BLASTX nr result
ID: Rehmannia23_contig00011853
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00011853
(654 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 192 9e-47
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 187 2e-45
gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposo... 183 4e-44
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 178 1e-42
gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis] 169 9e-40
dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsi... 166 4e-39
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 166 7e-39
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 165 1e-38
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 165 1e-38
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 164 2e-38
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 164 2e-38
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 164 3e-38
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 163 4e-38
gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsi... 163 4e-38
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 162 6e-38
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 162 6e-38
gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group... 162 6e-38
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 162 8e-38
ref|XP_006388326.1| hypothetical protein POPTR_0228s002002g, par... 161 1e-37
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group] 161 1e-37
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 192 bits (487), Expect = 9e-47
Identities = 93/155 (60%), Positives = 113/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY++ SL LKF K+G + GYVDS+Y D D R STT Y+FTL G VSWKSQLQ
Sbjct: 598 RYVRGSLGVGLKFGSSKEGDGITGYVDSDYVGDLDKRXSTTGYIFTLFGGPVSWKSQLQS 657
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
+VALSTT++EYIA TEA KEA+WL+GL+ EL L+ V +F DSQS IQLC NP FH RT
Sbjct: 658 IVALSTTKAEYIAATEAMKEALWLQGLVKELXVLNSVVEIFLDSQSAIQLCNNPXFHXRT 717
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDVR+H+IR+ ++ G + LEKI NPADM T
Sbjct: 718 KHIDVRYHFIRETISSGAMKLEKISXVDNPADMAT 752
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 187 bits (475), Expect = 2e-45
Identities = 91/155 (58%), Positives = 114/155 (73%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY++ SL LKF K+G + GYVD +YA D D R+STTSY+FTL G V+WKSQLQ
Sbjct: 1673 RYVRGSLGVGLKFGVSKEGASIIGYVDLDYAGDLDKRRSTTSYIFTLFGGPVNWKSQLQS 1732
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
+VALST E EYI T+A KE +WL+GL+ ELG L+ V +FSDSQS IQLCKN VFH+RT
Sbjct: 1733 IVALSTXEVEYITTTKAMKETLWLQGLVKELGVLNSVVEIFSDSQSTIQLCKNXVFHERT 1792
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KH++VR+H+IR+IV+ + LEKI NP DM T
Sbjct: 1793 KHVNVRYHFIREIVSSRKMKLEKISLADNPIDMAT 1827
>gb|EXB73293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 1822
Score = 183 bits (464), Expect = 4e-44
Identities = 89/156 (57%), Positives = 119/156 (76%), Gaps = 1/156 (0%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCK-DGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQ 477
++++ + N L + + + DG KL+GYVD+++A D D R+S + Y+FTL G VSWK+QLQ
Sbjct: 505 KWVQGASNVGLLYKRMRNDGEKLRGYVDADFAGDLDKRRSLSGYIFTLFGCTVSWKAQLQ 564
Query: 476 HVVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDR 297
VVALSTTE+EYIA TE KEA+WLKGLI ELG + V VF D+QS I L KN +F+DR
Sbjct: 565 LVVALSTTEAEYIAATEGVKEAMWLKGLIGELGIVQDEVEVFCDNQSSILLTKNQMFYDR 624
Query: 296 TKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
TKHID++ H+IRDI+++G V LEKI ++ NPADMGT
Sbjct: 625 TKHIDIKLHFIRDIISRGTVTLEKIHTDDNPADMGT 660
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 178 bits (451), Expect = 1e-42
Identities = 94/156 (60%), Positives = 114/156 (73%), Gaps = 8/156 (5%)
Frame = -2
Query: 632 NYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTT 453
N LKF K+GV + GYVDS+YA D D R+ST Y+FTL G VSWKSQLQ +VALSTT
