

 Score =  459 bits (1180), Expect = e-126
 Identities = 249/439 (56%), Positives = 300/439 (68%), Gaps = 9/439 (2%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSPRKGKQH---NTVHGESSENFRLSDTVYYILCQSTXXX 401
            M+G +RNFL K  N  FK+ G     K     N+ H + S NF   DTVY +LC S    
Sbjct: 1    MDGRKRNFLKKPMNTPFKRKGVNNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIG 60

Query: 402  XXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDN--GDKAEK 575
                       ALREETQAKITV DSV G DERVIII+S   K   ++S ++  G+  + 
Sbjct: 61   GVIGKGGSIVKALREETQAKITVGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKD 120

Query: 576  EYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDDE--TVVSARLLVSNNMVGCLLGRK 749
            E   ++P CAAQDALLKVH++I E+DL G    +DD   TVV+ARLLV NNMVGCLLG++
Sbjct: 121  EVVVMEPCCAAQDALLKVHDQIAEDDLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKR 180

Query: 750  GDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRK 929
            GDVIQRLRSETGA+IR+LP+DHLP CA   D LVQISGK  + ++ALYEVSTLLH+NPRK
Sbjct: 181  GDVIQRLRSETGASIRILPADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRK 240

Query: 930  DKPPSSFSSPYASH--PPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKG 1103
            D PP SF  P+A    PPP              + + P  P W  RN+  H +  +P+  
Sbjct: 241  DNPPLSFPVPHAGQNFPPP--------------SAIPPSNPMWSHRNSSPHDIPSMPWMV 286

Query: 1104 GYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGA 1283
             +G RPS FGP       P    EA +EF++KI+C A KIGGVIGKGG NVKQL+QETGA
Sbjct: 287  PHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGA 346

Query: 1284 SIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSS 1463
             IHV++ + ESDERVI VS+ E LW+PRSQTIDAIL LQNKTSE+SE+GT+TTRLLVPSS
Sbjct: 347  GIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTSEFSEKGTVTTRLLVPSS 406

Query: 1464 KVGCILGQGGHVINDMRRR 1520
            KVGCILGQGGHVIN+MRRR
Sbjct: 407  KVGCILGQGGHVINEMRRR 425



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 59/174 (33%), Positives = 84/174 (48%)
 Frame = +3

Query: 438 LREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDA 617
           L++ET A I V D+   SDERVI           R S   G           P     DA
Sbjct: 340 LQQETGAGIHVEDATIESDERVI-----------RVSAIEG--------LWNPRSQTIDA 380

Query: 618 LLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIR 797
           +L++ N+  E    GT         V+ RLLV ++ VGC+LG+ G VI  +R  T A+IR
Sbjct: 381 ILQLQNKTSEFSEKGT---------VTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 431

Query: 798 VLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSSFSSP 959
           V   D  P CA  ++ LVQISG   + + AL E+++ L     +D    + ++P
Sbjct: 432 VYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAP 485


>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
            vesca subsp. vesca]
          Length = 760

 Score =  458 bits (1179), Expect = e-126
 Identities = 252/432 (58%), Positives = 302/432 (69%), Gaps = 2/432 (0%)
 Frame = +3

Query: 231  MEGNRRNFLNKRSNPHFKKSGSP-RKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXX 407
            M+ N+RN L++R    FK+ GS  +KG  +N+   +SS N +  +TVY ILC S      
Sbjct: 1    MDWNKRNVLSQRPTVQFKRKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGV 60

Query: 408  XXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDA 587
                     +LREET++KITVSDSVPGSDERVIIIFSP  K +++ + D       E   
Sbjct: 61   IGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSHKADEQKP 120

Query: 588  LKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQ 764
            L+PHCAAQDALLKVH+RIVEEDL  G    +D+E +V  RLLV NN+VGCLLG++GDVIQ
Sbjct: 121  LEPHCAAQDALLKVHDRIVEEDLYDGVTFDDDNENIVVTRLLVPNNLVGCLLGKRGDVIQ 180

