BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011947
         (625 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300...   306   3e-81
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...   306   4e-81
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   304   2e-80
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]                 303   3e-80
gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus pe...   303   3e-80
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   301   1e-79
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe...   301   1e-79
emb|CAN71970.1| hypothetical protein VITISV_007365 [Vitis vinifera]   293   4e-77
gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]   292   6e-77
gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobrom...   292   6e-77
gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobrom...   292   6e-77
gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial ...   292   6e-77
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]             291   1e-76
gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao]   290   3e-76
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   290   3e-76
gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus pe...   289   4e-76
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              289   4e-76
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   289   5e-76
emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]   288   9e-76
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa...   287   1e-75

>ref|XP_004309164.1| PREDICTED: uncharacterized protein LOC101300012 [Fragaria vesca
            subsp. vesca]
          Length = 1034

 Score =  306 bits (784), Expect = 3e-81
 Identities = 140/206 (67%), Positives = 173/206 (83%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKIT++Y FPIP+L+D+LD LGG+ VFSK+DL+SGYHQIRI+ GDEWKTAF
Sbjct: 714  RMCVDSRAINKITIKYRFPIPQLEDMLDVLGGSVVFSKIDLRSGYHQIRIKLGDEWKTAF 773

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            K+++GL+EWLVMPFGLSNAPSTFMR+MNQ L+P IG+CVVVYFDDIL+YSKS  +HL HL
Sbjct: 774  KSKDGLYEWLVMPFGLSNAPSTFMRVMNQVLKPYIGTCVVVYFDDILIYSKSKEEHLQHL 833

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            R VL +L+    Y    KC F+T+ +LFLGY VS+ GI VD  K+ AIQ+WP P T+ +V
Sbjct: 834  RKVLEVLQENKLYVNLKKCSFMTKKLLFLGYVVSSEGINVDQDKVKAIQEWPTPKTVGDV 893

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLA+FYR F+P+FS I APIT+
Sbjct: 894  RSFHGLATFYRHFVPNFSAITAPITE 919


>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  306 bits (783), Expect = 4e-81
 Identities = 144/206 (69%), Positives = 169/206 (82%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKITV+Y FPIPRL+D+LD L G+ VFSK+DL+SGYHQIRIRPGDEWKTAF
Sbjct: 677  RMCVDSRAINKITVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAF 736

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            K+++GLFEWLVMPFGLSN PSTFMR+MNQ LRP IGS VVVYFDDIL+YS +  +HL HL
Sbjct: 737  KSKDGLFEWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHL 796

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            R VL +LR    +    KC F T  +LFLG+ V   GI VDD KI AI DWP P T++EV
Sbjct: 797  RQVLDVLRENKLFVNLKKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSEV 856

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLA+FYRRF+ HFS+I+APIT+
Sbjct: 857  RSFHGLATFYRRFVRHFSSIVAPITE 882


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  304 bits (778), Expect = 2e-80
 Identities = 139/205 (67%), Positives = 169/205 (82%)
 Frame = -3

Query: 620 MCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFK 441
           MCVDSRA+NKITV+Y FPIPRLDD+LD + GAT+FSK+DLKSGYHQIRIRPGDEWKTAFK
Sbjct: 1   MCVDSRAINKITVKYRFPIPRLDDMLDMMSGATIFSKIDLKSGYHQIRIRPGDEWKTAFK 60

Query: 440 TREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLR 261
           T++GL+EW+VMPFGL+NAPSTFMR+M Q LRP +G  +VVYFDDIL+YSKS+  H+ HL 
Sbjct: 61  TKDGLYEWMVMPFGLTNAPSTFMRVMTQVLRPFMGKFLVVYFDDILIYSKSLEHHIDHLS 120

Query: 260 AVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVR 81
            V   LR E  +A P KCVF+T+ V+FLG+ VS+ G+  D  K+ AI +WP P ++ +VR
Sbjct: 121 QVCLTLRKEKLFANPKKCVFMTDQVIFLGFVVSSQGVSADPQKVQAIVEWPEPRSIRDVR 180

Query: 80  SFHGLASFYRRFIPHFSTIMAPITD 6
           SFHGLA+FYRRFI  FS IMAPITD
Sbjct: 181 SFHGLATFYRRFIKEFSVIMAPITD 205


>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
          Length = 1518

 Score =  303 bits (776), Expect = 3e-80
 Identities = 140/206 (67%), Positives = 165/206 (80%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMC DSRA+N ITV+Y FPIPRLDD+LD+L GA++FSK+DL+ GYHQ+RIR GDEWKTAF
Sbjct: 667  RMCTDSRAINNITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAF 726

