BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00011079
         (614 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   249   2e-72
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   250   2e-72
emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]   248   2e-71
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               232   5e-66
ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660...   215   2e-63
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   206   8e-60
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   206   8e-60
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   206   8e-60
gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subc...   206   2e-59
gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subc...   206   2e-59
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   204   2e-59
gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-...   206   2e-59
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     206   2e-59
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   204   2e-59
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         206   2e-59
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        206   2e-59
gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-...   206   2e-59
gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-...   206   2e-59
gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]     206   2e-59
gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subc...   206   2e-59

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  249 bits (636), Expect(2) = 2e-72
 Identities = 117/160 (73%), Positives = 139/160 (86%)
 Frame = -2

Query: 481  TVAQMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKYTLDY 302
            +V+Q+EYSRIIGSLMY+ +CTRPD+AY V  LSR+TSNP  +H + + RVLKYL++T DY
Sbjct: 1088 SVSQVEYSRIIGSLMYLMSCTRPDIAYAVGKLSRYTSNPGAKHWQGIIRVLKYLRFTRDY 1147

Query: 301  GLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTMESEF 122
             L+Y+RYPAVLEGYSDA+WIS+ KDS S SGY+FT+GG AVSWKS+KQT IARSTMESEF
Sbjct: 1148 XLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQTVIARSTMESEF 1207

Query: 121  IALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            IALDK GEEAEWLR+FLEDIP W KPVP + IHCDSQ+AI
Sbjct: 1208 IALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAI 1247



 Score = 49.7 bits (117), Expect(2) = 2e-72
 Identities = 22/44 (50%), Positives = 34/44 (77%)
 Frame = -3

Query: 612  TPNGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANKTE 481
            T N +ILSQSHYV+K+L KF+  +S  ++TP+D++++L  NK E
Sbjct: 1044 TSNELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGE 1087


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  250 bits (638), Expect(2) = 2e-72
 Identities = 117/160 (73%), Positives = 140/160 (87%)
 Frame = -2

Query: 481  TVAQMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKYTLDY 302
            +V+Q+EYSRIIGSLMY+ +CTRPD+AY V+ LSR+TSNP  +H + + RVLKYL++T DY
Sbjct: 1049 SVSQVEYSRIIGSLMYLMSCTRPDIAYAVSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDY 1108

Query: 301  GLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTMESEF 122
            GL+Y+RYPAVLEGYSDA+WIS+ KDS S SGY+FT+GG AVSWKS+KQ  IARSTMESEF
Sbjct: 1109 GLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAVSWKSSKQXVIARSTMESEF 1168

Query: 121  IALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            IALDK GEEAEWLR+FLEDIP W KPVP + IHCDSQ+AI
Sbjct: 1169 IALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAI 1208



 Score = 48.9 bits (115), Expect(2) = 2e-72
 Identities = 21/44 (47%), Positives = 34/44 (77%)
 Frame = -3

Query: 612  TPNGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANKTE 481
            T + +ILSQSHYV+K+L KF+  +S  ++TP+D++++L  NK E
Sbjct: 1005 TSBELILSQSHYVDKILGKFDKDNSGVARTPVDVTLHLSKNKGE 1048


>emb|CAN62076.1| hypothetical protein VITISV_015538 [Vitis vinifera]
          Length = 313

 Score =  248 bits (633), Expect(2) = 2e-71
 Identities = 115/160 (71%), Positives = 139/160 (86%)
 Frame = -2

Query: 481 TVAQMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKYTLDY 302
           +V+Q+EYSR+IGSLMY+ +CTRPD+AY  + LSR+TSNP  +H + + RVLKYL++T DY
Sbjct: 85  SVSQVEYSRVIGSLMYLMSCTRPDIAYAXSKLSRYTSNPGAKHWQGIIRVLKYLRFTRDY 144

Query: 301 GLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTMESEF 122
           GL+Y+RYPAVLEGYSDA+WIS+ KDS S SGY+FT+GG A SWKS+KQT IARSTMESEF
Sbjct: 145 GLHYTRYPAVLEGYSDANWISNVKDSKSHSGYVFTLGGAAXSWKSSKQTVIARSTMESEF 204

Query: 121 IALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
           IALDK GEEAEWLR+FLEDIP W KPVP + IHCDSQ+AI
Sbjct: 205 IALDKCGEEAEWLRHFLEDIPRWSKPVPPICIHCDSQSAI 244



 Score = 47.4 bits (111), Expect(2) = 2e-71
 Identities = 21/44 (47%), Positives = 33/44 (75%)
 Frame = -3

Query: 612 TPNGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANKTE 481
           T + +ILSQSHYV+K+L KF+  +S  ++TP+D+++ L  NK E
Sbjct: 41  TSDELILSQSHYVDKILGKFDKDNSGVARTPVDVTLXLSKNKXE 84


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  232 bits (591), Expect(2) = 5e-66
 Identities = 106/158 (67%), Positives = 134/158 (84%)
 Frame = -2

Query: 475  AQMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKYTLDYGL 296
            +Q+EY+R++GSLMYI NCTRPD++  ++ LSRFTSNP+  H  A+  VL YLK++  Y L
Sbjct: 1036 SQLEYARVLGSLMYIMNCTRPDISCAISKLSRFTSNPNQTHWMAMKHVLGYLKHSQHYAL 1095

Query: 295  YYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTMESEFIA 116
            +Y++YPA++EGYSDA+WI+ S +  STSGY+FT+G GAVSWKS+KQTCIARSTMES+FIA
Sbjct: 1096 HYNKYPAMIEGYSDANWITGSNEVKSTSGYVFTLGRGAVSWKSSKQTCIARSTMESKFIA 1155