Query: 765  RLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPS 944
            RLRSET ANIRVLP+D LP CA   D LVQISGKP + +KALYEVSTLLH+NPRKDKPP 
Sbjct: 181  RLRSETRANIRVLPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPL 240

Query: 945  SFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIRPS 1124
              + P+        GQGFHL G    NM  P  P W  R   +H M P+P+ G      S
Sbjct: 241  GLAIPFG-------GQGFHLRG--APNMFPPGNPIWPNREP-SHGMPPMPWIGECENHSS 290

Query: 1125 AFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNV 1304
             +G   FDG    H  EA +EF +KI+CSA KIGGVIGKGG NVKQL++ETGA+IHV + 
Sbjct: 291  GYGRGGFDGDPAGHGVEASAEFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDA 350

Query: 1305 SKESDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGCILG 1484
            S +S+ERVI VS+FE L  PRSQTI+AIL LQNK SE S++GTITTRLLVPSSKVGCILG
Sbjct: 351  STDSEERVIRVSAFEVLRIPRSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILG 410

Query: 1485 QGGHVINDMRRR 1520
            QGG VIN+MRRR
Sbjct: 411  QGGQVINEMRRR 422



 Score = 82.4 bits (202), Expect = 5e-13
 Identities = 84/312 (26%), Positives = 123/312 (39%), Gaps = 15/312 (4%)
 Frame = +3

Query: 375  ILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGD 554
            ILC +                L+EET A I V D+   S+ERVI + +            
Sbjct: 316  ILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSEERVIRVSA------------ 363

Query: 555  NGDKAEKEYDALK-PHCAAQDALLKVHNRIVEEDLGGTKKGNDDETVVSARLLVSNNMVG 731
                    ++ L+ P     +A+L++ N+  E    GT         ++ RLLV ++ VG
Sbjct: 364  --------FEVLRIPRSQTIEAILQLQNKASELSDKGT---------ITTRLLVPSSKVG 406

Query: 732  CLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLL 911
            C+LG+ G VI  +R  T A+IRV   D  P CA  ++ LVQISG  A+ + AL E+++ L
Sbjct: 407  CILGQGGQVINEMRRRTQADIRVYSKDDRPKCADEDEELVQISGNFAVAKDALAEITSRL 466

Query: 912  HRNPRKDK----------PPSSF----SSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPT 1049
                 +D           PP  F    S P    PPP        SG             
Sbjct: 467  RIRTLRDTNAGEEHAPVGPPPRFGPPGSLPVKGMPPPLSAVRAGSSG------------R 514

Query: 1050 WLERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGG 1229
            +       H  +P     GY + P+A G   +  V    D   P+            +G 
Sbjct: 515  YDHLKVGRHEYEP----EGYPVPPAASG---YQRVNRALDSRIPN----------NAVGS 557

Query: 1230 VIGKGGSNVKQL 1265
              G GGS+V  +
Sbjct: 558  FTGIGGSDVSHI 569


>ref|XP_004306018.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
            vesca subsp. vesca]
          Length = 344

 Score =  340 bits (873), Expect = 7e-91
 Identities = 202/387 (52%), Positives = 239/387 (61%), Gaps = 1/387 (0%)
 Frame = +3

Query: 336  SSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSDSVPGSDERVIIIF 515
            SS N    +T+Y ILC S               +LREET++KITVSDSVPGSDERVIIIF
Sbjct: 7    SSGNTLSLETLYRILCPSKKIGGVIGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIF 66

Query: 516  SPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDL-GGTKKGNDDETV 692
            SP  K +++ + D       E   L+PHCAAQDALLKVH+RIVEEDL  G    +D+E +
Sbjct: 67   SPPTKISRKQNSDEDSHKADEQKPLEPHCAAQDALLKVHDRIVEEDLYNGVTFDDDNENI 126

Query: 693  VSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPA 872
            V  RLLV NN+VGCLLG++G+VI+RLRSET ANIRVL +D LP CA   D L  ISGKP 
Sbjct: 127  VVTRLLVPNNLVGCLLGKRGEVIKRLRSETRANIRVLHADQLPTCALDTDEL--ISGKPD 184

