BLASTX nr result

ID: Rehmannia23_contig00010019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00010019
         (352 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB12194.1| PHO2 [Nicotiana benthamiana]                            73   4e-11
ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating en...    69   5e-10
ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating en...    65   9e-09

>gb|ACB12194.1| PHO2 [Nicotiana benthamiana]
          Length = 921

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 50/111 (45%), Positives = 64/111 (57%), Gaps = 10/111 (9%)
 Frame = -3

Query: 305 DSSSHSISQVAIGIFTSITSSLFGSLISG----YKCTSEGGQIDGKPPSEEALELCNLNH 138
           +SSS  +SQ AIG F+SITSSLFGSL +     Y+  SE GQ    P  EE +EL NLN 
Sbjct: 544 NSSSCLLSQAAIGSFSSITSSLFGSLSTSLFGTYQAISEEGQESRIPNEEEVIELSNLNA 603

Query: 137 G------GQLLVVEDLEMHEKNVTSLQIKEANEDILLPSSSKHPECFRQFD 3
           G      G +    ++E+ ++  T+    E  +   LPSSSK PE FRQFD
Sbjct: 604 GIPTLEVGYVKASLEMELEQEQETT----EDQKHYALPSSSKLPEDFRQFD 650


>ref|XP_006347038.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum tuberosum]
          Length = 926

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
 Frame = -3

Query: 305 DSSSHSISQVAIGIFTSITSSLFG----SLISGYKCTSEGGQIDGKPPSEEALELCNLNH 138
           DS S  +S+ AIG F+SITSSLFG    SL   Y+  SE GQ       EE +EL +LN 
Sbjct: 551 DSGSCLVSRTAIGFFSSITSSLFGSLSTSLFGAYQTISEEGQKSRIVDEEEVIELSHLNA 610

Query: 137 G----GQLLVVEDLEMHEKNVTSLQIKEANEDILLPSSSKHPECFRQFD 3
           G      L    ++E+ +   T+    E  +D  LPSSSK PE FRQFD
Sbjct: 611 GIPTFEDLKASPEMELEQGQETT----EGQKDDALPSSSKLPEHFRQFD 655


>ref|XP_004232877.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 24-like
           [Solanum lycopersicum]
          Length = 925

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
 Frame = -3

Query: 332 FGLNYDNAK----DSSSHSISQVAIGIFTSITSSLFG----SLISGYKCTSEGGQIDGKP 177
           FG N ++      DS S  IS+ A+G F+SITS+LFG    SL   Y+  SE GQ     
Sbjct: 537 FGSNSESCNESLWDSGSCLISRTAVGFFSSITSTLFGSLSISLFGTYQTISEEGQKSRIV 596

Query: 176 PSEEALELCNLNHG----GQLLVVEDLEMHEKNVTSLQIKEANEDILLPSSSKHPECFRQ 9
             EE +EL +LN G      L    ++E+ +   T+    E  +D  LPSSS  PE F+Q
Sbjct: 597 DEEEVIELSHLNAGIPTFENLKASPEMELEQVQETT----EGQKDDALPSSSNLPEHFKQ 652

Query: 8   FD 3
           FD
Sbjct: 653 FD 654


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