BLASTX nr result
ID: Rehmannia23_contig00010117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00010117
(2699 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 1328 0.0
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 1293 0.0
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 1293 0.0
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 1280 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1280 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1271 0.0
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 1238 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1207 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1187 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1176 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1165 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1158 0.0
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1157 0.0
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s... 1154 0.0
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 1154 0.0
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 1149 0.0
gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus... 1143 0.0
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 1141 0.0
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 1140 0.0
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 1139 0.0
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 1328 bits (3437), Expect = 0.0
Identities = 661/901 (73%), Positives = 748/901 (83%), Gaps = 2/901 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
EEKE FL+KMRN + EPLKK ++ K +VK+CN+ AGS + KC RCG+INGMVKRAP
Sbjct: 118 EEKEHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAKCPRCGHINGMVKRAPY 177
Query: 181 RIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLYLN 360
++ +DR +V+D+ ++ECQSA K RGN +ST+D ++LL+NMLDEDCELLY++
Sbjct: 178 KVMYDRGRVIDSQMEECQSAGPSMKASRGNT--TSTLDALFVFRLLRNMLDEDCELLYIH 235
Query: 361 DRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNLHN 540
DRPEKL+VTNILVPP AIRPSVFVDGGTQSNENDITERLK II+ANA+L Q++LETN++
Sbjct: 236 DRPEKLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYK 295
Query: 541 RSLTSWDDLQMEVAQYINSDVRGVPLYMT-AARPLSGFVQRLKGKQGRFRGNLSGKRVEY 717
+ +TSW+ LQ+EVAQYINSD RG+PLY +++PLSGFVQRLKGKQGRFRGNLSGKRVEY
Sbjct: 296 KGVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEY 355
Query: 718 TGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQ 897
TGRTVISPDPNLKI +VA+PILMA+ILTYPERVSH NI +LR+CVR GPN+YPGAK+IRQ
Sbjct: 356 TGRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQ 415
Query: 898 PDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWR 1077
PDGT ISL + RK HAD LKYG IVDRHL+DGDIVLFNRQPSLHRMSIM HRARIMPWR
Sbjct: 416 PDGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWR 475
Query: 1078 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQD 1257
TLRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMGVQNNLCTPKNGE+LVASTQD
Sbjct: 476 TLRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMGVQNNLCTPKNGEVLVASTQD 535
Query: 1258 FLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRP 1437
FLTSS+LITRKDTFYDRS+FSL+C+++ D +DLP PA+VKP ELWTGKQ+FSVLLRP
Sbjct: 536 FLTSSFLITRKDTFYDRSAFSLICAFVSDGLGTVDLPMPAVVKPVELWTGKQIFSVLLRP 595
Query: 1438 HAKMRVYLNLTLAEKNYGKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVL 1617
+V++NLT+AEK Y KS ETMCP+DGFV IRNSELISGQLGKATLGNG+KDGLYS+L
Sbjct: 596 DKDRKVFVNLTVAEKIYVKSGETMCPRDGFVCIRNSELISGQLGKATLGNGSKDGLYSIL 655
Query: 1618 LRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDY 1797
LRDY HAAA CMNRLAKLSARWIGNHGFSIGINDVQPG LN EKK ID EYGQC Y
Sbjct: 656 LRDYGAHAAADCMNRLAKLSARWIGNHGFSIGINDVQPGDILNTEKKTVIDDEYGQCIRY 715
Query: 1798 IESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCGSKG 1977
IESYKSG L+LLPGCN AETLEAKITGTLN IR+TTA VCM NL+WRNSPLIMSQCGSKG
Sbjct: 716 IESYKSGKLELLPGCNKAETLEAKITGTLNKIRDTTAEVCMTNLSWRNSPLIMSQCGSKG 775
Query: 1978 SPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEF 2157
SPINICQM+ACVGQQSVGGRRAPNGFLDRTLPHFER AKDPDAKGFVQNSFYTGL TEF
Sbjct: 776 SPINICQMVACVGQQSVGGRRAPNGFLDRTLPHFERGAKDPDAKGFVQNSFYTGLLPTEF 835
Query: 2158 FFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGGDGM 2337
FFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSV YD+TVRNASG IVQF YG DG+
Sbjct: 836 FFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSVQYDSTVRNASGCIVQFTYGDDGL 895
Query: 2338 DPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTTREE 2517
DPAQMEEK+G PLNFERLFMK KATCP+ Q S S+S
Sbjct: 896 DPAQMEEKTGFPLNFERLFMKAKATCPSEGQPSLKAEDIDFIINRVIEENHSRSDI---- 951
Query: 2518 GFAHNFASSSDTPSNKEGCLEAFQNSLRNFIMKK-YPSSILMLKSNERQHSEEDRSCLEN 2694
S E C E F+ SL F+ K+ YP+ +L K N S +D+S +++
Sbjct: 952 -------------SEMEKCSETFEASLLRFLNKRVYPTGMLSEKLNSENISLQDKSYVQS 998
Query: 2695 V 2697
V
Sbjct: 999 V 999
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 1293 bits (3347), Expect = 0.0
Identities = 654/914 (71%), Positives = 739/914 (80%), Gaps = 17/914 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
+EK + +L+KMR+ K E LKK E++K +V+KC AMA SK+AVKCSRCGY+NG+VK+A
Sbjct: 122 DEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVS 181
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLY 354
L I HDR+K+ D L+EC SAISHTKE + + +V ++P L K M+DEDC+LL
Sbjct: 182 VLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLN 241
Query: 355 LNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNL 534
L +RPEKL++TNI VPPIAIRPSVF+DGGTQSNEND+TERLKRIIQANASL QE+ +T
Sbjct: 242 LAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGS 301
Query: 535 HNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVE 714
++ L WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGKRVE
Sbjct: 302 TSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 361
Query: 715 YTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIR 894
YTGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK IR
Sbjct: 362 YTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIR 421
Query: 895 QPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 1074
PDG++ SLM + RKR ADELKYGYIV+RHLEDGD+VLFNRQPSLHRMSIM HRARIMPW
Sbjct: 422 YPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 481
Query: 1075 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 1254
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ
Sbjct: 482 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 541
Query: 1255 DFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLR 1434
DFLTSS+LITRKDTFYDR++FSLMCSYMGD D +DLPTPA++K ELWTGKQLF+VLLR
Sbjct: 542 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKAMELWTGKQLFNVLLR 601
Query: 1435 PHAKMRVYLNLTLAEKNYGK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLY 1608
PHA +RVYLNLT+ EK Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDGL+
Sbjct: 602 PHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLF 661
Query: 1609 SVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQC 1788
SVLLRDYN HAAAACMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I++ Y C
Sbjct: 662 SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENC 721
Query: 1789 TDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCG 1968
+ I+ Y G L L PGCN A+TLEA+ITG LN IRETTANVCM+ L+WRNSPLIMSQCG
Sbjct: 722 HELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCG 781
Query: 1969 SKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSA 2148
SKGSPINI QMIACVGQQSVGGRRAP+GF+DRTLPHF R++K PDAKGFV +SFYTGL+A
Sbjct: 782 SKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTA 841
Query: 2149 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGG 2328
TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLS+ YD TVRNA+G IVQF+YG
Sbjct: 842 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGD 901
Query: 2329 DGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTT 2508
DGMDPA+ME K G PLNF RLF+K KATCPA E S + K T
Sbjct: 902 DGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENAS------LSALQIEETVKRLKEHNT 955
Query: 2509 REEGFAHNFASSSDTPSNKEGCLEAFQNSLRNF-------------IMKKYPSSILMLKS 2649
EG + F ++ E C E F+N+ I +K+ +I + S