Sbjct: 256 NPGLKFRYSKEGVGIIGYVDSDYARDLDKRRSTIGYIFTLFGGPVSWKSQLQLIVALSTT 315
Query: 452 ESEYIAVTEA--------FKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDR 297
E++YIAVTEA KEAI L+GL+ ELG L+ V +F +SQS IQLCKN VFH+R
Sbjct: 316 EAKYIAVTEAKYIIATEAMKEAILLQGLVKELGVLNSVVEIFLNSQSAIQLCKNLVFHER 375
Query: 296 TKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
TKH+DVR+H+IR+IV+ G V LEKI + N ADM T
Sbjct: 376 TKHVDVRYHFIREIVSLGAVKLEKISTTDNSADMAT 411
>gb|EXB65256.1| hypothetical protein L484_025334 [Morus notabilis]
Length = 987
Score = 169 bits (427), Expect = 9e-40
Identities = 77/123 (62%), Positives = 101/123 (82%)
Frame = -2
Query: 557 DRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESEYIAVTEAFKEAIWLKGLISELG 378
DRD R+ST++Y+ TL G+C+SWKSQLQ VVALS+ E+EYIA T+ FKEAIW++GL+SEL
Sbjct: 102 DRDRRQSTSAYMMTLDGNCISWKSQLQLVVALSSIEAEYIAGTKGFKEAIWIQGLLSELK 161
Query: 377 FLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPAD 198
L GN ++ DSQS I LCKNP++HD+TKHIDVR H+IR+ V +G++ LEKI +E NP+D
Sbjct: 162 ILKGNTTIYLDSQSAIHLCKNPIYHDKTKHIDVRHHFIREKVEEGIIKLEKIDTEDNPSD 221
Query: 197 MGT 189
M T
Sbjct: 222 MAT 224
>dbj|BAB09923.1| copia-like retrotransposable element [Arabidopsis thaliana]
Length = 1342
Score = 166 bits (421), Expect = 4e-39
Identities = 84/155 (54%), Positives = 112/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY+K + + L+F K D +++GY DS+YA D D R+S T +VFT G+ +SWKS LQ
Sbjct: 1169 RYMKGTQDTCLRFKK-DDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQR 1227
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVALSTTE+EY+A+ EA KEAIWL+GL +E+GF V V DSQS I L KN V H+RT
Sbjct: 1228 VVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERT 1287
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDVR+H+IR+ +A G + + KI + +NPAD+ T
Sbjct: 1288 KHIDVRYHFIREKIADGEIQVVKISTTWNPADIFT 1322
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 166 bits (419), Expect = 7e-39
Identities = 84/155 (54%), Positives = 111/155 (71%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYL +++ L F K G + GY DS++A D D ++ST+ YVFTL G VSW+S LQ
Sbjct: 123 RYLYGTVDVGLLFKK-NCGQQCVGYCDSDFAGDLDKQRSTSGYVFTLGGGSVSWRSILQS 181
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
+ALSTTE+EYIA TEA KEAIWLKGL+ +LG + N+ VF D+QS I L KN +H RT
Sbjct: 182 TIALSTTEAEYIAATEAVKEAIWLKGLLGDLGVIQENIAVFCDNQSAIFLAKNQTYHART 241
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDV++HY+R+I+ G V L+KI ++ NP+DM T
Sbjct: 242 KHIDVKYHYVREIIEGGDVLLKKIDTKDNPSDMLT 276
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 165 bits (417), Expect = 1e-38
Identities = 84/152 (55%), Positives = 110/152 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYLK + + +L F K KD + GY DSNYA D D R+S + YVFT+ G+ VSWK+ LQ
Sbjct: 1182 RYLKGAQDLNLVFTKEKD-FTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQP 1240
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA+STTE+EYIA+ EA KEA+W+KGL+ ++G V ++ DSQS I L KN V+H+RT
Sbjct: 1241 VVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQSAICLSKNSVYHERT 1300
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPAD 198
KHIDVRF+YIRD+V G V++ KI + NP D
Sbjct: 1301 KHIDVRFNYIRDVVESGDVDVLKIHTSRNPVD 1332
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 165 bits (417), Expect = 1e-38
Identities = 83/155 (53%), Positives = 113/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY++ + L F K +D + L+GY DS+Y ++ D R+S T YVFT+ G+ +SWKS+LQ
Sbjct: 1162 RYMRGTEKKKLCFRKQEDFL-LRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQK 1220
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA+S+TE+EY+A+TEA KEA+WLKG +ELG V V SDSQS I L KN V H+RT
Sbjct: 1221 VVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSVHHERT 1280
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHID+R H+IRDI+ GL+ + KI +E NPA++ T
Sbjct: 1281 KHIDIRLHFIRDIICAGLIKVVKIATECNPANIFT 1315
