BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00012034
         (755 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...   122   1e-25
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...   122   2e-25
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...   122   2e-25
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...   122   2e-25
emb|CBI35661.3| unnamed protein product [Vitis vinifera]              115   2e-23
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   112   2e-22
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   107   4e-21
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   107   4e-21
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu...   105   1e-20
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric...    99   2e-18
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l...    94   6e-17
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...    92   1e-16
gb|EPS65946.1| hypothetical protein M569_08835, partial [Genlise...    89   1e-15
ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal doma...    84   7e-14
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l...    82   2e-13
ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal doma...    82   3e-13
ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase...    76   1e-11
gb|AAB80671.1| unknown protein [Arabidopsis thaliana]                  76   1e-11
gb|AAM94371.1|AF486633_1 CTD phosphatase-like 3 [Arabidopsis tha...    76   1e-11
ref|XP_003609604.1| RNA polymerase II C-terminal domain phosphat...    75   2e-11

>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score =  122 bits (307), Expect = 1e-25
 Identities = 91/254 (35%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
 Frame = -3

Query: 750 MRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXXX 571
           ++DLYKY  A       LYNLAWAQAV NKPL D+FVM ++++                 
Sbjct: 59  LQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVMDDEESKRSSSSSNTSRDDSSSA 118

Query: 570 XXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGG-DVNE----LD 406
               K +I                           + DS  +VK+E G  DVNE    L 
Sbjct: 119 KEVAKVIIDDSGDEMDVKMDDVSEKEEGELEEGEIDLDSEPDVKDEGGVLDVNEPEIDLK 178

Query: 405 ERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKM-----VLEGSFSEKDT 241
           ERE  +RV  I+E+LES+ V +A+KS+  +CS L+ T  SLQK+     V E S   KD 
Sbjct: 179 ERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDA 238

Query: 240 LVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSS 61
           L Q L+ AI+ L  +F SM+   +E NK +  RL++ V     P+FS   ++EVE + S 
Sbjct: 239 LAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSF 298

Query: 60  LQSPADSLSNDNSN 19
           L +PA   S + S+
Sbjct: 299 LDTPAAQSSAEASD 312


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
           polymerase II C-terminal domain phosphatase-like 3-like
           [Citrus sinensis] gi|557541056|gb|ESR52100.1|
           hypothetical protein CICLE_v10030535mg [Citrus
           clementina]
          Length = 1234

 Score =  122 bits (305), Expect = 2e-25
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 19/261 (7%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TMRDLY KY    +    GL+NLAWAQAV NKPL ++FVM  +                 
Sbjct: 54  TMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD-------------- 99

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVEN---KDSNVEVKNEVG----GDV 418
                   V                         VVE     DS  E++ E G    G++
Sbjct: 100 --------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGEI 151

Query: 417 N-ELDERERSKRVNLIKEELESLNVADAKK----------SYDRLCSSLETTAVSLQKMV 271
             +L+     K    +KEE++ +NV   ++          S++ +CS LE T  SL+++V
Sbjct: 152 ELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELV 211

Query: 270 LEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQ 91
            E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQ 271

Query: 90  LEEVEAIRSSLQSPADSLSND 28
           ++E+EA+ SSL + A+    D
Sbjct: 272 IKEMEAMLSSLVTRANDKEKD 292


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|557541054|gb|ESR52098.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score =  122 bits (305), Expect = 2e-25
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 19/261 (7%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TMRDLY KY    +    GL+NLAWAQAV NKPL ++FVM  +                 
Sbjct: 54  TMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD-------------- 99

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVEN---KDSNVEVKNEVG----GDV 418
                   V                         VVE     DS  E++ E G    G++
Sbjct: 100 --------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGEI 151

Query: 417 N-ELDERERSKRVNLIKEELESLNVADAKK----------SYDRLCSSLETTAVSLQKMV 271
             +L+     K    +KEE++ +NV   ++          S++ +CS LE T  SL+++V
Sbjct: 152 ELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELV 211