Sbjct: 956 SAEGCSDAF--KTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITS 1013
Query: 2650 NERQHSEEDRSCLE 2691
+ QH D S L+
Sbjct: 1014 KQLQHVNTDHSHLQ 1027
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 1293 bits (3346), Expect = 0.0
Identities = 646/874 (73%), Positives = 730/874 (83%), Gaps = 4/874 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
+EK + +L+KMR+ K E LKK E++K +V+KC AMA SK+AVKCSRCGY+NG+VK+A
Sbjct: 122 DEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVS 181
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLY 354
L I HDR+K+ D L+EC SAISHTKE + + +V ++P L K M+DEDC+LL
Sbjct: 182 VLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLN 241
Query: 355 LNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNL 534
L +RPEKL++TNI VPPIAIRPSVF+DGGTQSNEND+TERLKRIIQANASL QE+ +T
Sbjct: 242 LAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGS 301
Query: 535 HNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVE 714
++ L WD LQ+EVAQYINSDVRGVPL M AARPLSGFVQRLKGKQGRFRGNLSGKRVE
Sbjct: 302 TSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVE 361
Query: 715 YTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIR 894
YTGRTVISPDPNLKI +VAIPILMA+IL+YPERVSHHNIEKLRQC+ NGP KYPGAK IR
Sbjct: 362 YTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIR 421
Query: 895 QPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPW 1074
PDG++ SLM + RKR ADELKYGYIV+RHLEDGD+VLFNRQPSLHRMSIM HRARIMPW
Sbjct: 422 YPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPW 481
Query: 1075 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 1254
RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ
Sbjct: 482 RTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQ 541
Query: 1255 DFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLR 1434
DFLTSS+LITRKDTFYDR++FSLMCSYMGD D +DLPTPA++KP ELWTGKQLF+VLLR
Sbjct: 542 DFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLR 601
Query: 1435 PHAKMRVYLNLTLAEKNYGK--SKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLY 1608
PHA +RVYLNLT+ EK Y K KETMCP DGFVY RNSELISGQLGKATLGNGNKDGL+
Sbjct: 602 PHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLF 661
Query: 1609 SVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQC 1788
SVLLRDYN HAAAACMNRLAKLSARWIGNHGFSIGI+DVQPG LN +K I++ Y C
Sbjct: 662 SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENC 721
Query: 1789 TDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCG 1968
+ I+ Y G L L PGCN A+TLEA+ITG LN IRETTANVCM+ L+WRNSPLIMSQCG
Sbjct: 722 HELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCG 781
Query: 1969 SKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSA 2148
SKGSPINI QMIACVGQQSVGGRRAP+GF+DRTLPHF R++K PDAKGFV +SFYTGL+A
Sbjct: 782 SKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFVASSFYTGLTA 841
Query: 2149 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGG 2328
TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLS+ YD TVRNA+G IVQF+YG
Sbjct: 842 TEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNANGSIVQFLYGD 901
Query: 2329 DGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTT 2508
DGMDPA+ME K G PLNF RLF+K KATCPA E S ++ ++
Sbjct: 902 DGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENAS------------LSALQIEETVKR 949
Query: 2509 REEGFAHNFASSSDTPSNKEGCLEAFQNSLRNFI 2610
+E HN ++ EGC +AF+ +L F+
Sbjct: 950 LKE---HN--------TSAEGCSDAFKTNLSGFL 972
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 1280 bits (3312), Expect = 0.0
Identities = 646/903 (71%), Positives = 735/903 (81%), Gaps = 4/903 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+CGY+NGMVK+ L
Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQL 184
Query: 181 RIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLYLN 360
+I H++ + LDE AIS +E R + +V +DPK+ Y L KNM DEDCELLYL+
Sbjct: 185 KITHEQGNRI---LDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLS 241
Query: 361 DRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNLHN 540
DRPEKL+VT+I VPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASL QEM +++
Sbjct: 242 DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS-PV 300
Query: 541 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 720
+SL W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 721 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 900
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 901 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 1080
DG+ ISLM RKRHADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 1081 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1260
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540
Query: 1261 LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 1440
LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF +LLRP+
Sbjct: 541 LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPY 600
Query: 1441 AKMRVYLNLTLAEKNYGKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLL 1620
+KMRVY+NLT+ EK+Y ETMCP DGFVY RNSELISGQLGKATLGNGNKDGLYSVLL
Sbjct: 601 SKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL 660
Query: 1621 RDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYI 1800
RDY +HAAA CMNRLAKLSARWIGNHGFSIGI+DV PG L K+K+ I + Y +C D I
Sbjct: 661 RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720
Query: 1801 ESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCGSKGS 1980
+ G L + PGC+ A+TLEA++T +LN +R+ +CMK L+WRNSPLIMSQCGSKGS
Sbjct: 721 TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780
Query: 1981 PINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFF 2160
PINI QMIACVGQQSVGGRRAP+GF+DR+LPHF ++K P AKGFV +SF+ GLSATEFF
Sbjct: 781 PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840
Query: 2161 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGGDGMD 2340
FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL+V+YD+TVRNAS IVQFMYG DGMD
Sbjct: 841 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900
Query: 2341 PAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTTREEG 2520
P+QMEEK G PLNF RLFMK KATCP +KS RLS T E
Sbjct: 901 PSQMEEKKGRPLNFSRLFMKVKATCPPGGEKS----LSYSEICEIVNERLSYHDMTPE-- 954
Query: 2521 FAHNFASSSDTPSNKEGCLEAFQNSLRNFIMKKYPSSILMLKSN----ERQHSEEDRSCL 2688
GC EAF++SL +F++K ++ L+ + E Q+ +DR L
Sbjct: 955 ---------------GGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 2689 ENV 2697
E +
Sbjct: 1000 EKI 1002
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1280 bits (3312), Expect = 0.0
Identities = 646/903 (71%), Positives = 735/903 (81%), Gaps = 4/903 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+CGY+NGMVK+ L
Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQL 184
Query: 181 RIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLYLN 360
+I H++ + LDE AIS +E R + +V +DPK+ Y L KNM DEDCELLYL+
Sbjct: 185 KITHEQGNRI---LDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLS 241
Query: 361 DRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNLHN 540
DRPEKL+VT+I VPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASL QEM +++
Sbjct: 242 DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS-PV 300
Query: 541 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 720
+SL W DLQMEVAQYINSDVRGVPL+M A RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 721 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 900
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 901 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 1080
DG+ ISLM RKRHADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 1081 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1260
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540
Query: 1261 LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 1440
LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF +LLRP+
Sbjct: 541 LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHMLLRPY 600
Query: 1441 AKMRVYLNLTLAEKNYGKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLL 1620
+KMRVY+NLT+ EK+Y ETMCP DGFVY RNSELISGQLGKATLGNGNKDGLYSVLL
Sbjct: 601 SKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL 660
Query: 1621 RDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYI 1800