Query: 115  LDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            LDKAG+EAEWL+NFLEDIP W KPV  + IHCDSQAAI
Sbjct: 1156 LDKAGKEAEWLQNFLEDIPFWPKPVGPICIHCDSQAAI 1193



 Score = 45.8 bits (107), Expect(2) = 5e-66
 Identities = 22/44 (50%), Positives = 27/44 (61%)
 Frame = -3

Query: 612  TPNGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANKTE 481
            TP G+ LSQSHY+EK+L KF   + +  K PIDLS     N  E
Sbjct: 990  TPQGLALSQSHYIEKILDKFKYLNFNVVKIPIDLSCTFQKNVGE 1033


>ref|XP_006605017.1| PREDICTED: uncharacterized protein LOC102660537 [Glycine max]
          Length = 1533

 Score =  215 bits (547), Expect(2) = 2e-63
 Identities = 100/159 (62%), Positives = 124/159 (77%)
 Frame = -2

Query: 478 VAQMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKYTLDYG 299
           V+Q+EYSR IGSLMY    TRPD+AY V  LSRFTSNPS  H +A+ RV KYLK T+DYG
Sbjct: 245 VSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYG 304

Query: 298 LYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTMESEFI 119
           L Y+ +P+V+EGYSDASWI++ +D  STSG++F +GGGA+SW S KQTCI  STMESEF+
Sbjct: 305 LTYTGFPSVIEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQTCITNSTMESEFV 364

Query: 118 ALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
           AL  AG+EAEWLRN + +IP W KP+P + I CDSQ  +
Sbjct: 365 ALAAAGKEAEWLRNLIYEIPLWPKPIPPMSIRCDSQTTL 403



 Score = 53.9 bits (128), Expect(2) = 2e-63
 Identities = 24/40 (60%), Positives = 31/40 (77%)
 Frame = -3

Query: 606 NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
           NGI +SQSHY+EK+L+KFN  D SP  TPID ++ L+ NK
Sbjct: 202 NGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNK 241


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  206 bits (524), Expect(2) = 8e-60
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 50.8 bits (120), Expect(2) = 8e-60
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S++L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK 1072


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  206 bits (524), Expect(2) = 8e-60
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 50.8 bits (120), Expect(2) = 8e-60
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S++L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK 1072


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  206 bits (524), Expect(2) = 8e-60
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 50.8 bits (120), Expect(2) = 8e-60
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S++L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK 1072


>gb|ABA91402.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2027

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1266 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKD 1325

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1326 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1385

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1386 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1429



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1228 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1267


>gb|ABF96702.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1518

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1287 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1346

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1347 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1406

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1407 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1450



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1249 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1288


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  204 bits (520), Expect(2) = 2e-59
 Identities = 95/161 (59%), Positives = 130/161 (80%), Gaps = 2/161 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQ 11
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1231



 Score = 50.8 bits (120), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S++L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK 1072


>gb|AAR87214.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1393

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1148 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1207

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1208 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1267

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1268 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTTI 1311



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1110 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1149


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1160 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1219

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1220 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1279

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1280 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1323



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1122 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1161


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  204 bits (520), Expect(2) = 2e-59
 Identities = 95/161 (59%), Positives = 130/161 (80%), Gaps = 2/161 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQ 11
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQ 1231



 Score = 50.8 bits (120), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 28/40 (70%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S++L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLSLRKNK 1072


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1072


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1043 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1102

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1103 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1162

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1163 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1206



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1005 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1044


>gb|AAX96223.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77549882|gb|ABA92679.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 1302

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1072


>gb|AAP20858.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1302

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 1071 NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1130

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1131 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1190

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1191 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1234



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 1033 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 1072


>gb|AAT58846.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1229

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 998  NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 1057

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 1058 TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 1117

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 1118 EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1161



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606  NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
            NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 960  NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 999


>gb|ABA96419.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1095

 Score =  206 bits (524), Expect(2) = 2e-59
 Identities = 96/164 (58%), Positives = 131/164 (79%), Gaps = 2/164 (1%)
 Frame = -2

Query: 487  NRTVA--QMEYSRIIGSLMYITNCTRPDLAYPVNMLSRFTSNPSHEHRKALTRVLKYLKY 314
            N+ +A  Q+EYS+IIGSLMY+ + TRPD+++ V+ LSRFTSNP  +H +AL RV++YLK 
Sbjct: 864  NKRIARNQLEYSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKG 923

Query: 313  TLDYGLYYSRYPAVLEGYSDASWISDSKDSYSTSGYIFTIGGGAVSWKSTKQTCIARSTM 134
            T++ GL+Y+ YPAVLEGYSD++WISD  +  +TSGY+FT+GGGAVSW+S KQT + RSTM
Sbjct: 924  TVELGLHYTGYPAVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQTILTRSTM 983

Query: 133  ESEFIALDKAGEEAEWLRNFLEDIPCWRKPVPSVMIHCDSQAAI 2
            E+E  ALD A  EAEWLR+ L D+P   KPVP+++++CD+Q  I
Sbjct: 984  EAELTALDTATVEAEWLRDLLMDLPVVEKPVPAILMNCDNQTVI 1027



 Score = 49.3 bits (116), Expect(2) = 2e-59
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 606 NGIILSQSHYVEKVLKKFNAFDSSPSKTPIDLSINLVANK 487
           NGI L QSHYVEK+L +F   DS PS TP D S+ L  NK
Sbjct: 826 NGITLLQSHYVEKILNRFGYIDSKPSPTPYDPSLLLRKNK 865