Query: 270 LEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQ 91
            E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQ 271

Query: 90  LEEVEAIRSSLQSPADSLSND 28
           ++E+EA+ SSL + A+    D
Sbjct: 272 IKEMEAMLSSLVTRANDKEKD 292


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
           gi|567892677|ref|XP_006438859.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541053|gb|ESR52097.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
           gi|557541055|gb|ESR52099.1| hypothetical protein
           CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score =  122 bits (305), Expect = 2e-25
 Identities = 88/261 (33%), Positives = 132/261 (50%), Gaps = 19/261 (7%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TMRDLY KY    +    GL+NLAWAQAV NKPL ++FVM  +                 
Sbjct: 54  TMRDLYNKYPAICRGYGPGLHNLAWAQAVQNKPLNEIFVMEAEQDD-------------- 99

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVEN---KDSNVEVKNEVG----GDV 418
                   V                         VVE     DS  E++ E G    G++
Sbjct: 100 --------VSKRSSPASSVASVNSGAAAGKDDKKVVEKVVIDDSGDEIEKEEGELEEGEI 151

Query: 417 N-ELDERERSKRVNLIKEELESLNVADAKK----------SYDRLCSSLETTAVSLQKMV 271
             +L+     K    +KEE++ +NV   ++          S++ +CS LE T  SL+++V
Sbjct: 152 ELDLESESNEKVSEQVKEEMKLINVESIREALESVLRGDISFEGVCSKLEFTLESLRELV 211

Query: 270 LEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQ 91
            E +   KD L+QL  +A+Q+++S+F SM+ +L+EQNK IL RL++ + S +PPLFSS Q
Sbjct: 212 NENNVPTKDALIQLAFSAVQSVHSVFCSMNHVLKEQNKEILSRLLSVIKSHEPPLFSSNQ 271

Query: 90  LEEVEAIRSSLQSPADSLSND 28
           ++E+EA+ SSL + A+    D
Sbjct: 272 IKEMEAMLSSLVTRANDKEKD 292


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score =  115 bits (288), Expect = 2e-23
 Identities = 90/254 (35%), Positives = 125/254 (49%), Gaps = 10/254 (3%)
 Frame = -3

Query: 750 MRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXXX 571
           ++DLYKY  A       LYNLAWAQAV NKPL D+FV++ DD+                 
Sbjct: 99  LQDLYKYHQACSGYTPRLYNLAWAQAVQNKPLNDIFVII-DDSGDEMDVKMDDVSEKEEG 157

Query: 570 XXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGG-DVNE----LD 406
                 +                            + DS  +VK+E G  DVNE    L 
Sbjct: 158 ELEEGEI----------------------------DLDSEPDVKDEGGVLDVNEPEIDLK 189

Query: 405 ERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKM-----VLEGSFSEKDT 241
           ERE  +RV  I+E+LES+ V +A+KS+  +CS L+ T  SLQK+     V E S   KD 
Sbjct: 190 ERELVERVKSIQEDLESVTVIEAEKSFSGVCSRLQNTLGSLQKVFGEKVVGESSVPTKDA 249

Query: 240 LVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSS 61
           L Q L+ AI+ L  +F SM+   +E NK +  RL++ V     P+FS   ++EVE + S 
Sbjct: 250 LAQQLINAIRALNHVFCSMNSNQKELNKDVFSRLLSCVECGDSPIFSIQHIKEVEVMMSF 309

Query: 60  LQSPADSLSNDNSN 19
           L +PA   S + S+
Sbjct: 310 LDTPAAQSSAEASD 323


>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Solanum tuberosum]
          Length = 1218

 Score =  112 bits (279), Expect = 2e-22
 Identities = 87/271 (32%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
 Frame = -3

Query: 753 TMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           TMRD YKY I S+    GLYNLAWAQAV NKPL ++FVM  D++                
Sbjct: 60  TMRDAYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA------------ 106