RDY +HAAA CMNRLAKLSARWIGNHGFSIGI+DV PG L K+K+ I + Y +C D I
Sbjct: 661 RDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720
Query: 1801 ESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCGSKGS 1980
+ G L + PGC+ A+TLEA++T +LN +R+ +CMK L+WRNSPLIMSQCGSKGS
Sbjct: 721 TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780
Query: 1981 PINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFF 2160
PINI QMIACVGQQSVGGRRAP+GF+DR+LPHF ++K P AKGFV +SF+ GLSATEFF
Sbjct: 781 PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840
Query: 2161 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGGDGMD 2340
FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL+V+YD+TVRNAS IVQFMYG DGMD
Sbjct: 841 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900
Query: 2341 PAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTTREEG 2520
P+QMEEK G PLNF RLFMK KATCP +KS RLS T E
Sbjct: 901 PSQMEEKKGRPLNFSRLFMKVKATCPPGGEKS----LSYSEICEIVNERLSYHDMTPE-- 954
Query: 2521 FAHNFASSSDTPSNKEGCLEAFQNSLRNFIMKKYPSSILMLKSN----ERQHSEEDRSCL 2688
GC EAF++SL +F++K ++ L+ + E Q+ +DR L
Sbjct: 955 ---------------GGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 2689 ENV 2697
E +
Sbjct: 1000 EKI 1002
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1271 bits (3290), Expect = 0.0
Identities = 644/903 (71%), Positives = 731/903 (80%), Gaps = 4/903 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
++KER+ L+KMRN +TE LKK+E+ K VVK+CNAMAG ++ CS+CGY+NGMVK+ L
Sbjct: 125 DDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMVKKLQL 184
Query: 181 RIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTIDPKIAYQLLKNMLDEDCELLYLN 360
+I H++ + LDE AIS +E R + +V IDPK+ Y L KNM DEDCELLYL+
Sbjct: 185 KITHEQGNRI---LDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLYLS 241
Query: 361 DRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETNLHN 540
DRPEKL+VT+I VPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASL QEM +++
Sbjct: 242 DRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDSS-PV 300
Query: 541 RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRVEYT 720
+SL W DLQMEVAQYINSDVRGVPL M RPLSGF QRLKGKQGRFRGNLSGKRVEYT
Sbjct: 301 KSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 721 GRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYIRQP 900
GRTVISPDPNLKI +VAIPILMA+ILTYPERVS HNIEKLRQCVRNGPNKYPGAK+IR P
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 901 DGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 1080
DG +SLM + RKR+ADELK+GYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT
Sbjct: 421 DGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 1081 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDF 1260
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK+GEILVASTQDF
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKSGEILVASTQDF 540
Query: 1261 LTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLLRPH 1440
LTSS+LITRKDTFY+R+SFSL+CSYMGDA DP DLP+PA +KP ELWTGKQLF VLLRP+
Sbjct: 541 LTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELWTGKQLFHVLLRPY 600
Query: 1441 AKMRVYLNLTLAEKNYGKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNKDGLYSVLL 1620
+KMRVY+NLTL EK+Y ETMC DGFVY RNSELISGQLGKATLGNGNKDGLYSVLL
Sbjct: 601 SKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATLGNGNKDGLYSVLL 660
Query: 1621 RDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKEYGQCTDYI 1800
RDY +HAAA CMNRLAKLSARWIGNHGFSIGI+DV PG L K+K+ I + Y +C D I
Sbjct: 661 RDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQGEIHRNYKKCEDCI 720
Query: 1801 ESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIMSQCGSKGS 1980
+ G L + PGC+ A+TLEA++T +LN +R+ +CMK L+WRNSPLIMSQCGSKGS
Sbjct: 721 TQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRNSPLIMSQCGSKGS 780
Query: 1981 PINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYTGLSATEFF 2160
PINI QMIACVGQQSVGGRRAP+GF+DR+LPHF ++K P AKGFV +SF+ GLSATEFF
Sbjct: 781 PINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVAHSFFDGLSATEFF 840
Query: 2161 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQFMYGGDGMD 2340
FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL+V+YD+TVRNAS IVQFMYG DGMD
Sbjct: 841 FHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASACIVQFMYGDDGMD 900
Query: 2341 PAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLSKSTTTREEG 2520
P++MEEK G PLNF RLFMK KATCP +KS RLS T E
Sbjct: 901 PSRMEEKKGRPLNFSRLFMKVKATCPPGGEKS----LSYSEICEIVNERLSYHDMTPE-- 954
Query: 2521 FAHNFASSSDTPSNKEGCLEAFQNSLRNFIMKKYPSSILMLKSN----ERQHSEEDRSCL 2688
GC EAF+ SL +F++K ++ L+ + E Q+ +DR L
Sbjct: 955 ---------------GGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDRGYL 999
Query: 2689 ENV 2697
E +
Sbjct: 1000 EKI 1002
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 1238 bits (3202), Expect = 0.0
Identities = 622/825 (75%), Positives = 699/825 (84%), Gaps = 14/825 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
+EK + +L++MR+ K + LKK +I+K++VKKC+AMA SK AVKC RCGY+NG VK+A
Sbjct: 120 DEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSK-AVKCWRCGYVNGTVKKAVA 178
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSS-TIDPKIAYQLLKNMLDEDCELL 351
L I HDR+K+ DN L+E +SAISHTKE + + NV++ ++P L K M D DCELL
Sbjct: 179 MLGIIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELL 238
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL+DRPEKLI+TNI VPPI IRPSV +DG +QSNENDITERLKRIIQANASLRQE++ETN
Sbjct: 239 YLSDRPEKLIITNIAVPPIPIRPSVIMDG-SQSNENDITERLKRIIQANASLRQELVETN 297
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+ L W+ LQ+EVAQYINSDVRGVP M ++PLSGFVQR+KGK GRFRGNLSGKRV
Sbjct: 298 AAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFRGNLSGKRV 357
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
EYTGRTVISPDPNLKI +VAIPI MARILTYPERVS+HNIEKLRQCVRNGP+KYPGA+ +
Sbjct: 358 EYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMV 417
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R PDG+ L+ + RKR ADELK+G +VDRHLEDGDIVLFNRQPSLHRMSIM HRARIMP
Sbjct: 418 RYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMP 477
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST
Sbjct: 478 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 537
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKD FYDR++FSL+CSYMGD D IDLPTPAL+KP ELWTGKQLFSVLL
Sbjct: 538 QDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTGKQLFSVLL 597
Query: 1432 RPHAKMRVYLNLTLAEKNYGK-----------SKETMCPKDGFVYIRNSELISGQLGKAT 1578
RPHA +RVYLNL + E+NY K ETMCP DGFVYIRNSELI GQLGKAT
Sbjct: 598 RPHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELICGQLGKAT 657
Query: 1579 LGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKK 1758
LGNGNKDGLYSVLLRDYN HAAAACMNRLAKLSARWIGNHGFSIGI+DVQPG LN EK
Sbjct: 658 LGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGKRLNDEKA 717
Query: 1759 VTIDKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWR 1938
+TI +Y +C + I+++ G L PG + A+TLEA +T LNNIR+ T VCMK L+WR
Sbjct: 718 LTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKVCMKELHWR 777
Query: 1939 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFV 2118
NSPLIMSQCGSKGS INI QMIACVGQQSVGGRRAPNGF+DR+LPHF R +K P AKGFV
Sbjct: 778 NSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSKTPAAKGFV 837
Query: 2119 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNAS 2298
NSFY+GL+ATEFFFHTM GREGLVDTAVKTA+TGYMSRRL+KALEDLS+HYDNTVRNAS
Sbjct: 838 ANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHYDNTVRNAS 897
Query: 2299 GFIVQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQK 2433
G IVQF+YG DGMDPA ME KSG PLNF+RL MK KATCP IEQK
Sbjct: 898 GCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQK 942
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1207 bits (3122), Expect = 0.0
Identities = 622/883 (70%), Positives = 693/883 (78%), Gaps = 14/883 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
EEK + +L+KMRN K E L+K +++K++VKKC+ MA +AVKC RCGYINGMVK+A
Sbjct: 129 EEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS--KAVKCPRCGYINGMVKKAVA 186
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCELL 351