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT+ GL+EWLVMPFGLSNAPSTFMR+M + LRP +G   VVYFDDILVYSK+  +HL HL
Sbjct: 727  KTKHGLYEWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTKGEHLKHL 786

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
              V  ILR +  Y    KC F+ E V FLGY +S  GI VD   IAA+Q WP PTT+TEV
Sbjct: 787  EVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQENIAAMQSWPTPTTVTEV 846

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLASFYRRFI +FST++APIT+
Sbjct: 847  RSFHGLASFYRRFIKNFSTVVAPITE 872


>gb|EMJ21939.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
          Length = 1457

 Score =  303 bits (775), Expect = 3e-80
 Identities = 144/206 (69%), Positives = 167/206 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKITV+  FPIPRL+D+LD L G+ VFSK+DL+SGYHQIRIRPGDEWKTAF
Sbjct: 667  RMCVDSRAINKITVKSRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAF 726

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            K+++GLFEWLVMPFGLSNAPSTFMR+MNQ LRP IGS VVVYFDDIL+YS +  +HL HL
Sbjct: 727  KSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHL 786

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            R VL +LR    Y    KC F T  +LFLG+ V   GI VDD KI AI DWP P  ++EV
Sbjct: 787  RQVLDVLRENKLYMNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPTPKIVSEV 846

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLA+FYRRF+ HFS+I APIT+
Sbjct: 847  RSFHGLATFYRRFVRHFSSITAPITE 872


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  301 bits (771), Expect = 1e-79
 Identities = 139/206 (67%), Positives = 171/206 (83%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKIT++Y FPIPRLDD+LD + G+ +FSK+DL+SGYHQIRIRPGDEWKT+F
Sbjct: 674  RMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRIRPGDEWKTSF 733

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT++GL+EWLVMPFGL+NAPSTFMRIM Q L+P IG  VVVYFDDIL+YS+S  DH  HL
Sbjct: 734  KTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCEDHEEHL 793

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            + V+  LR E FY    KC F++ +V+FLG+ VS+ G+  D  KI AI DWPVPT + EV
Sbjct: 794  KQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEV 853

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHG+A+FYRRFI +FS+IMAPIT+
Sbjct: 854  RSFHGMATFYRRFIRNFSSIMAPITE 879


>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  301 bits (770), Expect = 1e-79
 Identities = 143/206 (69%), Positives = 166/206 (80%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKI V+Y F IPRL+D+LD L G+ VFSK+DL+SGYHQIRIRPGDEWKTAF
Sbjct: 685  RMCVDSRAVNKIKVKYRFSIPRLEDILDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAF 744

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            K+++GLFEWLVMPFGLSNAPSTFMR+MNQ LRP IGS VVVYFDDIL+YS +  +HL HL
Sbjct: 745  KSKDGLFEWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEEHLVHL 804

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            R VL +LR    Y    KC F T  +LFLG+ V   GI VDD KI AI DWP P T++EV
Sbjct: 805  RQVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSEV 864

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLA+FY RF+ HFS+I APIT+
Sbjct: 865  RSFHGLATFYMRFVRHFSSIAAPITE 890


>emb|CAN71970.1| hypothetical protein VITISV_007365 [Vitis vinifera]
          Length = 276

 Score =  293 bits (749), Expect = 4e-77
 Identities = 137/205 (66%), Positives = 166/205 (80%)
 Frame = -3

Query: 620 MCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFK 441
           MCVDSRA+NKIT++Y FPIPRLDD+LD + G+  FSK+DL+SGYHQIRIRPGDEWKT FK
Sbjct: 1   MCVDSRAINKITIKYRFPIPRLDDMLDMMVGSXXFSKIDLRSGYHQIRIRPGDEWKTXFK 60

Query: 440 TREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLR 261
           T +GL+ WLVMPFGL+NAPSTFMRIM Q L+P IG  VVVYFDDIL+YS+S  DH  HL+
Sbjct: 61  TXDGLYXWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCKDHEEHLK 120

Query: 260 AVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVR 81
            V+  LR E FY    KC F++ +V+FLG+ VS+ G+  D  KI AI DWPVPT + EVR
Sbjct: 121 QVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEVR 180

Query: 80  SFHGLASFYRRFIPHFSTIMAPITD 6
           SFHG+A+FYRRFI +FS+IMAPIT+
Sbjct: 181 SFHGMATFYRRFIRNFSSIMAPITE 205


>gb|EOY26248.1| Uncharacterized protein TCM_046829 [Theobroma cacao]
          Length = 672