Query: 873  IVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTW 1052
            + ++ALYEVSTLLH+NPRKDKPP   + P+        GQGFHL G    NM  P  P W
Sbjct: 185  VAKRALYEVSTLLHKNPRKDKPPLGLAIPFG-------GQGFHLRG--APNMFPPGNPMW 235

Query: 1053 LERNTDTHRMQPLPYKGGYGIRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGV 1232
              R   +H M P+ + G Y    S +G  DFD     H                    GV
Sbjct: 236  PYRE-PSHGMPPMSWIGEYENHSSGYGRGDFDRDPAGH--------------------GV 274

Query: 1233 IGKGGSNVKQLEQETGASIHVDNVSKESDERVICVSSFEALWDPRSQTIDAILHLQNKTS 1412
            IGKGG NVKQL++ETGA+IHV                 + L  PRSQTI+A L LQNK S
Sbjct: 275  IGKGGFNVKQLQEETGANIHV-----------------QVLRSPRSQTIEANLQLQNKAS 317

Query: 1413 EYSEEGTITTRLLVPSSKVGCILGQGG 1493
            E S++GTITTRLLVPSSKVGCILGQGG
Sbjct: 318  ELSDKGTITTRLLVPSSKVGCILGQGG 344



 Score = 72.0 bits (175), Expect = 6e-10
 Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 29/139 (20%)
 Frame = +3

Query: 1185 EFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVDNVSKESDERVICVSS------- 1343
            E   +I+C ++KIGGVIGKGG  +K L +ET + I V +    SDERVI + S       
Sbjct: 15   ETLYRILCPSKKIGGVIGKGGGIIKSLREETRSKITVSDSVPGSDERVIIIFSPPTKISR 74

Query: 1344 ------------FEALWDPRSQTIDAILHLQNK----------TSEYSEEGTITTRLLVP 1457
                         +   +P     DA+L + ++          T +   E  + TRLLVP
Sbjct: 75   KQNSDEDSHKADEQKPLEPHCAAQDALLKVHDRIVEEDLYNGVTFDDDNENIVVTRLLVP 134

Query: 1458 SSKVGCILGQGGHVINDMR 1514
            ++ VGC+LG+ G VI  +R
Sbjct: 135  NNLVGCLLGKRGEVIKRLR 153


>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
            brachyantha]
          Length = 773

 Score =  314 bits (804), Expect = 7e-83
 Identities = 198/437 (45%), Positives = 259/437 (59%), Gaps = 11/437 (2%)
 Frame = +3

Query: 243  RRNFLNKRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXXXX 422
            R N    R  PH   +   RK K+ NT H + S + + ++T+Y ILC             
Sbjct: 8    RHNLSTSRKRPH--SNSDDRKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGG 65

Query: 423  XXXXALREETQAKITVSDSVPGSDERVIIIFS-PS---DKQAKRHSGDNGDKAEKEYDAL 590
                ALR+ET+AKI V+DS+PG+DERVIIIF+ PS   D +A ++   +G      +  +
Sbjct: 66   DVVKALRDETKAKIRVADSIPGADERVIIIFNYPSQSEDDEAAQNISTDG------FQNM 119

Query: 591  KPHCAAQDALLKVHNRIVE-EDLGGTKKGNDDETV--VSARLLVSNNMVGCLLGRKGDVI 761
            KPHC AQDALLK+H++I E EDL G       ETV  V+AR+LV  N VGCLLG+ G +I
Sbjct: 120  KPHCFAQDALLKIHDKIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSII 179

Query: 762  QRLRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPP 941
            Q+LR+ETGA IRVLPS++LP CA ++D LVQISG P++VRKALYE+ST LH++PRKD PP
Sbjct: 180  QQLRNETGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPP 239

Query: 942  SS---FSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYG 1112
                  +S    H  P      +   P      SP+ P       D +R  PL Y  G  
Sbjct: 240  LEEIIDASTQRKHQSPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNGPLRYHAG-- 292

Query: 1113 IRPSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIH 1292
                                    EF++KI+C++E IG VIGK G NV+Q+EQ+TGA I 
Sbjct: 293  ---------------------EAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQ 331