L I HDR+KV ++ L E SAI+HTKE + NV++ I +P L K M D DCE+L
Sbjct: 187 VLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVL 245
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL++RPEKLI+TNI VPPIAIRPSV +DG +QSNENDITERLKRIIQ NASL+QE++E N
Sbjct: 246 YLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASLQQELVEAN 304
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+SL W+ LQ+EVAQYINSDVRGVP M ARPLSGFVQRLKGKQGRFRGNLSGKRV
Sbjct: 305 SAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRV 364
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
EYTGRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ I
Sbjct: 365 EYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMI 424
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R PDGT L R + A ELK G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMP
Sbjct: 425 RYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 484
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVAST
Sbjct: 485 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 544
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKDTFYDR++FSLMC YMGD D +DLPTPA++KP ELWTGKQLFSVL+
Sbjct: 545 QDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLI 604
Query: 1432 RPHAKMRVYLNLTLAEKNYGKSK-----------ETMCPKDGFVYIRNSELISGQLGKAT 1578
RPHA MRVY+NLT+ EK Y ETMCP DGFVY RNSELISGQLGKAT
Sbjct: 605 RPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKAT 664
Query: 1579 LGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKK 1758
LGNGNKDGLYSVLLRDY HA + CMNRLAKLSARWIGNHGFSIGI+DVQP EL+ +K
Sbjct: 665 LGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKG 724
Query: 1759 VTIDKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWR 1938
I + Y C I+ Y G L L PGC+ A+TLEA IT LN IRE CM +L WR
Sbjct: 725 KLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWR 784
Query: 1939 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFV 2118
NSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF R+AK+P AKGFV
Sbjct: 785 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFV 844
Query: 2119 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNAS 2298
NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YDN+VRNA
Sbjct: 845 ANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAG 904
Query: 2299 GFIVQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXX 2478
G IVQF+YG DGMDPA ME KSG PLNF+RL MK KATCP Q+
Sbjct: 905 GCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQR--------------- 949
Query: 2479 XXRLSKSTTTREEGFAHNFASSSDTPSNKEGCLEAFQNSLRNF 2607
LS + KE C EAF NSLR F
Sbjct: 950 --YLSPQQVS-------EIVEKQLAAYGKESCSEAFLNSLRKF 983
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 1187 bits (3071), Expect = 0.0
Identities = 609/881 (69%), Positives = 703/881 (79%), Gaps = 9/881 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
EEK + FL+KMRN K E L+K +++K ++KKC+ + ++ +CSRCGY+NG VK+A
Sbjct: 126 EEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVS 185
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCELL 351
L I H RA+ D A +++ R NVS+ I +P L + M DEDCELL
Sbjct: 186 MLGILHYRARSKD--------AGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELL 237
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
+L++RPEKLI+TN+LVPPIAIRPSV +DG +QSNENDITERLKRIIQ NAS+ QE+ +N
Sbjct: 238 FLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQNASVSQELSTSN 296
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+ L SWD LQ EVAQ INSDVRG+P M ++PL+GFVQRLKGKQGRFRGNL GKRV
Sbjct: 297 SQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRV 356
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
E+TGRTVISPDPNLKI +VA+PI MARILTYPERV+ HNIEKLRQCV NGP+KYPGA+ +
Sbjct: 357 EFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARML 416
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R DG++ SLM + RKR ADELKYG IV+RHLEDGD+VLFNRQPSLHRMSIM HR R+MP
Sbjct: 417 RHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMP 476
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA++LMGVQNNLCTPKNGEILVAST
Sbjct: 477 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAST 536
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKDTFYDR++FSLMCSYMGD D +DLPTPALVKP ELWTGKQLFSVL+
Sbjct: 537 QDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLV 596
Query: 1432 RPHAKMRVYLNLTLAEKNYGKSK------ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1593
RPHA M+VYLNLT+ EK+Y K K ETMCP DGFVY RNSELISGQ+GKATLGNGN
Sbjct: 597 RPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISGQVGKATLGNGN 656
Query: 1594 KDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDK 1773
KDGLYSVLLRDY HAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG +L K+K+ TI +
Sbjct: 657 KDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILE 716
Query: 1774 EYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLI 1953
Y C I + +G+L GC+ A++LE+KIT LN IRE TANVCM+NL+WRNSPLI
Sbjct: 717 GYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCMQNLHWRNSPLI 776
Query: 1954 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFY 2133
MSQCGSKGSPINI QM+ACVGQQSVGGRRAP+GF+DR+LPHF R+AK P AKGFV NSFY
Sbjct: 777 MSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTPAAKGFVANSFY 836
Query: 2134 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQ 2313
+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+HYD++VRNA G IVQ
Sbjct: 837 SGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDSSVRNAGGCIVQ 896
Query: 2314 FMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLS 2493
F YG DGMDPAQME KSG PLNFERLF+K KATCP+ K S
Sbjct: 897 FCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSP---------------S 941
Query: 2494 KSTTTREEGFAHNFASSSDTPSNKEGCLEAFQNSLRNFIMK 2616
+ + T E+ S D S + GC AF SL+ F+ K
Sbjct: 942 EFSETVEDRL------SKDDASPECGCSPAFVGSLKIFLNK 976
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1176 bits (3042), Expect = 0.0
Identities = 592/822 (72%), Positives = 675/822 (82%), Gaps = 11/822 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
+EK R+++L++MRN +TEPLKKNE++K +VKKC++MA SK AVKC RCGY+NGMVK+A
Sbjct: 125 DEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSK-AVKCLRCGYMNGMVKKAGS 183
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCELL 351
+ I HDR+K++D YL+EC+SAI HT+E R +++ I +P L + M++EDCELL
Sbjct: 184 VVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELL 243
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL RPEKLI+T I VPPI+IRPSVF +G +QSNENDITERLK+IIQ NA LR E+LE
Sbjct: 244 YLQGRPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAKLRLELLEGR 302
Query: 532 LHN-RSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 708
+ L WD+LQ V YINSDVR +PL M RPLSGFVQRL GKQGRFR NL+GKR
Sbjct: 303 RTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQGRFRQNLAGKR 361
Query: 709 VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 888
VE+TGRTVISPDPNLKI +VAIPI MARILTYPERV+HHNIEKLRQCV NG KYPGA+
Sbjct: 362 VEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARM 421
Query: 889 IRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 1068
+ PDG+ L N RKR A+ELK G IV RHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 422 VTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 481
Query: 1069 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1248
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMGVQNNLCTPKNGEILVAS
Sbjct: 482 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVAS 541
Query: 1249 TQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVL 1428
TQDFLTSS+LITRKDTFYDR++FSLMCSYM D D +DLPTP+++KP ELWTGKQLFSVL
Sbjct: 542 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVL 601
Query: 1429 LRPHAKMRVYLNLTLAEKNYG-------KSKETMCPKDGFVYIRNSELISGQLGKATLGN 1587
LRPHA +RVY+NL L EKNY K +ETMCP DG+VY RNSELISGQLGKATLGN
Sbjct: 602 LRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGN 661
Query: 1588 GNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTI 1767
GNKDGLYS+LLRDYN +AAA CMNRLAKLSARWIGNHGFSIGI+DVQPG +L EK TI
Sbjct: 662 GNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTI 721
Query: 1768 DKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSP 1947
Y C I Y G L L GC+ +TLE +IT LN +RE +VCMK L+WRNSP
