BLASTX nr result

ID: Rehmannia23_contig00010560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00010560
         (308 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528454.1| PREDICTED: probable ubiquitin-conjugating en...    64   2e-08
ref|XP_004485781.1| PREDICTED: probable ubiquitin-conjugating en...    63   4e-08
ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating en...    60   3e-07
ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating en...    60   3e-07
ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein ...    59   7e-07
ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating en...    59   7e-07
ref|XP_006597438.1| PREDICTED: probable ubiquitin-conjugating en...    59   9e-07
ref|XP_003545966.1| PREDICTED: probable ubiquitin-conjugating en...    59   9e-07
gb|ESW20156.1| hypothetical protein PHAVU_006G185400g [Phaseolus...    58   1e-06
ref|XP_004294020.1| PREDICTED: probable ubiquitin-conjugating en...    57   2e-06
ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Rici...    57   2e-06
ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating en...    57   3e-06
ref|XP_003542748.2| PREDICTED: probable ubiquitin-conjugating en...    57   3e-06
gb|EMJ14869.1| hypothetical protein PRUPE_ppa001031mg [Prunus pe...    55   7e-06

>ref|XP_003528454.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Glycine
            max]
          Length = 927

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/44 (70%), Positives = 34/44 (77%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  FD EK E E  KG+STGFKIML KL+ +LVEAFSDKG DCS
Sbjct: 877  GCAFDSEKNEHENQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCS 920


>ref|XP_004485781.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Cicer
           arietinum]
          Length = 919

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = +3

Query: 3   GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDC 131
           G P   EK E E  KG+STGFKIMLTKL+ +LVEAFSDKG DC
Sbjct: 869 GAPIGVEKTEHENHKGTSTGFKIMLTKLFPKLVEAFSDKGIDC 911


>ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Solanum
            tuberosum]
          Length = 926

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F  +  +QE  KGSSTGFKIML KLY +LVEAFSDKG DCS
Sbjct: 879  GSAFQPKNQDQEPIKGSSTGFKIMLGKLYPKLVEAFSDKGIDCS 922


>ref|XP_003543046.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Glycine
            max]
          Length = 919

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 30/44 (68%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F   KAE E  KG+STGFKIML KL+ +LVEAFSDKG DCS
Sbjct: 869  GCGFGGGKAEHENQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCS 912


>ref|XP_003593574.1| Ubiquitin-conjugating enzyme family protein [Medicago truncatula]
            gi|355482622|gb|AES63825.1| Ubiquitin-conjugating enzyme
            family protein [Medicago truncatula]
          Length = 954

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/44 (65%), Positives = 32/44 (72%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G P   E+ E E  KG+STGFKIML KL  +LVEAFSDKG DCS
Sbjct: 904  GAPIGGEQIEHENQKGTSTGFKIMLAKLLPKLVEAFSDKGIDCS 947


>ref|XP_002267490.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Vitis
            vinifera] gi|297735992|emb|CBI23966.3| unnamed protein
            product [Vitis vinifera]
          Length = 944

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F+++K  +E  KGSSTGFKIML KL+ +LVEAFS +G DCS
Sbjct: 884  GCAFEHKKTAEESQKGSSTGFKIMLAKLFPKLVEAFSARGIDCS 927


>ref|XP_006597438.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like isoform
           X2 [Glycine max]
          Length = 875

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 3   GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
           G  F   K E E  KG+STGFK+ML+KL+ +LVEAFSDKG DCS
Sbjct: 825 GCAFGDGKTEHENQKGTSTGFKLMLSKLFPKLVEAFSDKGIDCS 868


>ref|XP_003545966.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like isoform
            X1 [Glycine max]
          Length = 924

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F   K E E  KG+STGFK+ML+KL+ +LVEAFSDKG DCS
Sbjct: 874  GCAFGDGKTEHENQKGTSTGFKLMLSKLFPKLVEAFSDKGIDCS 917


>gb|ESW20156.1| hypothetical protein PHAVU_006G185400g [Phaseolus vulgaris]
          Length = 928

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCSD 137
            G  F     + E PKG+STGFKIML KL+ +LVEAFSDKG DC +
Sbjct: 878  GCAFGGGNTQNENPKGTSTGFKIMLAKLFPKLVEAFSDKGIDCRE 922


>ref|XP_004294020.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Fragaria
            vesca subsp. vesca]
          Length = 929

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G   D++K + +  KGSSTGFKIML KL+ +LVE+FS KG DCS
Sbjct: 879  GCAVDFQKTDDKHSKGSSTGFKIMLAKLFQKLVESFSAKGIDCS 922


>ref|XP_002519066.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
            gi|223541729|gb|EEF43277.1| ubiquitin conjugating enzyme,
            putative [Ricinus communis]
          Length = 925

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = +3

Query: 6    YPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            YPF+    E E  KG+STGFKIML+KL+ +LVEAF+ KG DC+
Sbjct: 876  YPFECGHVEHEHQKGNSTGFKIMLSKLFPKLVEAFAAKGIDCN 918


>ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like [Solanum
            lycopersicum]
          Length = 925

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F  +  ++E  KGSSTGFKIML KLY +LVEAFS+KG DCS
Sbjct: 878  GSAFQPKNQDKEPIKGSSTGFKIMLGKLYPKLVEAFSNKGIDCS 921


>ref|XP_003542748.2| PREDICTED: probable ubiquitin-conjugating enzyme E2 24 isoform X1
            [Glycine max] gi|571498801|ref|XP_006594319.1| PREDICTED:
            probable ubiquitin-conjugating enzyme E2 24 isoform X2
            [Glycine max]
          Length = 933

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/44 (63%), Positives = 31/44 (70%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G  F   K   E  KG+STGFKIML KL+ +LVEAFSDKG DCS
Sbjct: 876  GCAFGSGKTGHENQKGTSTGFKIMLAKLFPKLVEAFSDKGIDCS 919


>gb|EMJ14869.1| hypothetical protein PRUPE_ppa001031mg [Prunus persica]
          Length = 928

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = +3

Query: 3    GYPFDYEKAEQEIPKGSSTGFKIMLTKLYSRLVEAFSDKGFDCS 134
            G   D++K + +  KGSSTGFKIML+KL+ +LVEAF D G DC+
Sbjct: 878  GCAVDFQKTDDKHCKGSSTGFKIMLSKLFPKLVEAFCDTGIDCN 921


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