 Score =  292 bits (747), Expect = 6e-77
 Identities = 139/206 (67%), Positives = 167/206 (81%)
 Frame = -3

Query: 623 RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
           RMCVDSRA+NKIT++Y FPIPRLD++LDQL G+ VFSK+DLKSGYHQIR+R GDEWKTAF
Sbjct: 54  RMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAF 113

Query: 443 KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
           KT +GLFEWLVMPFGLSNAPSTFMR+M + L+P + S VVVYFDDIL+YS +   HL HL
Sbjct: 114 KTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHL 173

Query: 263 RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
           R VL +L+ E  Y    KC F+   V+FLG+ VSA G+  D  KI AI +WP PT++ EV
Sbjct: 174 RQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEV 233

Query: 83  RSFHGLASFYRRFIPHFSTIMAPITD 6
           RSFHGLASFYRRFI +FS+IM+PIT+
Sbjct: 234 RSFHGLASFYRRFIRNFSSIMSPITE 259


>gb|EOY01158.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 786

 Score =  292 bits (747), Expect = 6e-77
 Identities = 139/206 (67%), Positives = 167/206 (81%)
 Frame = -3

Query: 623 RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
           RMCVDSRA+NKIT++Y FPIPRLD++LDQL G+ VFSK+DLKSGYHQIR+R GDEWKTAF
Sbjct: 44  RMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAF 103

Query: 443 KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
           KT +GLFEWLVMPFGLSNAPSTFMR+M + L+P + S VVVYFDDIL+YS +   HL HL
Sbjct: 104 KTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHL 163

Query: 263 RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
           R VL +L+ E  Y    KC F+   V+FLG+ VSA G+  D  KI AI +WP PT++ EV
Sbjct: 164 RQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEV 223

Query: 83  RSFHGLASFYRRFIPHFSTIMAPITD 6
           RSFHGLASFYRRFI +FS+IM+PIT+
Sbjct: 224 RSFHGLASFYRRFIRNFSSIMSPITE 249


>gb|EOX95569.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1452

 Score =  292 bits (747), Expect = 6e-77
 Identities = 139/206 (67%), Positives = 167/206 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKIT++Y FPIPRLD++LDQL G+ VFSK+DLKSGYHQIR+R GDEWKTAF
Sbjct: 592  RMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAF 651

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT +GLFEWLVMPFGLSNAPSTFMR+M + L+P + S VVVYFDDIL+YS +   HL HL
Sbjct: 652  KTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHL 711

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            R VL +L+ E  Y    KC F+   V+FLG+ VSA G+  D  KI AI +WP PT++ EV
Sbjct: 712  RQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEV 771

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHGLASFYRRFI +FS+IM+PIT+
Sbjct: 772  RSFHGLASFYRRFIRNFSSIMSPITE 797


>gb|EOX94045.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
          Length = 624

 Score =  292 bits (747), Expect = 6e-77
 Identities = 139/206 (67%), Positives = 167/206 (81%)
 Frame = -3

Query: 623 RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
           RMCVDSRA+NKIT++Y FPIPRLD++LDQL G+ VFSK+DLKSGYHQIR+R GDEWKTAF
Sbjct: 44  RMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAF 103

Query: 443 KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
           KT +GLFEWLVMPFGLSNAPSTFMR+M + L+P + S VVVYFDDIL+YS +   HL HL
Sbjct: 104 KTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKHL 163

Query: 263 RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
           R VL +L+ E  Y    KC F+   V+FLG+ VSA G+  D  KI AI +WP PT++ EV
Sbjct: 164 RQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEV 223

Query: 83  RSFHGLASFYRRFIPHFSTIMAPITD 6
           RSFHGLASFYRRFI +FS+IM+PIT+
Sbjct: 224 RSFHGLASFYRRFIRNFSSIMSPITE 249


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score =  291 bits (745), Expect = 1e-76
 Identities = 134/207 (64%), Positives = 169/207 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMC D RA++ IT++Y  PIPRLDDLLD+L GA +FSK+DLKSGYHQIRIR GDEWKTAF
Sbjct: 659  RMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRIREGDEWKTAF 718

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT+ GL+EW+VMPFGL+NAPSTFMR+MN  LR  +G  VVVYFDDIL+YSK++ DH  HL
Sbjct: 719  KTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYSKNLDDHCIHL 778