Sbjct: 722 SNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDVCMKELHWRNSP 781
Query: 1948 LIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNS 2127
LIMSQCGSKGSPINI QMIACVGQQSVGG RAP+GF+DR+LPHF R++K P AKGFV NS
Sbjct: 782 LIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSKTPAAKGFVANS 841
Query: 2128 FYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFI 2307
FY+GLSATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL V YDNTV++A G I
Sbjct: 842 FYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQYDNTVQDAGGGI 901
Query: 2308 VQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQK 2433
VQF+YG DG+DPA ME K+G+PLNF+RLFMK KATC A E +
Sbjct: 902 VQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDE 943
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1165 bits (3015), Expect = 0.0
Identities = 597/824 (72%), Positives = 677/824 (82%), Gaps = 14/824 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
+EK + L+KMRN + E L+K+E++K +VKKC++M +K AVKC+RCG +NGMVK+A
Sbjct: 96 DEKLCKADLKKMRNPRIEHLRKSELVKKIVKKCSSMTSNK-AVKCTRCGDMNGMVKKAGS 154
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCELL 351
L I HDRAK+VD YL+EC+SAI+HTKE R ++++ I P L K + +EDCE+L
Sbjct: 155 VLSIIHDRAKLVDGYLEECRSAIAHTKESRAPISLATYILTPVKVLSLFKRIPEEDCEVL 214
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
L DRPEKLI+TNI VPPI+IRPSVF DG QSNENDITERLK+IIQANASLR E+LE
Sbjct: 215 GLYDRPEKLIITNIAVPPISIRPSVFTDG-LQSNENDITERLKQIIQANASLRMELLEGR 273
Query: 532 LH-NRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 708
+ N+ L SWD LQ VA Y+NSDVR VP + +PLSGFVQRLKGKQGRFRGNLSGKR
Sbjct: 274 MSVNKYLDSWDGLQAAVALYMNSDVR-VPNNVEVGKPLSGFVQRLKGKQGRFRGNLSGKR 332
Query: 709 VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 888
VE+TGRTVISPDPNLKI +VAIPI MARIL+YPERVSHHNIEKLRQ V NGP KYPGA
Sbjct: 333 VEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKYPGAST 392
Query: 889 IRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 1068
+R PDG+ L+ + RK A+EL +G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIM
Sbjct: 393 VRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIM 452
Query: 1069 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGV-QNNLCTPKNGEILVA 1245
PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGV QNNLCTPKNGEILVA
Sbjct: 453 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVA 512
Query: 1246 STQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSV 1425
STQDFLTSS+LITR+DTFYDR++FSLMCSYM D D IDLPTPA++KP ELWTGKQLFSV
Sbjct: 513 STQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSV 572
Query: 1426 LLRPHAKMRVYLNLTLAEKNYGK-------SKETMCPKDGFVYIRNSELISGQLGKATLG 1584
LLRP+A +RVY+NL + EK Y K KETMCP DGFVYIRNSELISGQLGKATLG
Sbjct: 573 LLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNSELISGQLGKATLG 632
Query: 1585 NGNKDGLYSVLLRDYNTHAAAACMNRLAKLS--ARWIGNHGFSIGINDVQPGVELNKEKK 1758
NGNKDGLYS+LLRDYN HAAA CMNRLAKL ARWIGNHGFSIGI+DVQPG +L K
Sbjct: 633 NGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKG 692
Query: 1759 VTIDKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWR 1938
TI Y QC IE Y G L L PGC+ +TLE++IT LN +RE +VCMK L+WR
Sbjct: 693 KTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLREEAGDVCMKELHWR 752
Query: 1939 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFV 2118
NSPLIMSQCGSKGS INI QM+ACVGQQSVGGRRAP+GF+DR+LPHF R++K P AKGFV
Sbjct: 753 NSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKSKTPAAKGFV 812
Query: 2119 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNAS 2298
NSFY+GL ATEFFFHTM GREGLVDTAVKTADTGYMSRRL+K LEDLS+ YDNTVRNAS
Sbjct: 813 ANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQYDNTVRNAS 872
Query: 2299 GFIVQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQ 2430
G IVQF+YG DG+DPA ME K G+PLN +RLF K KATCP E+
Sbjct: 873 GCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREE 916
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1158 bits (2996), Expect = 0.0
Identities = 605/883 (68%), Positives = 675/883 (76%), Gaps = 14/883 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP- 177
EEK + +L+KMRN K E L+K +++K++VKKC+ MA +AVKC RCGYINGMVK+A
Sbjct: 144 EEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMAS--KAVKCPRCGYINGMVKKAVA 201
Query: 178 -LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCELL 351
L I HDR+KV ++ L E SAI+HTKE + NV++ I +P L K M D DCE+L
Sbjct: 202 VLGIIHDRSKVTES-LQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMTDTDCEVL 260
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL++RPEKLI+TNI VPPIAIRPSV +DG +QSNENDITERLKRIIQ NASL+QE++E N
Sbjct: 261 YLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASLQQELVEAN 319
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+SL W+ LQ+EVAQYINSDVRGVP M ARPLSGFVQRLKGKQGRFRGNLSGKRV
Sbjct: 320 SAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRV 379
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
EYTGRTVISPDPNLKI +VAIPI MARILTYPERVS HNIEKLRQC++NGP+KYPGA+ I
Sbjct: 380 EYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMI 439
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R PDGT L R + A ELK G IVDRHLEDGD+VLFNRQPSLHRMSIM HRARIMP
Sbjct: 440 RYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 499
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMGVQNNLCTPKNGEILVAST
Sbjct: 500 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKNGEILVAST 559
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKDTFYDR++FSLMC YMGD D +DLPTPA++KP ELWTGKQLFSVL+
Sbjct: 560 QDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTGKQLFSVLI 619
Query: 1432 RPHAKMRVYLNLTLAEKNYGKSK-----------ETMCPKDGFVYIRNSELISGQLGKAT 1578
RPHA MRVY+NLT+ EK Y ETMCP DGFVY RNSELISGQLGKAT
Sbjct: 620 RPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELISGQLGKAT 679
Query: 1579 LGNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKK 1758
LG CMNRLAKLSARWIGNHGFSIGI+DVQP EL+ +K
Sbjct: 680 LG----------------------CMNRLAKLSARWIGNHGFSIGIDDVQPKKELSDKKG 717
Query: 1759 VTIDKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWR 1938
I + Y C I+ Y G L L PGC+ A+TLEA IT LN IRE CM +L WR
Sbjct: 718 KLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKACMGSLPWR 777
Query: 1939 NSPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFV 2118
NSPLIMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGF+DR+LPHF R+AK+P AKGFV
Sbjct: 778 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAKEPAAKGFV 837
Query: 2119 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNAS 2298
NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+ YDN+VRNA
Sbjct: 838 ANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNSVRNAG 897
Query: 2299 GFIVQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXX 2478
G IVQF+YG DGMDPA ME KSG PLNF+RL MK KATCP Q+
Sbjct: 898 GCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQR--------------- 942
Query: 2479 XXRLSKSTTTREEGFAHNFASSSDTPSNKEGCLEAFQNSLRNF 2607
LS + KE C EAF NSLR F
Sbjct: 943 --YLSPQQVS-------EIVEKQLAAYGKESCSEAFLNSLRKF 976
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 1157 bits (2992), Expect = 0.0
Identities = 580/819 (70%), Positives = 669/819 (81%), Gaps = 13/819 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILK-NVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP 177
+E R+ L+KMR++K L K + +K V+K C+ + V C RCGYING VK+ P
Sbjct: 126 DEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCS------KVVNCPRCGYINGSVKKLP 179
Query: 178 --LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCEL 348
L I HD +K + ++E SA+S K+ R NVS+ I +P L K MLDEDCEL
Sbjct: 180 ASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCEL 239
Query: 349 LYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLET 528
LY+ +RPEKLI+TN++VPPIAIRPSV +D SNENDITERLK IIQANA LRQE+ E+
Sbjct: 240 LYVAERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQELQES 298
Query: 529 NLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 708
++ L WD LQ EVAQ+INSDVRG+P YM + L+GFVQRLKGK GRFRGNLSGKR
Sbjct: 299 TFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKR 358
Query: 709 VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 888