Query: 1293 VDNVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKV 1469
            V  V K  S ER+I VSS E   DP S TI+A++ L +K S  +E   +TTRL+VPS+KV
Sbjct: 332  VKEVGKNASGERLIVVSSQEIPDDPVSPTIEALILLHSKVSAPAENRHLTTRLVVPSNKV 391

Query: 1470 GCILGQGGHVINDMRRR 1520
            GCILG+GG VI +MRRR
Sbjct: 392  GCILGEGGKVITEMRRR 408



 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
 Frame = +3

Query: 327 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSD-SVPGSDERV 503
           H   +E F +      ILC S                + ++T A+I V +     S ER+
Sbjct: 290 HAGEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERL 344

Query: 504 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 683
           I++ S                 E   D + P     +AL+ +H+++             +
Sbjct: 345 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV---------SAPAE 376

Query: 684 ETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 863
              ++ RL+V +N VGC+LG  G VI  +R  TGA IRV      P     ++ LVQ++G
Sbjct: 377 NRHLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 436

Query: 864 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDG 989
            PAI R AL E+++ L     +D   S+   P+A    P+DG
Sbjct: 437 LPAIARGALTEIASRLRTRTLRDGSSSNNPPPFA----PFDG 474


>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
          Length = 677

 Score =  297 bits (760), Expect = 9e-78
 Identities = 187/435 (42%), Positives = 258/435 (59%), Gaps = 8/435 (1%)
 Frame = +3

Query: 240  NRRNFLN-KRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXX 416
            +RR+  N  R  PHF      RK  + N+ H + + +    +T+Y ILC           
Sbjct: 6    SRRHKSNTSRKRPHFNSDDGKRK--RLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63

Query: 417  XXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKP 596
                  ALR+ T+AKI V+DS+PG+DERVIIIF+ S +  +     + D     ++ +KP
Sbjct: 64   GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDG----FEDMKP 119

Query: 597  HCAAQDALLKVHNRIV-EEDL--GGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQR 767
            HC AQDALLK+H++I  +EDL  G   + +++   V AR+LV  N VGCLLG+ G +IQ+
Sbjct: 120  HCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQ 179

Query: 768  LRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSS 947
            LR++TGA IRVLPS++LP CA ++D LVQISG  ++VRKALYE+ST LH++PRKD PP  
Sbjct: 180  LRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLE 239

Query: 948  ---FSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
                +S    H  P      +   P      SP+ P       D +R +PL Y       
Sbjct: 240  EIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNRPLQY------- 287

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
                           H  EA  EF++KI+C++E IG VIGK G NV+Q+EQ+TGA + V 
Sbjct: 288  ---------------HSAEA-EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVK 331

Query: 1299 NVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 1475
             V K  S+ER+I VSS E   DP S TI+A++ L +K S  +E   +TTRL+VPS+KVGC
Sbjct: 332  EVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGC 391

Query: 1476 ILGQGGHVINDMRRR 1520
            I+G+GG VI +MRRR
Sbjct: 392  IIGEGGKVITEMRRR 406



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
 Frame = +3

Query: 327 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSD-SVPGSDERV 503
           H   +E F +      ILC S                + ++T A + V +     S+ER+
Sbjct: 288 HSAEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342

Query: 504 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 683
           I++ S                 E   D + P     +AL+ +H+++       T   N  
Sbjct: 343 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV------STLAENHH 377

Query: 684 ETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 863
            T    RL+V +N VGC++G  G VI  +R  TGA IRV      P     ++ LVQ++G
Sbjct: 378 LTT---RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 434

Query: 864 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDG 989
            PAI R AL E+++ L     +D   S+  +P+A    P+DG
Sbjct: 435 LPAIARGALTEIASRLRTRTLRDGSSSNNPTPFA----PFDG 472


>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
            putative RNA-binding protein [Oryza sativa Japonica
            Group] gi|110289325|gb|ABB47821.2| KH domain containing
            protein, expressed [Oryza sativa Japonica Group]
            gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
            Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 762