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVN------- 415
                                               N ++NVE K  +  DV+       
Sbjct: 107 ------------------------------------NANANVESKVIIDVDVDDDAKEEG 130

Query: 414 ELDERERS-----------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVL 268
           EL+E E             K  N ++E+L+S+ + +  KS+  +CS L+T+ ++L ++ L
Sbjct: 131 ELEEGEIDLDAADLVLNFGKEANFVREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL 190

Query: 267 EGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQL 88
             S  + D L+QL +TA++T+ S+F SM+   ++QN  IL RL+    +  P L SS QL
Sbjct: 191 --SQDKNDILIQLFMTALRTINSVFYSMNQDQKQQNTDILSRLLFHAKTQLPALLSSEQL 248

Query: 87  EEVEAIRSSLQSPA---DSLSNDNSNGRKQV 4
           +EV+A+  S+   A   ++  ND  NG K V
Sbjct: 249 KEVDAVILSINQSAVFSNTQDNDKVNGIKVV 279


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Solanum lycopersicum]
          Length = 1211

 Score =  107 bits (267), Expect = 4e-21
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
 Frame = -3

Query: 753 TMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           TMRD+YKY I S+    GLYNLAWAQAV NKPL ++FVM  D++                
Sbjct: 63  TMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA------------ 109

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERER 394
                                               N +S V +  +V  D  E  E E 
Sbjct: 110 ------------------------------------NGESKVIIDVDVDDDAKEEGELEE 133

Query: 393 S--------------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSF 256
                          K  N I+E+L+S+ + +  KS+  +CS L+T+ ++L ++ L  S 
Sbjct: 134 GEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL--SQ 191

Query: 255 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVE 76
            + D L+QL +TA++T+ S+F SM+   ++QN  IL RL+    +  P L SS QL+E++
Sbjct: 192 DKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELD 251

Query: 75  AIRSSLQS---PADSLSNDNSNG 16
           A+  S+      +++  ND  NG
Sbjct: 252 ALILSINHSLVSSNTQDNDTVNG 274


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  107 bits (267), Expect = 4e-21
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 17/263 (6%)
 Frame = -3

Query: 753 TMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           TMRD+YKY I S+    GLYNLAWAQAV NKPL ++FVM  D++                
Sbjct: 63  TMRDVYKYPI-SRDYARGLYNLAWAQAVQNKPLDELFVMTSDNSNQCA------------ 109

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERER 394
                                               N +S V +  +V  D  E  E E 
Sbjct: 110 ------------------------------------NGESKVIIDVDVDDDAKEEGELEE 133

Query: 393 S--------------KRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSF 256
                          K  N I+E+L+S+ + +  KS+  +CS L+T+ ++L ++ L  S 
Sbjct: 134 GEIDLDSADLVVNFGKEANFIREQLQSVTLDETHKSFSMVCSKLQTSLLALGELAL--SQ 191

Query: 255 SEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVE 76
            + D L+QL +TA++T+ S+F SM+   ++QN  IL RL+    +  P L SS QL+E++
Sbjct: 192 DKNDILIQLFMTALRTINSVFYSMNDHQKQQNTDILSRLLFNAKTQLPALLSSEQLKELD 251

Query: 75  AIRSSLQS---PADSLSNDNSNG 16
           A+  S+      +++  ND  NG
Sbjct: 252 ALILSINHSLVSSNTQDNDTVNG 274


>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
           gi|550343308|gb|EEE79627.2| hypothetical protein
           POPTR_0003s16280g [Populus trichocarpa]
          Length = 1247

 Score =  105 bits (263), Expect = 1e-20
 Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 3/228 (1%)
 Frame = -3

Query: 753 TMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMME-DDTXXXXXXXXXXXXXXX 577
           T+RDLYKYQ+      SGLYNLAWAQAV NKPL ++FV +E DD+               
Sbjct: 67  TVRDLYKYQVGGGYM-SGLYNLAWAQAVQNKPLNELFVEVEVDDSSQKSSVSSVNSSKED 125