VEYTGRTVISPDPNLKI++VAIPI MARILTYPERV+HHNIEKLRQCVRNGP+KYPGA+
Sbjct: 359 VEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARM 418
Query: 889 IRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 1068
+R+ G SL RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIM HRARIM
Sbjct: 419 LRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIM 478
Query: 1069 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1248
PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGV+NNLCTPKNGEILVAS
Sbjct: 479 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVAS 538
Query: 1249 TQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVL 1428
TQDFLTSS+LITRKDTFYDRS+FSL+CSY+GD DPIDLPTPA+VKP ELW+GKQLFS++
Sbjct: 539 TQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSII 598
Query: 1429 LRPHAKMRVYLNLTLAEKNYGKSK---------ETMCPKDGFVYIRNSELISGQLGKATL 1581
LRPHA MRVY+NLT+ E+NY + K +T+CP DGFVY RNSELISGQ+GK TL
Sbjct: 599 LRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTL 658
Query: 1582 GNGNKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKV 1761
GNGNKDGL+SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP L +K
Sbjct: 659 GNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDE 718
Query: 1762 TIDKEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRN 1941
TI + Y +C +IE++ G L+LL GC+ A+TLE +ITG LN +R+T VCM+ L+WRN
Sbjct: 719 TISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTLHWRN 778
Query: 1942 SPLIMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQ 2121
SPLIMSQCGSKGS INI QM+ACVGQQSVGGRR PNGF+DR+LPHF R++K P AKGFV
Sbjct: 779 SPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAKGFVA 838
Query: 2122 NSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASG 2301
NSFY+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+LMK+LEDL +HYD TVRNA G
Sbjct: 839 NSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVRNAGG 898
Query: 2302 FIVQFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCP 2418
IVQF YG DGMDPA ME K+G PLNFERLF+K+KA CP
Sbjct: 899 SIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICP 937
>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Cicer arietinum]
Length = 1291
Score = 1154 bits (2985), Expect = 0.0
Identities = 574/817 (70%), Positives = 677/817 (82%), Gaps = 10/817 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVK--RA 174
+E R+ +L+KMRN+K + L+K ++L++++K+ S + +KC RCGYING+VK R+
Sbjct: 18 DEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFR----SAKFIKCQRCGYINGIVKLTRS 73
Query: 175 PLRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSS-TIDPKIAYQLLKNMLDEDCELL 351
LRI HD + ++ + E QSA+SH KEYR +++S +DPK + L M DEDC LL
Sbjct: 74 TLRIVHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALL 133
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL +RPEKLI+TNI VPPI IRPSV +DG +QSNENDITE+L++IIQANA+L +E+ E+
Sbjct: 134 YLAERPEKLIITNIAVPPIVIRPSVIMDG-SQSNENDITEKLRKIIQANAALHKELEEST 192
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+ ++ LQ VAQYINSDV+G P M A++PL+GFVQR+KGKQGRFR NLSGKRV
Sbjct: 193 ---KFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRV 249
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
EYTGRTVISPDPNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +
Sbjct: 250 EYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLL 309
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R GT +L + RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMP
Sbjct: 310 RHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMP 369
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVAST
Sbjct: 370 WRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVAST 429
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKDTFYDRS+FSL+CSYMGD DPIDLPTPA++KP ELW+GKQLFS+LL
Sbjct: 430 QDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILL 489
Query: 1432 RPHAKMRVYLNLTLAEKNYG-------KSKETMCPKDGFVYIRNSELISGQLGKATLGNG 1590
RPHA +RVY+NLT+ EK + + +TMCP DGFVY RNSELISGQLGK TLGNG
Sbjct: 490 RPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNG 549
Query: 1591 NKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTID 1770
NKDGL+SVLLRDY HAAA+CMNRLAK SARWIGNHGFSIGI+DVQP L KK TI
Sbjct: 550 NKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETIT 609
Query: 1771 KEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPL 1950
Y +C +IE++ G L+L PGC+ A+TLEAKI LN++R+TTA VCM+ L+WRNSPL
Sbjct: 610 TGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPL 669
Query: 1951 IMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSF 2130
IMSQCGSKGSPINICQM+ACVGQQSVGG RA NGF+DR+LPHF ++AK P KGFV NSF
Sbjct: 670 IMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSF 729
Query: 2131 YTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIV 2310
+TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL +HYD TVR+ +G IV
Sbjct: 730 FTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIV 789
Query: 2311 QFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPA 2421
QF YG DGMDP+ ME K+G PLNF+RLF+K+KA CP+
Sbjct: 790 QFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPS 826
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 1154 bits (2985), Expect = 0.0
Identities = 574/817 (70%), Positives = 677/817 (82%), Gaps = 10/817 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVK--RA 174
+E R+ +L+KMRN+K + L+K ++L++++K+ S + +KC RCGYING+VK R+
Sbjct: 126 DEDTRKKYLKKMRNSKLDELQKIQLLESIMKRFR----SAKFIKCQRCGYINGIVKLTRS 181
Query: 175 PLRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSS-TIDPKIAYQLLKNMLDEDCELL 351
LRI HD + ++ + E QSA+SH KEYR +++S +DPK + L M DEDC LL
Sbjct: 182 TLRIVHDCSHGKNDVVSELQSALSHMKEYRATNDLASRNLDPKSVHSLFTKMSDEDCALL 241
Query: 352 YLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLETN 531
YL +RPEKLI+TNI VPPI IRPSV +DG +QSNENDITE+L++IIQANA+L +E+ E+
Sbjct: 242 YLAERPEKLIITNIAVPPIVIRPSVIMDG-SQSNENDITEKLRKIIQANAALHKELEEST 300
Query: 532 LHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKRV 711
+ ++ LQ VAQYINSDV+G P M A++PL+GFVQR+KGKQGRFR NLSGKRV
Sbjct: 301 ---KFQGGFEMLQFLVAQYINSDVKGGPYSMQASKPLTGFVQRIKGKQGRFRSNLSGKRV 357
Query: 712 EYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKYI 891
EYTGRTVISPDPNLKI +VAIPI MARILTYPERV+HHNIEKLRQC+RNGP+KYPGAK +
Sbjct: 358 EYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCLRNGPDKYPGAKLL 417
Query: 892 RQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 1071
R GT +L + RKR ADEL++G IVDRHLEDGD+VLFNRQPSLHRMS+M HRARIMP
Sbjct: 418 RHAGGTTWNLKVSCRKRLADELRFGDIVDRHLEDGDVVLFNRQPSLHRMSMMCHRARIMP 477
Query: 1072 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST 1251
WRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LM VQNNLCTPKNGEILVAST
Sbjct: 478 WRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALLLMTVQNNLCTPKNGEILVAST 537
Query: 1252 QDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVLL 1431
QDFLTSS+LITRKDTFYDRS+FSL+CSYMGD DPIDLPTPA++KP ELW+GKQLFS+LL
Sbjct: 538 QDFLTSSFLITRKDTFYDRSTFSLICSYMGDGMDPIDLPTPAIIKPVELWSGKQLFSILL 597
Query: 1432 RPHAKMRVYLNLTLAEKNYG-------KSKETMCPKDGFVYIRNSELISGQLGKATLGNG 1590
RPHA +RVY+NLT+ EK + + +TMCP DGFVY RNSELISGQLGK TLGNG
Sbjct: 598 RPHANVRVYVNLTVKEKTHNAKLDDRKREMKTMCPNDGFVYFRNSELISGQLGKVTLGNG 657
Query: 1591 NKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTID 1770
NKDGL+SVLLRDY HAAA+CMNRLAK SARWIGNHGFSIGI+DVQP L KK TI
Sbjct: 658 NKDGLFSVLLRDYKAHAAASCMNRLAKFSARWIGNHGFSIGIDDVQPKEILIHRKKETIT 717
Query: 1771 KEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPL 1950
Y +C +IE++ G L+L PGC+ A+TLEAKI LN++R+TTA VCM+ L+WRNSPL
Sbjct: 718 TGYSECDGFIEAFNKGKLELAPGCDAAQTLEAKIFQKLNSLRDTTAKVCMQTLHWRNSPL 777
Query: 1951 IMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSF 2130
IMSQCGSKGSPINICQM+ACVGQQSVGG RA NGF+DR+LPHF ++AK P KGFV NSF
Sbjct: 778 IMSQCGSKGSPINICQMVACVGQQSVGGCRAANGFVDRSLPHFTKKAKTPADKGFVANSF 837
Query: 2131 YTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIV 2310
+TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDL +HYD TVR+ +G IV
Sbjct: 838 FTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLFLHYDYTVRDTNGGIV 897