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            +AVL +LR E  YA   KCVF T++V+FLG+ VS+ G+ VD+ K+ AI++WP P  ++EV
Sbjct: 779  KAVLQVLRYENLYANLEKCVFCTDHVIFLGFIVSSKGVHVDEEKVKAIREWPPPKNVSEV 838

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITDL 3
            RSFHGLASFYRRF+  FST+ AP+ ++
Sbjct: 839  RSFHGLASFYRRFVKDFSTLAAPLNEI 865


>gb|EOY16836.1| Uncharacterized protein TCM_035724 [Theobroma cacao]
          Length = 475

 Score =  290 bits (741), Expect = 3e-76
 Identities = 138/206 (66%), Positives = 167/206 (81%)
 Frame = -3

Query: 623 RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
           RMCVDSRA+NKIT++Y FPIPRLD++LDQL G+ VFSK+DLKSGYHQIR+R GDEWKTAF
Sbjct: 201 RMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKIDLKSGYHQIRMRDGDEWKTAF 260

Query: 443 KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
           KT +GLFEWLVMPFGLSNAPSTFMR+M + L+P + S VVVYFDDIL+YS +   HL +L
Sbjct: 261 KTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYSHTKEKHLKYL 320

Query: 263 RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
           R VL +L+ E  Y    KC F+   V+FLG+ VSA G+  D  KI AI +WP PT++ EV
Sbjct: 321 RQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRAISEWPAPTSIKEV 380

Query: 83  RSFHGLASFYRRFIPHFSTIMAPITD 6
           RSFHGLASFYRRFI +FS+IM+PIT+
Sbjct: 381 RSFHGLASFYRRFIRNFSSIMSPITE 406


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  290 bits (741), Expect = 3e-76
 Identities = 133/207 (64%), Positives = 169/207 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMC D RA+N +TV+Y  PIPRLDD+LD+L G+++FSK+DLKSGYHQIR+  GDEWKTAF
Sbjct: 470  RMCFDCRAINNVTVKYCHPIPRLDDMLDELHGSSIFSKIDLKSGYHQIRMNEGDEWKTAF 529

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT+ GL+EWLVMPFGL++APSTFMR+MN  LR  IG  V+VYFDDILVYS+S+ +H+ HL
Sbjct: 530  KTKHGLYEWLVMPFGLTHAPSTFMRLMNHVLRAFIGIFVIVYFDDILVYSESLREHIEHL 589

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
             +VL++LR E  YA   KC F T+N++FLG+ VSA G+ VD+ K+ AI+DWP P T+ EV
Sbjct: 590  DSVLNVLRKEELYANLKKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGEV 649

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITDL 3
            RSFHGLA FYRRF   FSTI+AP+T++
Sbjct: 650  RSFHGLAGFYRRFFKDFSTIVAPLTEV 676


>gb|EMJ08022.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
          Length = 1274

 Score =  289 bits (740), Expect = 4e-76
 Identities = 138/205 (67%), Positives = 160/205 (78%)
 Frame = -3

Query: 620  MCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAFK 441
            MCVDS A+NKI V+Y FPIPRL+D+LD L G+  FSK+DL+SGYHQI IR GDEWKTAFK
Sbjct: 412  MCVDSCAVNKIIVKYRFPIPRLEDMLDDLAGSQWFSKIDLRSGYHQISIREGDEWKTAFK 471

Query: 440  TREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHLR 261
            T +GL+EWLVMPFG+SNAPSTFMR+M   LRP IG  +VVYFDDIL+YS+S  +H+ HLR
Sbjct: 472  TPDGLYEWLVMPFGMSNAPSTFMRVMTHVLRPYIGKFLVVYFDDILIYSRSREEHIQHLR 531

Query: 260  AVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEVR 81
             + S LR E  YA   KC FL   VLFLG+ +SA G+  D AK+ AI +WP PTTLTE R
Sbjct: 532  TIFSTLRKEKLYANLKKCSFLQPQVLFLGFNISAAGVSTDPAKVEAIINWPTPTTLTEAR 591

Query: 80   SFHGLASFYRRFIPHFSTIMAPITD 6
            SFHGL SFYRRFIP FS IMA ITD
Sbjct: 592  SFHGLTSFYRRFIPGFSIIMALITD 616


>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  289 bits (740), Expect = 4e-76
 Identities = 133/207 (64%), Positives = 169/207 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVD RA+N ITV+Y  PIPRLDD+LD+L G+++FSK+DLKSGYHQIR++ GDEWKTAF
Sbjct: 961  RMCVDCRAINNITVKYRHPIPRLDDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAF 1020