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERE 397
                   VI                          E ++  +++ +E G     +   +
Sbjct: 126 KRTV----VIDDSGDEMDVVKVIDIEKEEG------ELEEGEIDLDSE-GKSEGGMVSVD 174

Query: 396 RSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVL--EGSFSEKDTLVQLLL 223
             KRV  I+E+LES++V    KS++ +C  L     SL+++V   E  F  KD+LV+LL 
Sbjct: 175 TEKRVKSIREDLESVSVIKDDKSFEAVCLKLHNALESLKELVRVNENGFPSKDSLVRLLF 234

Query: 222 TAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEV 79
           TAI  + S FSSM+  L+EQNK + +R ++ V S  P  FS    +EV
Sbjct: 235 TAIGAVNSFFSSMNQKLKEQNKGVFMRFLSLVNSHDPSFFSPEHTKEV 282


>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
           gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
           3 [Populus trichocarpa]
          Length = 1190

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 74/228 (32%), Positives = 113/228 (49%), Gaps = 3/228 (1%)
 Frame = -3

Query: 753 TMRDLYKYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           T+RDLYKYQ+      SGLYNLAWA+AV NKPL ++ V+++D                  
Sbjct: 60  TVRDLYKYQVGGGYM-SGLYNLAWARAVQNKPLNELTVVIDDSGDEMD------------ 106

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDS-NVEVKNEVGGDVNELDERE 397
                  V+                       +VV+++   +V+V+N             
Sbjct: 107 -------VVKVIDIEKEEGELEEGEIDLDSEPVVVQSEGMVSVDVEN------------- 146

Query: 396 RSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMV--LEGSFSEKDTLVQLLL 223
              RV  I+++LES++V + +KS++ +C  L     SL+++V   + SF  KD LVQLL 
Sbjct: 147 ---RVKSIRKDLESVSVIETEKSFEAVCLKLHKVLESLKELVGGNDNSFPSKDGLVQLLF 203

Query: 222 TAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEV 79
            AI+ + S+F SM+  L+EQNK +  R  + + S  PP FS  Q +EV
Sbjct: 204 MAIRVVNSVFCSMNKKLKEQNKGVFSRFFSLLNSHYPPFFSPGQNKEV 251


>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
           notabilis]
          Length = 1301

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 64/155 (41%), Positives = 97/155 (62%), Gaps = 4/155 (2%)
 Frame = -3

Query: 459 DSNVEVKNEVGGDVNELDER--ERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVS 286
           D N E +N VGG   E+D R  E  KRV+LI E L S+NV +A+KS++ +CS L+ T  S
Sbjct: 180 DLNCEAEN-VGG--LEVDSRRDELEKRVDLIWETLGSVNVVNAEKSFEEVCSRLQRTLES 236

Query: 285 LQKMVLEGSFS--EKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKP 112
           L+ ++ E  FS   KD ++Q+ +TAIQ + S+F SMS+  +EQ K  L RL   V +   
Sbjct: 237 LRGVLSEKEFSFPTKDVVIQMSITAIQVVNSVFCSMSVNQKEQKKETLSRLFCSVKNCGT 296

Query: 111 PLFSSLQLEEVEAIRSSLQSPADSLSNDNSNGRKQ 7
           PLFS  Q +E+E + SSL +P + L +  ++ +++
Sbjct: 297 PLFSPEQTKEIELMISSL-NPLNVLPSSGASDKEK 330


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 10/228 (4%)
 Frame = -3

Query: 702 GLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXXXXXXXKFVIXXXXXXXX 523
           GL NLAWAQAV NKP  D+ V ++ D                        VI        
Sbjct: 73  GLANLAWAQAVQNKPFNDLLVKLDSDEKSKQQQQQRSSVSSGNEKV----VIIDSGDEMD 128