 Score =  297 bits (760), Expect = 9e-78
 Identities = 187/435 (42%), Positives = 258/435 (59%), Gaps = 8/435 (1%)
 Frame = +3

Query: 240  NRRNFLN-KRSNPHFKKSGSPRKGKQHNTVHGESSENFRLSDTVYYILCQSTXXXXXXXX 416
            +RR+  N  R  PHF      RK  + N+ H + + +    +T+Y ILC           
Sbjct: 6    SRRHKSNTSRKRPHFNSDDGKRK--RLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGR 63

Query: 417  XXXXXXALREETQAKITVSDSVPGSDERVIIIFSPSDKQAKRHSGDNGDKAEKEYDALKP 596
                  ALR+ T+AKI V+DS+PG+DERVIIIF+ S +  +     + D     ++ +KP
Sbjct: 64   GGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDG----FEDMKP 119

Query: 597  HCAAQDALLKVHNRIV-EEDL--GGTKKGNDDETVVSARLLVSNNMVGCLLGRKGDVIQR 767
            HC AQDALLK+H++I  +EDL  G   + +++   V AR+LV  N VGCLLG+ G +IQ+
Sbjct: 120  HCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQ 179

Query: 768  LRSETGANIRVLPSDHLPVCARRNDLLVQISGKPAIVRKALYEVSTLLHRNPRKDKPPSS 947
            LR++TGA IRVLPS++LP CA ++D LVQISG  ++VRKALYE+ST LH++PRKD PP  
Sbjct: 180  LRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLE 239

Query: 948  ---FSSPYASHPPPYDGQGFHLSGPLTRNMLSPEYPTWLERNTDTHRMQPLPYKGGYGIR 1118
                +S    H  P      +   P      SP+ P       D +R +PL Y       
Sbjct: 240  EIIDASTQRKHQAPPQLPHANPMLPHLHVDHSPQIPL-----LDPYRNRPLQY------- 287

Query: 1119 PSAFGPDDFDGVTPPHDREAPSEFTLKIICSAEKIGGVIGKGGSNVKQLEQETGASIHVD 1298
                           H  EA  EF++KI+C++E IG VIGK G NV+Q+EQ+TGA + V 
Sbjct: 288  ---------------HSAEA-EEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVK 331

Query: 1299 NVSKE-SDERVICVSSFEALWDPRSQTIDAILHLQNKTSEYSEEGTITTRLLVPSSKVGC 1475
             V K  S+ER+I VSS E   DP S TI+A++ L +K S  +E   +TTRL+VPS+KVGC
Sbjct: 332  EVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGC 391

Query: 1476 ILGQGGHVINDMRRR 1520
            I+G+GG VI +MRRR
Sbjct: 392  IIGEGGKVITEMRRR 406



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 1/222 (0%)
 Frame = +3

Query: 327 HGESSENFRLSDTVYYILCQSTXXXXXXXXXXXXXXALREETQAKITVSD-SVPGSDERV 503
           H   +E F +      ILC S                + ++T A + V +     S+ER+
Sbjct: 288 HSAEAEEFSIK-----ILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERL 342

Query: 504 IIIFSPSDKQAKRHSGDNGDKAEKEYDALKPHCAAQDALLKVHNRIVEEDLGGTKKGNDD 683
           I++ S                 E   D + P     +AL+ +H+++       T   N  
Sbjct: 343 IVVSSQ----------------EIPDDPVSPTI---EALILLHSKV------STLAENHH 377

Query: 684 ETVVSARLLVSNNMVGCLLGRKGDVIQRLRSETGANIRVLPSDHLPVCARRNDLLVQISG 863
            T    RL+V +N VGC++G  G VI  +R  TGA IRV      P     ++ LVQ++G
Sbjct: 378 LTT---RLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAG 434

Query: 864 KPAIVRKALYEVSTLLHRNPRKDKPPSSFSSPYASHPPPYDG 989
            PAI R AL E+++ L     +D   S+  +P+A    P+DG
Sbjct: 435 LPAIARGALTEIASRLRTRTLRDGSSSNNPTPFA----PFDG 472


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