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT +GL+EWLVMPFGL+NAPSTFMR+MN  LR  IG  V+VYFDDILVYSKS+ +H+ HL
Sbjct: 1021 KTIQGLYEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVYFDDILVYSKSLEEHVEHL 1080

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            + VL +LR E  YA   KC F T+N++FLG+ VS  G+ VD+ K+ AI++WP P ++ EV
Sbjct: 1081 KMVLEVLRKEKLYANLKKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGEV 1140

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITDL 3
            RSFHGLA FYRRF+  FST+ AP+T++
Sbjct: 1141 RSFHGLAGFYRRFVKDFSTLAAPLTEV 1167


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  289 bits (739), Expect = 5e-76
 Identities = 136/207 (65%), Positives = 164/207 (79%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVD RA+N ITV+Y +PIPRLDD+LD+L GA +FSK+DL+ GYHQIR++ GDEWKTAF
Sbjct: 712  RMCVDCRAINNITVKYRYPIPRLDDMLDELHGAKIFSKIDLRRGYHQIRMQKGDEWKTAF 771

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT+ GL+EWLVMPFGL+NAPSTFMR+MN  LR  IG  VVVYFDDIL+YSK    H+ HL
Sbjct: 772  KTKNGLYEWLVMPFGLTNAPSTFMRLMNHVLRNFIGKFVVVYFDDILIYSKDPQKHIIHL 831

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            + V  +LR E  YA   KC F  E+V+FLG+ VS+ GI VD+ KI AI+DWP P T T+V
Sbjct: 832  KEVFLVLRREQLYANLEKCYFGVESVVFLGFIVSSKGIEVDETKIQAIRDWPTPKTATKV 891

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITDL 3
            RSFHGLASFYRRF+  FSTI AP+ +L
Sbjct: 892  RSFHGLASFYRRFVKDFSTIAAPLNEL 918


>emb|CAN80487.1| hypothetical protein VITISV_043198 [Vitis vinifera]
          Length = 1499

 Score =  288 bits (737), Expect = 9e-76
 Identities = 134/206 (65%), Positives = 167/206 (81%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVDSRA+NKIT++Y FPIPRLDD+LD + G+ +FSK+DL+SGYHQI IR GDEWKT+F
Sbjct: 607  RMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQICIRSGDEWKTSF 666

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT++GL+EWLVMPFGL+NAPSTFMR M Q L+P IG  VVVYFDDIL+YS+S  DH  HL
Sbjct: 667  KTKDGLYEWLVMPFGLTNAPSTFMRSMTQVLKPFIGWFVVVYFDDILIYSRSCEDHEEHL 726

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            + V+  LR + FY    KC F++ +V+FLG+ VS+ G+  D  KI AI DWPVPT + EV
Sbjct: 727  KQVMRTLRAKKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAIVDWPVPTNIHEV 786

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITD 6
            RSFHG+A+FYRRFI +FS+IMAPI +
Sbjct: 787  RSFHGMATFYRRFIRNFSSIMAPIIE 812


>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|15217296|gb|AAK92640.1|AC079634_1 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431373|gb|AAP53161.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1708

 Score =  287 bits (735), Expect = 1e-75
 Identities = 136/207 (65%), Positives = 163/207 (78%)
 Frame = -3

Query: 623  RMCVDSRALNKITVRYSFPIPRLDDLLDQLGGATVFSKLDLKSGYHQIRIRPGDEWKTAF 444
            RMCVD RA+N IT+RY  PIPRLDD+LD+L G+ VFSK+DL+SGYHQIR++ GDEWKTAF
Sbjct: 797  RMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAF 856

Query: 443  KTREGLFEWLVMPFGLSNAPSTFMRIMNQTLRPLIGSCVVVYFDDILVYSKSVHDHLAHL 264
            KT+ GL+EWLVMPFGL+NAPSTF+R+MN+ LR  IG  VVVYFDDIL+YS+S+ DH  HL
Sbjct: 857  KTKFGLYEWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIEDHHGHL 916

Query: 263  RAVLSILRTECFYAAPSKCVFLTENVLFLGYRVSATGIGVDDAKIAAIQDWPVPTTLTEV 84
            RAV   LR E  +    KC F T+ V FLGY V+  GI VD AK+ AI  WPVPTT+T+V
Sbjct: 917  RAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQV 976

Query: 83   RSFHGLASFYRRFIPHFSTIMAPITDL 3
            RSF GLA FYRRF+  FSTI AP+ +L
Sbjct: 977  RSFLGLAGFYRRFVKDFSTIAAPLHEL 1003