Query: 522 XXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERERS----------KRVNLI 373
                            VE ++  +E + E+G D +E  + +++          KRVNL+
Sbjct: 129 -----------------VEKEEEELE-EGEIGFD-SECGDNDKAAGSVGNGVWEKRVNLL 169

Query: 372 KEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMF 193
           +E LESL + +A+KS+  +C     +  SL+ ++ E + S K+ LVQ L  A++ + S+F
Sbjct: 170 REALESLTITEAEKSFGDVCHRFLDSLESLRGVLSEINVSTKEALVQQLFNAVRAISSVF 229

Query: 192 SSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSP 49
            SMS   +EQNK +L R+++   S  P  F + QL+E+E + SS+ SP
Sbjct: 230 RSMSADQKEQNKDVLSRILSSAKS-DPSPFPAEQLKEIEVMSSSMDSP 276


>gb|EPS65946.1| hypothetical protein M569_08835, partial [Genlisea aurea]
          Length = 99

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 50/98 (51%), Positives = 69/98 (70%)
 Frame = -3

Query: 330 SYDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAI 151
           SYD+  S LE+T   L+KM    S +EKD L ++LLTAI++L+ + SSM+L  + Q  A+
Sbjct: 1   SYDKCFSFLESTVDGLRKMSSLTSLAEKDELPEVLLTAIKSLHLVLSSMALRFKAQRNAM 60

Query: 150 LLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSL 37
           LLRLV ++TSL+P LFS  QL +VEAI SS++   DSL
Sbjct: 61  LLRLVGQITSLEPNLFSPQQLRQVEAINSSIEPMVDSL 98


>ref|XP_003530482.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Glycine max]
          Length = 1261

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 72/259 (27%), Positives = 116/259 (44%), Gaps = 11/259 (4%)
 Frame = -3

Query: 750 MRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           + DLY KY    +   SGLYNLAWAQAV NKPL D+FVM  D                  
Sbjct: 68  VHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNRNSSHRLASV 127

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERER 394
                  V+                             D++ E + E    V  + + E+
Sbjct: 128 AVNPKDVVVVDVDKEEGELEEGEI--------------DADAEPEGEAESVVVAVSDSEK 173

Query: 393 SKRVNLIKEE---------LESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSFSEKDT 241
              V +   +         LE + VA+  +S+ + CS L+ T   L +++   + SEKD 
Sbjct: 174 LDDVKMDVSDSEQLGARGVLEGVTVANVVESFAQTCSKLQNT---LPEVLSRPAGSEKDD 230

Query: 240 LVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARV-TSLKPPLFSSLQLEEVEAIRS 64
           LV+L   A + +YS+F SM    +EQNK  +LRL++ V    +  LFS   ++E++ + +
Sbjct: 231 LVRLSFNATEVVYSVFCSMDSSEKEQNKDSILRLLSFVKDQQQAQLFSPEHVKEIQGMMT 290

Query: 63  SLQSPADSLSNDNSNGRKQ 7
           ++ S   +L N  + G+++
Sbjct: 291 AIDS-VGALVNSEAIGKEK 308


>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
           [Theobroma cacao]
          Length = 1290

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 52/140 (37%), Positives = 81/140 (57%)
 Frame = -3

Query: 447 EVKNEVGGDVNELDERERSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVL 268
           +V +   G+V   DE E  KR NLI+  LE + V +A+KS++ +CS L     SL+ ++L
Sbjct: 198 KVLSSEDGNVGNSDELE--KRANLIRGVLEGVTVIEAEKSFEGVCSRLHNALESLRALIL 255

Query: 267 EGSFSEKDTLVQLLLTAIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQL 88
           E S   KD L+QL   AI    S F +++   +EQN AIL RL++ V    P LF   ++
Sbjct: 256 ECSVPAKDALIQLAFGAIN---SAFVALNCNSKEQNVAILSRLLSIVKGHDPSLFPPDKM 312