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 164 bits (416), Expect = 2e-38
Identities = 84/155 (54%), Positives = 112/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY+K SL L++ + D K+ GY D+++A +D R+S T VFTL GS +SWKS Q
Sbjct: 1160 RYIKGSLGTKLQYKRSSD-FKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQR 1218
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVALSTTE+EY+++TEA KEA+W+KGL+ E G+ +V +F DSQS I L KN V H+RT
Sbjct: 1219 VVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHERT 1278
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDVR+ YIRDI+A G ++ KI +E NPAD+ T
Sbjct: 1279 KHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFT 1313
>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 164 bits (415), Expect = 2e-38
Identities = 84/155 (54%), Positives = 113/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYL + + L+F + +DG L GYVDS++A D D R+S T YVFT+ G VSWK+ LQ
Sbjct: 1010 RYLHGTSSACLQFGRSRDG--LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQA 1067
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VALSTTE+EY+A++EA KEAIWL+GL +EL + + +F DSQS I L K+ +FH+RT
Sbjct: 1068 TVALSTTEAEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICLTKDQMFHERT 1127
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDVR+H+IR ++A+G V + KI + NPADM T
Sbjct: 1128 KHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMT 1162
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 164 bits (414), Expect = 3e-38
Identities = 83/155 (53%), Positives = 111/155 (71%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY+K +++ L + + D + GY D++YA D D R+S T VFTL G+ +SWKS LQ
Sbjct: 1190 RYIKGTVDTRLCYKRNSD-FSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQR 1248
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA S+TE EY+++TEA KEAIWLKGL+ + G+ NV +F DSQS I L KN V H+RT
Sbjct: 1249 VVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERT 1308
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDV+FH+IR+I+A G V + KI +E NPAD+ T
Sbjct: 1309 KHIDVKFHFIREIIADGKVEVSKISTEKNPADIFT 1343
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 163 bits (413), Expect = 4e-38
Identities = 78/135 (57%), Positives = 102/135 (75%)
Frame = -2
Query: 593 KLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESEYIAVTEAFKE 414
+L+G+VD++YA + D RKS T YVFT G VSWK+ LQ VVALSTTE+EY+A+TEA KE
Sbjct: 1054 QLQGFVDADYAGNIDTRKSLTGYVFTXFGGAVSWKANLQSVVALSTTEAEYMAMTEAVKE 1113
Query: 413 AIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVN 234
AIWLKG+ EL G VVV+ D+QS I L KN FH+R+KHIDVR H++RDI+A G +
Sbjct: 1114 AIWLKGITEELAMYRGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIG 1173
Query: 233 LEKIPSEFNPADMGT 189
+ K+ ++ NP+DM T
Sbjct: 1174 VGKVHTKDNPSDMLT 1188
>gb|AAD32759.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 163 bits (413), Expect = 4e-38
Identities = 83/155 (53%), Positives = 110/155 (70%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RY+K +L L + K + GY D++YA D D R+S T VFTL G+ +SWKS LQ
Sbjct: 1183 RYIKGTLKTRLCYKK-SSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQR 1241
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA STTESEY+++TEA KEAIWLKGL+ + G+ +V +F DSQS I L KN V H+RT
Sbjct: 1242 VVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERT 1301
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDV++H+IR+I++ G V + KI +E NPAD+ T
Sbjct: 1302 KHIDVKYHFIREIISDGTVEVLKISTEKNPADIFT 1336
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 162 bits (411), Expect = 6e-38
Identities = 76/137 (55%), Positives = 101/137 (73%)
Frame = -2
Query: 599 GVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQHVVALSTTESEYIAVTEAF 420
G +L+G+VD++Y + D RKS YVFT+ G VSWK+ LQ VVALS TE+EY+A+TE
Sbjct: 579 GTQLQGFVDADYPGNIDTRKSLIGYVFTVFGGAVSWKANLQSVVALSATEAEYMAMTEVV 638
Query: 419 KEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGL 240
KE IWLKG+I EL G VVV+ D+QS I L KN FH+R+KHIDVR H++RDI+A G