Query: 2311 QFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPA 2421
QF YG DGMDP+ ME K+G PLNF+RLF+K+KA CP+
Sbjct: 898 QFCYGDDGMDPSGMEGKNGKPLNFDRLFLKSKAICPS 934
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 1149 bits (2972), Expect = 0.0
Identities = 578/815 (70%), Positives = 662/815 (81%), Gaps = 9/815 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
+EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C +CGY+NGMVK+
Sbjct: 124 DEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA-SQRIITCKKCGYLNGMVKKIAA 182
Query: 181 R----IQHDRAKVVDNYLDECQSAISHTKEYRGNAN-VSSTIDPKIAYQLLKNMLDEDCE 345
+ I HDR+K+ +DEC+SAISHTKE N ++ +DP + L K M D+DCE
Sbjct: 183 QMGIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDKDCE 242
Query: 346 LLYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLE 525
LLY+ RPE LI T +LVPP++IRPSV + GGT+SNENDITERLK IIQ NA L + + +
Sbjct: 243 LLYIAHRPENLITTCMLVPPLSIRPSVMI-GGTRSNENDITERLKLIIQNNACLHRILSQ 301
Query: 526 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 705
+++ WD +Q EVA+YINS+VRGV PLSG +QRLKGKQGRFR NLSGK
Sbjct: 302 PTTSPKNMQVWDTVQSEVAKYINSEVRGVQ-NQPEKTPLSGLLQRLKGKQGRFRANLSGK 360
Query: 706 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 885
RVEYTGRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+
Sbjct: 361 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420
Query: 886 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 1065
+R PDG+ +L+ + RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIM HRARI
Sbjct: 421 NVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 480
Query: 1066 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1245
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA
Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540
Query: 1246 STQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSV 1425
STQDFLT+S+LITRKDTFYDR++FSL+CSYMGD D IDLPTP ++KP ELWTGKQLFSV
Sbjct: 541 STQDFLTTSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTILKPIELWTGKQLFSV 600
Query: 1426 LLRPHAKMRVYLNLTLAEKNYGKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1593
LLRP+A +RVY+ L + EKN+ K + ETMC DG+VY RNSELISGQLGKATLGNGN
Sbjct: 601 LLRPNASVRVYVTLNVKEKNFKKGEHGFDETMCVNDGWVYFRNSELISGQLGKATLGNGN 660
Query: 1594 KDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDK 1773
KDGLYS+LLRDYN+HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG ELNKE+K +I
Sbjct: 661 KDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELNKERKDSIQF 720
Query: 1774 EYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLI 1953
Y QC IE + G+L L G + A++LEA+ITG LN IRE T CM L+WRNSPLI
Sbjct: 721 GYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLI 780
Query: 1954 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFY 2133
MSQCGSKGSPINI QM+ACVGQQ+V G RAP+GF+DR+LPHF R +K P AKGFV NSFY
Sbjct: 781 MSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFY 840
Query: 2134 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQ 2313
+GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMKALEDL VHYDNTVRNASG I+Q
Sbjct: 841 SGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQ 900
Query: 2314 FMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCP 2418
F YG DGMDPA ME K G PLNF+RLF+K +ATCP
Sbjct: 901 FTYGDDGMDPALMEGKDGAPLNFDRLFLKIQATCP 935
>gb|ESW04135.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 1143 bits (2957), Expect = 0.0
Identities = 569/816 (69%), Positives = 669/816 (81%), Gaps = 10/816 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILK-NVVKKCNAMAGSKRAVKCSRCGYINGMVKRAP 177
+E R+ L+KMR++K L K + +K ++K C+ + V C RCGYING VK+ P
Sbjct: 126 DEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCS------KVVNCPRCGYINGSVKKLP 179
Query: 178 --LRIQHDRAKVVDNYLDECQSAISHTKEYRGNANVSSTI-DPKIAYQLLKNMLDEDCEL 348
L I HD +K +N ++E +S +S K+ + ANVS+ I +P L + MLDEDCEL
Sbjct: 180 ASLIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCEL 239
Query: 349 LYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLET 528
LY+ +RPEKLI+TNI+VPPIAIRPSV +D SNENDITERLK IIQANA LRQE+ E+
Sbjct: 240 LYVAERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQELQES 298
Query: 529 NLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGKR 708
++ ++ L W+ LQ EVAQ+INS+VRG+P YM + + L+GFVQRLKGK GRFRGNLSGKR
Sbjct: 299 SVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNLSGKR 358
Query: 709 VEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAKY 888
VEYTGRTVISPDPNLKI++VAIPILMA ILTYPERV+HHNIEKLRQCVRNGP+KYPGA+
Sbjct: 359 VEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARM 418
Query: 889 IRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 1068
+R+ G SL RKR ADEL+ G IVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM
Sbjct: 419 LRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIM 478
Query: 1069 PWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1248
PWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCTPKNGEILVAS
Sbjct: 479 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEILVAS 538
Query: 1249 TQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSVL 1428
TQDFLTSS+L+TRKDTFYDRS+F+ +C+++GD D IDLPTPA+VKP ELW+GKQLFS+L
Sbjct: 539 TQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQLFSLL 598
Query: 1429 LRPHAKMRVYLNLTLAEKNYGK------SKETMCPKDGFVYIRNSELISGQLGKATLGNG 1590
LRPHA +VY+NLT+ EK Y K +T+CP DGFVY RN+ELISGQ+GK TLGNG
Sbjct: 599 LRPHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVTLGNG 658
Query: 1591 NKDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTID 1770
NKDGL+SVLLRDY HAAA+CMNRLAKLSARWIGNHGFSIGI+DVQP L K+K T+
Sbjct: 659 NKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKDETLS 718
Query: 1771 KEYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPL 1950
+ Y +C ++I+++ G L+LL GC+ +TLE +ITG LN +R+ VCM+ L+WRNSPL
Sbjct: 719 EGYKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWRNSPL 778
Query: 1951 IMSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSF 2130
IMSQCGSKGSPINI QM+ACVGQQSVGGRRAPNGFLDR+LPHF AK P AKGFV NSF
Sbjct: 779 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFVANSF 838
Query: 2131 YTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIV 2310
Y+GLSATEFFFHTMGGREGLVDTAVKTADTGYMSR+LMK++EDL +HYD TVRNA G IV
Sbjct: 839 YSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAGGSIV 898
Query: 2311 QFMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCP 2418
QF YG DGMDP ME K+G PLNFERLF+K+KA CP
Sbjct: 899 QFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICP 934
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 1141 bits (2951), Expect = 0.0
Identities = 581/879 (66%), Positives = 675/879 (76%), Gaps = 9/879 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
+EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C +CGY+NGMVK+ P
Sbjct: 124 DEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMA-SQRIITCKKCGYLNGMVKKIPA 182
Query: 181 R----IQHDRAKVVDNYLDECQSAISHTKEYRGNAN-VSSTIDPKIAYQLLKNMLDEDCE 345
+ I HDR+K+ +DE ++AISH KE N ++ +DP + L K M D+DCE
Sbjct: 183 QMGIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDKDCE 242
Query: 346 LLYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLE 525
LLY+ RPE LI+T +LVPP++IRPSV V GG+QSNEND++ RLK+IIQ NASL + + +
Sbjct: 243 LLYIAHRPENLIITCMLVPPLSIRPSVMV-GGSQSNENDLSARLKQIIQDNASLHRILSQ 301
Query: 526 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 705
+++ WD +Q EVA+YINS+VRGV ++P+SG +QRLKGKQGRFR NLSGK
Sbjct: 302 PTTSAKNMQVWDTVQSEVAKYINSEVRGVQ-NQPDSKPMSGILQRLKGKQGRFRANLSGK 360
Query: 706 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 885
RVEYTGRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA+
Sbjct: 361 RVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420
Query: 886 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 1065
+R PDG+ +L+ + RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIM HRARI
Sbjct: 421 NVRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRARI 480
Query: 1066 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1245
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA
Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540
Query: 1246 STQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSV 1425