Query: 87  EEVEAIRSSLQSPADSLSND 28
           +E++ +  SL SPA ++  +
Sbjct: 313 KEIDVMLISLNSPARAIDTE 332


>ref|XP_006603006.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Glycine max]
          Length = 1257

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 5/236 (2%)
 Frame = -3

Query: 750 MRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXX 574
           + DLY KY    +   SGLYNLAWAQAV NKPL D+FVM  D                  
Sbjct: 68  VHDLYSKYPTICRGYASGLYNLAWAQAVQNKPLNDIFVMEVDSDANANSNSNNSNRLASV 127

Query: 573 XXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDE--R 400
                  V+                          E +  +V V   V  D  +LD+  R
Sbjct: 128 AVNPKDVVVVDVDKEEGELEEGEIDADAEP-----EGEAESV-VAVPVVSDSEKLDDVKR 181

Query: 399 ERSKRVNL-IKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGSFSEKDTLVQLLL 223
           + S    L ++  LE + VA+  +S+ + CS L+    +L +++   + SE+D LV+L  
Sbjct: 182 DVSNSEQLGVRGVLEGVTVANVAESFAQTCSKLQN---ALPEVLSRPADSERDDLVRLSF 238

Query: 222 TAIQTLYSMFSSMSLILQEQNKAILLRLVARV-TSLKPPLFSSLQLEEVEAIRSSL 58
            A + +YS+F SM  + +EQNK  +LRL++ V    +  LFS   ++E++ + +++
Sbjct: 239 NATEVVYSVFCSMDSLKKEQNKDSILRLLSFVKDQQQAQLFSPEHIKEIQGMMTAI 294


>ref|NP_180912.2| RNA polymerase II C-terminal domain phosphatase-like 3 [Arabidopsis
           thaliana] gi|238055326|sp|Q8LL04.2|CPL3_ARATH RecName:
           Full=RNA polymerase II C-terminal domain
           phosphatase-like 3; Short=FCP-like 3; AltName:
           Full=Carboxyl-terminal phosphatase-like 3; Short=AtCPL3;
           Short=CTD phosphatase-like 3 gi|330253756|gb|AEC08850.1|
           RNA polymerase II C-terminal domain phosphatase-like 3
           [Arabidopsis thaliana]
          Length = 1241

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TM +L  +Y      + SGL NLAWA+AV NKP  +  VM  +                 
Sbjct: 81  TMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYEPRESDKIVIEDSDDEKE 140

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERE 397
                   +                        LV ++ +S V +  +   D   L ER+
Sbjct: 141 EGELEEGEI--------------DLVDNASDDNLVEKDTESVVLISADKVEDDRILKERD 186

Query: 396 RSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQLLLT 220
             K+V LI+  LES ++ +A+  ++ +CS +     SL+++V +   F ++DTLVQL   
Sbjct: 187 LEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLSFA 246

Query: 219 AIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAI-----RSSLQ 55
           ++QT+  +F SM+ I +E+NK  + RL+  V        S  Q  E+E +     RS++ 
Sbjct: 247 SLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSAIA 306

Query: 54  SPADSLSNDNSNGRKQ 7
             A + S +N N   Q
Sbjct: 307 VFAGTSSEENVNQMTQ 322


>gb|AAB80671.1| unknown protein [Arabidopsis thaliana]
          Length = 1066

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TM +L  +Y      + SGL NLAWA+AV NKP  +  VM  +                 
Sbjct: 58  TMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYEPRESDKIVIEDSDDEKE 117

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERE 397
                   +                        LV ++ +S V +  +   D   L ER+
Sbjct: 118 EGELEEGEI--------------DLVDNASDDNLVEKDTESVVLISADKVEDDRILKERD 163

Query: 396 RSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQLLLT 220
             K+V LI+  LES ++ +A+  ++ +CS +     SL+++V +   F ++DTLVQL   
Sbjct: 164 LEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLSFA 223

