BLASTX nr result

ID: Rehmannia23_contig00007846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00007846
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006444494.1| hypothetical protein CICLE_v10022841mg [Citr...    67   2e-09
ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [V...    63   5e-08
ref|XP_002302764.2| CP12 domain-containing family protein [Popul...    60   4e-07
ref|XP_004495904.1| PREDICTED: calvin cycle protein CP12-2, chlo...    56   6e-06
emb|CAA96569.1| CP12 [Nicotiana tabacum] gi|25990286|gb|AAK49535...    56   6e-06
ref|XP_006355835.1| PREDICTED: calvin cycle protein CP12-1, chlo...    55   1e-05
ref|XP_002515284.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>ref|XP_006444494.1| hypothetical protein CICLE_v10022841mg [Citrus clementina]
           gi|568878722|ref|XP_006492335.1| PREDICTED: calvin cycle
           protein CP12-2, chloroplastic-like [Citrus sinensis]
           gi|557546756|gb|ESR57734.1| hypothetical protein
           CICLE_v10022841mg [Citrus clementina]
          Length = 130

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/68 (45%), Positives = 48/68 (70%)
 Frame = -3

Query: 206 MAAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRVSIRPVAAAPDK 27
           MA +AGV +++  VFA+  D  SK  P +   LN+P ++  A+FR GR+ ++P+ AAPD+
Sbjct: 1   MATIAGVNLSTPSVFAKITDPKSKVQPSRSLWLNNPSRKRPAQFRTGRMHMQPLRAAPDR 60

Query: 26  LSEKVEES 3
           +SEKVE+S
Sbjct: 61  ISEKVEQS 68


>ref|XP_002275043.1| PREDICTED: calvin cycle protein CP12-like [Vitis vinifera]
          Length = 128

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/68 (50%), Positives = 48/68 (70%)
 Frame = -3

Query: 206 MAAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRVSIRPVAAAPDK 27
           MA +AGV++++ +V ARA DS  K   ++   L++PWKR +  F  GR+ +RPVAAAPD 
Sbjct: 1   MATIAGVSLSTPRVLARAADSP-KSQTIQSPWLSNPWKRPS-RFGAGRMCVRPVAAAPDS 58

Query: 26  LSEKVEES 3
           +SEKV ES
Sbjct: 59  ISEKVVES 66


>ref|XP_002302764.2| CP12 domain-containing family protein [Populus trichocarpa]
           gi|118488076|gb|ABK95858.1| unknown [Populus
           trichocarpa] gi|550345406|gb|EEE82037.2| CP12
           domain-containing family protein [Populus trichocarpa]
          Length = 127

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/68 (45%), Positives = 43/68 (63%)
 Frame = -3

Query: 206 MAAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRVSIRPVAAAPDK 27
           MA +AG+ +++ +V A+A D   KP       LN PW+R+      GR+ IRPV AAPD 
Sbjct: 1   MATIAGLNLSTPRVLAKATD---KPKAQALVKLNQPWRRTYHLGSGGRMQIRPVRAAPDS 57

Query: 26  LSEKVEES 3
           +SEKVE+S
Sbjct: 58  ISEKVEKS 65


>ref|XP_004495904.1| PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Cicer
           arietinum]
          Length = 132

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 AAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRV-SIRPVAAAPDK 27
           A +AGVT++S +V  + P+S  K + ++F  +    +R T     GR+ +IRPV AAPD 
Sbjct: 3   ATMAGVTLSSPRVLFKGPESLQKSHAIRFGPVFMLSQRRTGSVSSGRILTIRPVRAAPDS 62

Query: 26  LSEKVEES 3
           +SEKVEES
Sbjct: 63  ISEKVEES 70


>emb|CAA96569.1| CP12 [Nicotiana tabacum] gi|25990286|gb|AAK49535.2| chloroplast
           protein 12 [Nicotiana tabacum]
          Length = 132

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = -3

Query: 206 MAAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRST-AEFRYGRVSIRPVAAAPD 30
           MA++AGV+IT+ ++ ++  DS  K   LKF  LN PWK S+  +F +G++ ++ ++A PD
Sbjct: 1   MASIAGVSITTPRILSKTSDSP-KVQTLKFQSLNKPWKNSSLVQFGHGKLYLKAISATPD 59

Query: 29  -KLSEKVEES 3
            KLS+ V ES
Sbjct: 60  NKLSDLVAES 69


>ref|XP_006355835.1| PREDICTED: calvin cycle protein CP12-1, chloroplastic-like [Solanum
           tuberosum]
          Length = 126

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -3

Query: 206 MAAVAGVTITSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRVSIRPVAAAPD- 30
           MA++AGV+IT+ ++ + +P    K  PLKF  LNSPWK+S  +F YGR+ +      PD 
Sbjct: 1   MASIAGVSITTPRISSDSP----KIQPLKFPTLNSPWKKS-GQFSYGRMYVVVPRVVPDK 55

Query: 29  KLSEKVEES 3
           KLS+ V ES
Sbjct: 56  KLSDLVAES 64


>ref|XP_002515284.1| conserved hypothetical protein [Ricinus communis]
           gi|223545764|gb|EEF47268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = -3

Query: 206 MAAVAGVTI-TSQKVFARAPDSSSKPNPLKFAVLNSPWKRSTAEFRYGRVSIRPVAAAPD 30
           MA +  + I T  +V A+A D+   P       LN+PWKR+  + R  R+ I+PV AAPD
Sbjct: 1   MATLTSLNISTPARVIAKATDA---PKAQPIFKLNNPWKRAGCQLRSQRMQIKPVRAAPD 57

Query: 29  KLSEKVEES 3
            +SEKVEES
Sbjct: 58  SISEKVEES 66


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