STQDFLTSS+LITRKDTFYDR++FSL+CSYMGD D IDLPTP ++KP ELWTGKQ+FSV
Sbjct: 541 STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDAIDLPTPTVLKPIELWTGKQIFSV 600
Query: 1426 LLRPHAKMRVYLNLTLAEKNYGKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1593
LLRP+A +RVY+ L + EKN+ K ETMC DG+VY RNSELISGQLGKATLGNGN
Sbjct: 601 LLRPNASVRVYVTLNVKEKNFKKGNHGFDETMCTNDGWVYFRNSELISGQLGKATLGNGN 660
Query: 1594 KDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDK 1773
KDGLYS+LLRDYN+HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG EL++++K I
Sbjct: 661 KDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSRQRKDAIQS 720
Query: 1774 EYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLI 1953
Y C IE++ G+L L G + A+TLEA ITG LN IRE T CM L+WRNSPLI
Sbjct: 721 GYDDCHSIIENFNRGNLQLKAGLDGAKTLEAGITGILNTIREDTGKACMDGLHWRNSPLI 780
Query: 1954 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFY 2133
MSQCGSKGSPINI QM+ACVGQQ+V G RAP+GF+DR+LPHF R +K P AKGFV NSFY
Sbjct: 781 MSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFY 840
Query: 2134 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQ 2313
+GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMKALEDL VHYDNTVRNASG I+Q
Sbjct: 841 SGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQ 900
Query: 2314 FMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLS 2493
F YG DGMDPA ME K G PLNF RLF+K +ATCP S
Sbjct: 901 FTYGDDGMDPALMEGKDGAPLNFNRLFLKIQATCPP----------------------RS 938
Query: 2494 KSTTTREEGFAHNFASSSDTPSNKEGCLEAFQNSLRNFI 2610
E + F C +AF SLR+F+
Sbjct: 939 HHNYLSSEELSQKFEEELVRHDKNRVCTDAFVKSLRDFV 977
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 1140 bits (2950), Expect = 0.0
Identities = 569/814 (69%), Positives = 661/814 (81%), Gaps = 8/814 (0%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
+EK + L+KMRN K EPLKK E+ K VVKKC+ MA S+R + C CGY+NGMVK+
Sbjct: 124 DEKLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMA-SQRIITCKNCGYLNGMVKKVAA 182
Query: 181 R-----IQHDRAKVVDNYLDECQSAISHTKEYRGNAN-VSSTIDPKIAYQLLKNMLDEDC 342
+ I HDR+K+ +DE +SAISHT+E G N ++ +DP + L K M D+DC
Sbjct: 183 QMGIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSDKDC 242
Query: 343 ELLYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEML 522
ELLY+ RPE L + + VPP+ RPSV + GGTQSNEND+TER+K+I+Q NAS ++ +
Sbjct: 243 ELLYIAHRPENLFIICMFVPPLPTRPSVRI-GGTQSNENDLTERVKKILQDNASCKKILN 301
Query: 523 ETNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSG 702
+ +++ WD +Q EVAQYINS+VRG+P ++PLSG +QRLKGKQGRFR NLSG
Sbjct: 302 QATTSPKNMQVWDTVQSEVAQYINSEVRGIP-NQPDSKPLSGILQRLKGKQGRFRANLSG 360
Query: 703 KRVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGA 882
KRVEYTGRTVISPDPNLKI +V IPILMARILT+PE VS HNIEKLRQCVRNGPNKYPGA
Sbjct: 361 KRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYPGA 420
Query: 883 KYIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRAR 1062
+ +R PDG+ +L+ + RKR ADEL G IVDRHLE+GD VLFNRQPSLHRMSIM HRAR
Sbjct: 421 RSVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHRAR 480
Query: 1063 IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 1242
IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILV
Sbjct: 481 IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILV 540
Query: 1243 ASTQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFS 1422
ASTQDFLTSSYLITRKDTFYDR++FSL+CSYMGDA D IDLPTP ++KP ELWTGKQ+FS
Sbjct: 541 ASTQDFLTSSYLITRKDTFYDRAAFSLICSYMGDAMDAIDLPTPTILKPIELWTGKQVFS 600
Query: 1423 VLLRPHAKMRVYLNLTLAEKNY--GKSKETMCPKDGFVYIRNSELISGQLGKATLGNGNK 1596
VLLRP+A +RVY+ L + EKN+ GK ETMC DG+VY RNSELISGQLGKATLGNGNK
Sbjct: 601 VLLRPNASVRVYVTLNVKEKNFKKGKYDETMCTNDGWVYFRNSELISGQLGKATLGNGNK 660
Query: 1597 DGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDKE 1776
DGLYSVLLRDYN+HAAA CMNRLAKLSARWIG HGFS+GI+DVQPG EL +E++ I+K
Sbjct: 661 DGLYSVLLRDYNSHAAAVCMNRLAKLSARWIGIHGFSLGIDDVQPGEELREEREKIINKG 720
Query: 1777 YGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLIM 1956
Y C I + G L L G + A++LE+ ITG LN IRE T +CM+ L+WRNSPLIM
Sbjct: 721 YEDCGLKIRDFNEGRLQLKAGLDTAKSLESDITGILNRIREATGKLCMEGLHWRNSPLIM 780
Query: 1957 SQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFYT 2136
SQCGSKGSPINI QM+ACVGQQ+V G RAP+GF+DR+LPHF R +K P+AKGFV NSFY+
Sbjct: 781 SQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKTPEAKGFVANSFYS 840
Query: 2137 GLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQF 2316
GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMKALEDL VHYDNTVRNASG I+QF
Sbjct: 841 GLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQF 900
Query: 2317 MYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCP 2418
YG DGMDP ME K G PLNF+RLF+K +ATCP
Sbjct: 901 TYGDDGMDPVLMEGKDGAPLNFDRLFLKIQATCP 934
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 1139 bits (2945), Expect = 0.0
Identities = 579/879 (65%), Positives = 675/879 (76%), Gaps = 9/879 (1%)
Frame = +1
Query: 1 EEKERQTFLQKMRNTKTEPLKKNEILKNVVKKCNAMAGSKRAVKCSRCGYINGMVKRAPL 180
+EK + L+KMRN + EPLKK E+ K VVKKC+ MA S+R + C +CGY+NGMVK+
Sbjct: 124 DEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMA-SQRIITCKKCGYLNGMVKKIAA 182
Query: 181 R----IQHDRAKVVDNYLDECQSAISHTKEYRGNAN-VSSTIDPKIAYQLLKNMLDEDCE 345
+ I HDR+K+ +DEC+SAISHTK+ N ++ +DP + L K M D+DCE
Sbjct: 183 QFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDKDCE 242
Query: 346 LLYLNDRPEKLIVTNILVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLRQEMLE 525
LLY+ RPE LI+T +LVPP++IRPSV + GG QSNEND+T RLK+II NASL + + +
Sbjct: 243 LLYIAYRPENLIITCMLVPPLSIRPSVMI-GGIQSNENDLTARLKQIILGNASLHKILSQ 301
Query: 526 TNLHNRSLTSWDDLQMEVAQYINSDVRGVPLYMTAARPLSGFVQRLKGKQGRFRGNLSGK 705
+++ WD +Q+EVA+YINS+VRG PLSG +QRLKGK GRFR NLSGK
Sbjct: 302 PTSSPKNMQVWDTVQIEVARYINSEVRGCQ-NQPEEHPLSGILQRLKGKGGRFRANLSGK 360
Query: 706 RVEYTGRTVISPDPNLKINQVAIPILMARILTYPERVSHHNIEKLRQCVRNGPNKYPGAK 885
RVE+TGRTVISPDPNLKI +V IPILMA+ILT+PE VS HNIEKLRQCVRNGPNKYPGA+
Sbjct: 361 RVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYPGAR 420
Query: 886 YIRQPDGTLISLMNNLRKRHADELKYGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARI 1065
+R PDG+ +L+ + RKR ADEL G IVDRHL++GD+VLFNRQPSLHRMSIM HRARI
Sbjct: 421 NVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHRARI 480
Query: 1066 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVA 1245
MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVA
Sbjct: 481 MPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMGVQNNLCTPKNGEILVA 540
Query: 1246 STQDFLTSSYLITRKDTFYDRSSFSLMCSYMGDATDPIDLPTPALVKPQELWTGKQLFSV 1425
STQDFLTSS+LITRKDTFYDR++FSL+CSYMGD D IDLPTP ++KP ELWTGKQ+FSV
Sbjct: 541 STQDFLTSSFLITRKDTFYDRAAFSLICSYMGDGMDSIDLPTPTILKPIELWTGKQIFSV 600
Query: 1426 LLRPHAKMRVYLNLTLAEKNYGKSK----ETMCPKDGFVYIRNSELISGQLGKATLGNGN 1593
LLRP+A +RVY+ L + EKN+ K + ETMC DG+VY RNSELISGQLGKATLGNGN
Sbjct: 601 LLRPNASIRVYVTLNVKEKNFKKGEHGFDETMCINDGWVYFRNSELISGQLGKATLGNGN 660
Query: 1594 KDGLYSVLLRDYNTHAAAACMNRLAKLSARWIGNHGFSIGINDVQPGVELNKEKKVTIDK 1773
KDGLYS+LLRDYN+HAAA CMNRLAKLSARWIG HGFSIGI+DVQPG EL+KE+K +I
Sbjct: 661 KDGLYSILLRDYNSHAAAVCMNRLAKLSARWIGIHGFSIGIDDVQPGEELSKERKDSIQF 720
Query: 1774 EYGQCTDYIESYKSGSLDLLPGCNNAETLEAKITGTLNNIRETTANVCMKNLNWRNSPLI 1953
Y QC IE + G+L L G + A++LEA+ITG LN IRE T CM L+WRNSPLI
Sbjct: 721 GYDQCHRKIEEFNRGNLQLKAGLDGAKSLEAEITGILNTIREATGKACMSGLHWRNSPLI 780
Query: 1954 MSQCGSKGSPINICQMIACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFVQNSFY 2133
MSQCGSKGSPINI QM+ACVGQQ+V G RAP+GF+DR+LPHF R +K P AKGFV NSFY
Sbjct: 781 MSQCGSKGSPINISQMVACVGQQTVNGHRAPDGFIDRSLPHFPRMSKSPAAKGFVANSFY 840
Query: 2134 TGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDNTVRNASGFIVQ 2313
+GL+ATEFFFHTMGGREGLVDTAVKTA TGYMSRRLMKALEDL VHYDNTVRNASG I+Q
Sbjct: 841 SGLTATEFFFHTMGGREGLVDTAVKTASTGYMSRRLMKALEDLLVHYDNTVRNASGCILQ 900
Query: 2314 FMYGGDGMDPAQMEEKSGLPLNFERLFMKTKATCPAIEQKSXXXXXXXXXXXXXXXXRLS 2493
F YG DGMDPA ME K G PLNF RLF+K +ATCP S
Sbjct: 901 FTYGDDGMDPALMEGKDGAPLNFNRLFLKVQATCPP----------------------RS 938
Query: 2494 KSTTTREEGFAHNFASSSDTPSNKEGCLEAFQNSLRNFI 2610
T E + F C +AF SLR F+
Sbjct: 939 HHTYLSSEELSQKFEEELVRHDKSRVCTDAFVKSLREFV 977