Query: 219 AIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAI-----RSSLQ 55
           ++QT+  +F SM+ I +E+NK  + RL+  V        S  Q  E+E +     RS++ 
Sbjct: 224 SLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSAIA 283

Query: 54  SPADSLSNDNSNGRKQ 7
             A + S +N N   Q
Sbjct: 284 VFAGTSSEENVNQMTQ 299


>gb|AAM94371.1|AF486633_1 CTD phosphatase-like 3 [Arabidopsis thaliana]
          Length = 1241

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
 Frame = -3

Query: 753 TMRDLY-KYQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXX 577
           TM +L  +Y      + SGL NLAWA+AV NKP  +  VM  +                 
Sbjct: 81  TMEELISQYPAYRPYANSGLSNLAWARAVQNKPFNEGLVMDYEPRESDKIVIEDSDDEKE 140

Query: 576 XXXXXXKFVIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERE 397
                   +                        LV ++ +S V +  +   D   L ER+
Sbjct: 141 EGELEEGEI--------------DLVDNASDDNLVEKDTESVVLISADKVEDDRILKERD 186

Query: 396 RSKRVNLIKEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEGS-FSEKDTLVQLLLT 220
             K+V LI+  LES ++ +A+  ++ +CS +     SL+++V +   F ++DTLVQL   
Sbjct: 187 LEKKVKLIRGVLESTSLVEAQTGFEGVCSRILGALESLRELVSDNDDFPKRDTLVQLSFA 246

Query: 219 AIQTLYSMFSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAI-----RSSLQ 55
           ++QT+  +F SM+ I +E+NK  + RL+  V        S  Q  E+E +     RS++ 
Sbjct: 247 SLQTINYVFCSMNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETMNQDLSRSAIA 306

Query: 54  SPADSLSNDNSNGRKQ 7
             A + S +N N   Q
Sbjct: 307 VFAGTSSEENVNQMTQ 322


>ref|XP_003609604.1| RNA polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula] gi|355510659|gb|AES91801.1| RNA
           polymerase II C-terminal domain phosphatase-like protein
           [Medicago truncatula]
          Length = 1064

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 1/235 (0%)
 Frame = -3

Query: 732 YQIASKTSYSGLYNLAWAQAVNNKPLGDVFVMMEDDTXXXXXXXXXXXXXXXXXXXXXKF 553
           Y      S  GLYNLAWAQAV NKPL D+F M  D                       K 
Sbjct: 65  YSSCYYASGGGLYNLAWAQAVQNKPLNDIFAMEIDKDTDVNVTSNTNSNNNDDLNKPLKE 124

Query: 552 VIXXXXXXXXXXXXXXXXXXXXXXXLVVENKDSNVEVKNEVGGDVNELDERERSKRVNLI 373
           VI                        +  + D+N  +   VGG   +  E      V  +
Sbjct: 125 VIFVDDDDKEEGELEEGE--------IDVDDDTNCAI---VGG--GDSFENVSESDVIGV 171

Query: 372 KEELESLNVADAKKSYDRLCSSLETTAVSLQKMVLEG-SFSEKDTLVQLLLTAIQTLYSM 196
           ++ L+ ++VA+  +S+   C+ +++   +LQ  V  G + SEKD LV LL  A++ +YS+
Sbjct: 172 RDVLKCISVANVSESFAETCTRIQS---ALQSKVFSGIAGSEKDDLVCLLFNAVEVVYSV 228

Query: 195 FSSMSLILQEQNKAILLRLVARVTSLKPPLFSSLQLEEVEAIRSSLQSPADSLSN 31
             SM    +E+NK  +LRL++ + + +  LF+   ++E+ A+ + +    +S +N
Sbjct: 229 LFSMDNFQKEENKDNILRLLSFLKNERAHLFTPEHMKEIHAMITLVDVSGNSEAN 283