Sbjct: 639 KEVIWLKGIIEELAMYKGKVVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGE 698
Query: 239 VNLEKIPSEFNPADMGT 189
+ + K+P++ NP+DM T
Sbjct: 699 IGVGKVPTKDNPSDMLT 715
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 162 bits (411), Expect = 6e-38
Identities = 81/155 (52%), Positives = 112/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYL+ + + LKF + G L GYVDS++A D D R+S T YVFT+ VSWK+ LQ
Sbjct: 122 RYLRGTTDACLKFGRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 179
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
+VA STTE+EY+A+ EA KE++WLKGL +EL +D + +F DSQS I L K+ +FH+RT
Sbjct: 180 IVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERT 239
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHID+++HY+RD+VA+G + + KI + NPADM T
Sbjct: 240 KHIDIKYHYVRDVVAQGKLKVCKISTHDNPADMMT 274
>gb|AAT01387.1| putative polyprotein [Oryza sativa Japonica Group]
gi|48475101|gb|AAT44170.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1175
Score = 162 bits (411), Expect = 6e-38
Identities = 81/155 (52%), Positives = 111/155 (71%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYL+ + N LKF + G L GYVDS++A D D R+S T YVFT+ VSWK+ L+H
Sbjct: 1004 RYLRDTANACLKFGRTNKG--LIGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLRH 1061
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA STTE+EY+A+ EA KE++WLKGL +EL + + +F DSQS I L K+ +FH+RT
Sbjct: 1062 VVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVYSCINLFCDSQSAICLTKDQMFHERT 1121
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHID+++HY+RD+VA+G + + KI + NP DM T
Sbjct: 1122 KHIDIKYHYVRDVVAQGKLKVCKISTHDNPVDMMT 1156
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 162 bits (410), Expect = 8e-38
Identities = 83/155 (53%), Positives = 111/155 (71%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYL+ + + LKF + G L GYVDS++A D D R+S T YVFT+ VSWK+ LQ
Sbjct: 1151 RYLRGTADACLKFGRIDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 1208
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VVA STTE+EY+A+ EA KE++WLKGL +EL +D + +F DSQS I L K+ +FH+RT
Sbjct: 1209 VVAQSTTEAEYMAIAEACKESVWLKGLFAELCGVDSCINLFCDSQSAICLTKDQMFHERT 1268
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHID+++HY+RDIVA+G + + KI NPADM T
Sbjct: 1269 KHIDIKYHYVRDIVAQGKLKVCKISIHDNPADMMT 1303
>ref|XP_006388326.1| hypothetical protein POPTR_0228s002002g, partial [Populus
trichocarpa] gi|550310006|gb|ERP47240.1| hypothetical
protein POPTR_0228s002002g, partial [Populus
trichocarpa]
Length = 691
Score = 161 bits (408), Expect = 1e-37
Identities = 81/155 (52%), Positives = 108/155 (69%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
RYLK S L F G+KL+G+VD++ A D D+RKSTT YV+TL G+ VSW S LQ
Sbjct: 2 RYLKGSSETCLSFTA--GGLKLEGFVDADLAGDVDSRKSTTGYVYTLGGTAVSWSSTLQK 59
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
+VALSTTE+EY+AV+E+ KE +WL+ + ELG L+G ++SDSQS I L KNP FH RT
Sbjct: 60 IVALSTTEAEYVAVSESAKEIVWLQSFLKELGKLNGKGTLYSDSQSAIFLAKNPAFHSRT 119
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHI +++H+IR ++ + LEK+ NP DM T
Sbjct: 120 KHIQIKYHFIRQLLDDEQLMLEKVCGSKNPTDMLT 154
>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1211
Score = 161 bits (408), Expect = 1e-37
Identities = 82/155 (52%), Positives = 112/155 (72%)
Frame = -2
Query: 653 RYLKHSLNYSLKFAKCKDGVKLKGYVDSNYANDRDNRKSTTSYVFTLCGSCVSWKSQLQH 474
+YL+ + + L+F + +DG L GYVDS++A D D R+S T YVFT+ G VSWK+ LQ
Sbjct: 1040 KYLRGTSSACLQFGRSRDG--LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQA 1097
Query: 473 VVALSTTESEYIAVTEAFKEAIWLKGLISELGFLDGNVVVFSDSQSGIQLCKNPVFHDRT 294
VALSTTE EY+A++EA KEAIWL+GL +EL + + +F DSQS I K+ +FH+RT
Sbjct: 1098 TVALSTTEVEYMAISEACKEAIWLRGLYTELCGVTSCINIFCDSQSAICFTKDQMFHERT 1157
Query: 293 KHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 189
KHIDVR+H+IR ++A+G V + KI + NPADM T
Sbjct: 1158 KHIDVRYHFIRGVIAEGDVKVCKISTHDNPADMMT 1192