BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00010635
         (902 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64710.1| putative transposase [Ipomoea tricolor]                47   8e-10
ref|XP_004980439.1| PREDICTED: replication factor A protein 1-li...    45   3e-07
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...    44   7e-06
ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    43   7e-06

>dbj|BAF64710.1| putative transposase [Ipomoea tricolor]
          Length = 517

 Score = 47.0 bits (110), Expect(2) = 8e-10
 Identities = 24/71 (33%), Positives = 40/71 (56%)
 Frame = +1

Query: 412 QGNRIHATIRKMHMEQHKKLLIEGHIYAIRDFLVTNRSEKYKACETKYKIIFHGKTHMFE 591
           +G  +H  I K  +E++  +L  G +Y+IR+FLV +    YK    KY + F+ KT + E
Sbjct: 50  EGTVLHVNIPKEFVEKYSAMLKIGQVYSIRNFLVISNFYTYKTSPHKYMLKFYYKTVVRE 109

Query: 592 MFDKSYPRLMY 624
           + D  +P  M+
Sbjct: 110 LKDIVFPSHMF 120



 Score = 43.5 bits (101), Expect(2) = 8e-10
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +2

Query: 179 MAPMFSLIKHLNKSKTSWAIKVRLVRAYQKSAFNDNTQIASLECIFHDSE 328
           MAP++ L + ++   T+ AIKVRL+R+Y+         I   ECIFHD E
Sbjct: 1   MAPLYILGRDISPMNTTSAIKVRLIRSYEVPERRGAASIKCQECIFHDKE 50


>ref|XP_004980439.1| PREDICTED: replication factor A protein 1-like [Setaria italica]
          Length = 437

 Score = 45.1 bits (105), Expect(2) = 3e-07
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
 Frame = +1

Query: 412 QGNRIHATIRKMHMEQHKKLLIEGHIYAIRDFLVTNRSEKYKACETKYKIIFHGKTHMFE 591
           +G  I A+I    +++  K ++EGH Y +R+F V+ +  K+KA  + Y I     T + E
Sbjct: 48  EGQGIMASIIDKALKKFSKSIVEGHCYCVRNFQVSKQERKFKAIPSTYTIFLTPWTIIEE 107

Query: 592 M---FDKSYPRLMYVFKDF 639
           +      S PR ++ F DF
Sbjct: 108 IHAEVSASLPRYVFSFVDF 126



 Score = 37.0 bits (84), Expect(2) = 3e-07
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +2

Query: 191 FSLIKHLNKSKTSWAIKVRLVRAYQKSAFNDNTQIASLECIFHDSE 328
           +SL+  +N ++ +W +KVR+ R +Q S  +     AS+E +  D E
Sbjct: 3   YSLLSQINPARHNWCVKVRVARMWQVSRTSKGRDFASMELVVVDEE 48


>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355484558|gb|AES65761.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 549

 Score = 44.3 bits (103), Expect(2) = 7e-06
 Identities = 24/77 (31%), Positives = 43/77 (55%)
 Frame = +1

Query: 412 QGNRIHATIRKMHMEQHKKLLIEGHIYAIRDFLVTNRSEKYKACETKYKIIFHGKTHMFE 591
           +G+RI+A++R+  + +++K L E  +++I +F V +    Y+     YKI F   T + +
Sbjct: 50  KGDRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQ 109

Query: 592 MFDKSYPRLMYVFKDFR 642
             DK  P  +YV  D R
Sbjct: 110 CDDKFVPADIYVIGDSR 126



 Score = 32.7 bits (73), Expect(2) = 7e-06
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +2

Query: 179 MAPMFSLIKHLNKSKTSWAIKVRLVRAYQKSAFNDNTQIASLECIFHDSE 328
           MAP   LI  ++ SK +W I+VR+VR +       +    SLE +  D++
Sbjct: 1   MAPKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNK 50


>ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 537

 Score = 42.7 bits (99), Expect(2) = 7e-06
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = +2

Query: 179 MAPMFSLIKHLNKSKTSWAIKVRLVRAYQKSAFNDNTQIASLECIFHDSE 328
           MA  F  I  ++ SK +W IK R+VR ++ S FN NT   S+E +  DSE
Sbjct: 1   MALTFEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSE 50



 Score = 34.3 bits (77), Expect(2) = 7e-06
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +1

Query: 412 QGNRIHATIRKMHMEQHKKLLIEGHIYAIRDFLVTNRSEKYKACETKYKIIF 567
           +G+RIHA+I+K  + + +  + EG +Y+  +  +      YK     YK+ F
Sbjct: 50  EGSRIHASIKKTLLYKFQSEIREGKVYSFENMGIAANGGSYKTTHHPYKLNF 101