BLASTX nr result

ID: Rehmannia23_contig00010246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00010246
         (546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like...    77   4e-12
gb|EOY28508.1| Transcription factor, putative [Theobroma cacao]        67   2e-09
ref|XP_006383985.1| hypothetical protein POPTR_0004s02870g [Popu...    62   9e-08
ref|XP_004232764.1| PREDICTED: uncharacterized protein LOC101268...    58   2e-06

>ref|XP_003635184.1| PREDICTED: transcription factor bHLH123-like [Vitis vinifera]
           gi|297735889|emb|CBI18658.3| unnamed protein product
           [Vitis vinifera]
          Length = 464

 Score = 76.6 bits (187), Expect = 4e-12
 Identities = 71/254 (27%), Positives = 94/254 (37%), Gaps = 75/254 (29%)
 Frame = -1

Query: 546 SAINGPGSFGWFNH--DMKXXXXXXXXXXXXXXXXXXXXIVLQKPS----------HDTI 403
           +A+N  GSFGW     D+K                       Q+P             T+
Sbjct: 31  TALNDTGSFGWPTEMVDIKARSCEESASVSDSSIVFQDIQKPQQPDSASGGGSMLMESTL 90

Query: 402 QMMGISFSS---TDDWNQNLLQDSGKSEQNYPQMLQ------------------------ 304
           QMMG   SS   T DWN  L++ SG++E NY  MLQ                        
Sbjct: 91  QMMGFGLSSSSTTTDWNPALIRGSGRAESNYHSMLQDDMSSRLNGMDSPQIQKDWSPKNF 150

Query: 303 -------------------LADEGFNSSMNNYGQNNTDDFSESINFPLNSDSYSYTSSLL 181
                                D+   +S+N+ G +       S  FP+ S SY Y S+LL
Sbjct: 151 STGGEDSSICALKPMNQGFALDQQRLNSINSSGDSTVTCQGFSSGFPMGSASYGYPSTLL 210

Query: 180 QNLFXXXXXXXXXXXTNY---LSSPNNYQMNSTDF--------------LPKQQPAANNH 52
           Q L+            N     SS  NY+ +  +               LPKQQP  N+H
Sbjct: 211 QGLYDPDPQPQQYLFDNRSMNYSSMANYRTSMNELSPSWPKYSPYMKPSLPKQQP--NSH 268

Query: 51  LQFTNNTPFWNATS 10
           L FTNNTPFWNA++
Sbjct: 269 LHFTNNTPFWNASA 282


>gb|EOY28508.1| Transcription factor, putative [Theobroma cacao]
          Length = 466

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 62/196 (31%), Positives = 86/196 (43%), Gaps = 63/196 (32%)
 Frame = -1

Query: 408 TIQMMG--ISFSSTDDWNQNLLQDSGKSEQNYPQMLQ----------------------- 304
           T+QMMG  +S S+T DWNQ+LL+ +G++E +Y  +LQ                       
Sbjct: 94  TLQMMGFGLSSSTTSDWNQSLLRSNGRTE-SYNSILQEDINSRLSCRQETGMDSSQIQKN 152

Query: 303 -----LADEGFNSSMNNYGQNNTDDFSE-------------SINFPLNSDSYSYTSS-LL 181
                 A  G +SS+  +   N  DFS              S  FP+ S SY Y S+ LL
Sbjct: 153 WSPKTYASPGEDSSITTFKPIN-QDFSVTKSGDSTPACQGLSAGFPMGSASYGYPSTVLL 211

Query: 180 QNLFXXXXXXXXXXXTN----YLSSPNNYQMNSTDF---------------LPKQQPAAN 58
           Q+LF            N    Y+S+P  Y  N+ +                LPKQQ  ++
Sbjct: 212 QSLFEPDPQPQQSLLNNRSINYMSAPATYGANANELSSPPWPKLAPCLRPSLPKQQQPSS 271

Query: 57  NHLQFTNNTPFWNATS 10
            H  F+NNTPFWNA+S
Sbjct: 272 LH--FSNNTPFWNASS 285


>ref|XP_006383985.1| hypothetical protein POPTR_0004s02870g [Populus trichocarpa]
           gi|550340195|gb|ERP61782.1| hypothetical protein
           POPTR_0004s02870g [Populus trichocarpa]
          Length = 480

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 63/190 (33%), Positives = 86/190 (45%), Gaps = 58/190 (30%)
 Frame = -1

Query: 408 TIQMMGI----SFSSTDDWNQNLLQDSGKSEQNYPQMLQ--LADEGFNSSM-------NN 268
           T+QMMG     S SS+ DWNQ LL  +G++E +Y  M+Q  +   G NSS         +
Sbjct: 101 TLQMMGYGLSSSSSSSSDWNQALLPGNGRTE-SYNSMMQEEMNSGGLNSSQIQKDWSPKS 159

Query: 267 YGQNNTDDFS---ESINFPLNSD--------------------SYSYTSSLLQNLFXXXX 157
           Y  +  +DFS   + +N P+NS                     SY Y S+L+Q+LF    
Sbjct: 160 Y-TSTAEDFSLDQQRLN-PVNSSGNSPPTCQGFSTGFSMEPSASYGYPSTLIQSLFEPEY 217

Query: 156 XXXXXXXT-------NYLS-SPNNYQMNSTDF--------------LPKQQPAANNHLQF 43
                  +       NYLS +  NY  N T+               LPKQQP+    L F
Sbjct: 218 PQPQQAQSLFNNRFMNYLSPTAPNYGTNMTELSSPSWPKVSPLIKPLPKQQPST---LHF 274

Query: 42  TNNTPFWNAT 13
           TNNTP+WNA+
Sbjct: 275 TNNTPYWNAS 284


>ref|XP_004232764.1| PREDICTED: uncharacterized protein LOC101268539 [Solanum
           lycopersicum]
          Length = 440

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 30/142 (21%)
 Frame = -1

Query: 432 VLQK-PSHD-TIQMMGI---SFSSTDDWNQNLLQDSGKSEQNYPQMLQLADEGFNSSMNN 268
           VLQ+ P HD T+Q++G    S S+ D+W+  L+  + +SE +YP +LQ   E  NSSMN 
Sbjct: 66  VLQELPKHDSTLQILGSGLNSSSTNDNWSHTLMHGNDRSESSYPSILQ--QEDINSSMNY 123

Query: 267 YGQNNTD--------DFSESIN-----------------FPLNSDSYSYTSSLLQNLFXX 163
             ++  D        DF+  +N                 FP+NS   +Y S+LLQ LF  
Sbjct: 124 QQESGVDCSSNSFKQDFTLGMNHPITSSTNTHHDQISSTFPMNSSFSNYPSALLQTLFDN 183

Query: 162 XXXXXXXXXTNYLSSPNNYQMN 97
                     +  ++ NN  MN
Sbjct: 184 DPPQQQQLQQSLFATNNNQPMN 205


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