BLASTX nr result
ID: Rehmannia23_contig00006958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006958
(660 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS73974.1| hypothetical protein M569_00782, partial [Genlise... 76 8e-12
ref|XP_002523963.1| zinc finger protein, putative [Ricinus commu... 72 1e-10
ref|NP_001152117.1| RHC1A [Zea mays] gi|195652783|gb|ACG45859.1|... 72 1e-10
gb|ACF84253.1| unknown [Zea mays] 72 1e-10
sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligas... 72 2e-10
ref|XP_003574092.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 70 6e-10
ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 68 2e-09
gb|AAL59019.1|AC087182_2 putative zinc finger protein [Oryza sat... 68 2e-09
ref|NP_001064906.2| Os10g0487400 [Oryza sativa Japonica Group] g... 68 2e-09
gb|EAZ16486.1| hypothetical protein OsJ_31957 [Oryza sativa Japo... 68 2e-09
gb|EAY78992.1| hypothetical protein OsI_34100 [Oryza sativa Indi... 68 2e-09
ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citr... 68 3e-09
gb|EMT21882.1| RING finger protein 126 [Aegilops tauschii] 68 3e-09
gb|ACT21194.1| zinc finger protein [Carica papaya] 68 3e-09
gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis] 67 4e-09
ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 67 4e-09
ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [S... 67 4e-09
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|5... 67 4e-09
gb|EMS63398.1| E3 ubiquitin-protein ligase RING1 [Triticum urartu] 67 5e-09
gb|EOX99086.1| RING/U-box superfamily protein, putative [Theobro... 67 6e-09
>gb|EPS73974.1| hypothetical protein M569_00782, partial [Genlisea aurea]
Length = 296
Score = 76.3 bits (186), Expect = 8e-12
Identities = 39/71 (54%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDD--PDYESSGNSGRREVARQSDGYNNXXXXXXXXXXXARTVQ 485
WLELHNSCPVCRYELPTDD D ++ GNS R E + Q++ ++ R VQ
Sbjct: 222 WLELHNSCPVCRYELPTDDAADDRDNRGNSSRTETSSQAEDGDD----------RQRVVQ 271
Query: 484 RRFTIPLPWLF 452
RRFTI LPWLF
Sbjct: 272 RRFTITLPWLF 282
>ref|XP_002523963.1| zinc finger protein, putative [Ricinus communis]
gi|223536690|gb|EEF38331.1| zinc finger protein,
putative [Ricinus communis]
Length = 116
Score = 72.4 bits (176), Expect = 1e-10
Identities = 41/75 (54%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYES------SGNSGRREVARQSDGYNNXXXXXXXXXXXA 497
WLELHNSCPVCRYELPTDD DYES G G EVA + G N
Sbjct: 34 WLELHNSCPVCRYELPTDDSDYESRTRGGAEGGQGSNEVA-GTTGDN------------- 79
Query: 496 RTVQRRFTIPLPWLF 452
RTV+RRF+I LPW F
Sbjct: 80 RTVERRFSISLPWPF 94
>ref|NP_001152117.1| RHC1A [Zea mays] gi|195652783|gb|ACG45859.1| RHC1A [Zea mays]
gi|414870991|tpg|DAA49548.1| TPA: putative RING zinc
finger domain superfamily protein [Zea mays]
Length = 375
Score = 72.4 bits (176), Expect = 1e-10
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRRE---VARQSDGYNNXXXXXXXXXXXARTV 488
WLELHNSCP+CR+ELPTDDPDYE S ++ +A + G + R V
Sbjct: 268 WLELHNSCPICRFELPTDDPDYEVRKGSNSQQAVGIAAAASGSSTAAEGQMERQENPRVV 327
Query: 487 QRRFTIPLPWLF 452
+RRF + LPW F
Sbjct: 328 ERRFNVSLPWPF 339
>gb|ACF84253.1| unknown [Zea mays]
Length = 234
Score = 72.4 bits (176), Expect = 1e-10
Identities = 33/72 (45%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRRE---VARQSDGYNNXXXXXXXXXXXARTV 488
WLELHNSCP+CR+ELPTDDPDYE S ++ +A + G + R V
Sbjct: 127 WLELHNSCPICRFELPTDDPDYEVRKGSNSQQAVGIAAAASGSSTAAEGQMERQENPRVV 186
Query: 487 QRRFTIPLPWLF 452
+RRF + LPW F
Sbjct: 187 ERRFNVSLPWPF 198
>sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
finger protein 1 gi|298155591|gb|ADI58769.1| RING-type
ubiquitin E3 ligase [Gossypium hirsutum]
Length = 338
Score = 71.6 bits (174), Expect = 2e-10
Identities = 40/78 (51%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE---------SSGNSGRREVARQSDGYNNXXXXXXXXX 506
WLELHNSCPVCR+ELPTDDPDYE S GN G ++SDG N
Sbjct: 254 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGNDGDNS-GQRSDGDN---------- 302
Query: 505 XXARTVQRRFTIPLPWLF 452
RTV+R F I LPW F
Sbjct: 303 ---RTVERSFRISLPWPF 317
>ref|XP_003574092.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 366
Score = 70.1 bits (170), Expect = 6e-10
Identities = 38/86 (44%), Positives = 44/86 (51%), Gaps = 17/86 (19%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE-----------------SSGNSGRREVARQSDGYNNX 530
WLELHNSCP+CR+ELPTDDPDYE +SGNS E R+ G
Sbjct: 263 WLELHNSCPICRFELPTDDPDYEGNKTSNPQPAVGIASAAASGNSSAAEEGREETG---- 318
Query: 529 XXXXXXXXXXARTVQRRFTIPLPWLF 452
AR V+RRF + LPW F
Sbjct: 319 --------ETARVVERRFNVSLPWPF 336
>ref|XP_004982780.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 393
Score = 68.2 bits (165), Expect = 2e-09
Identities = 35/75 (46%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNS------GRREVARQSDGYNNXXXXXXXXXXXA 497
WLELHNSCP+CR+ELPTDDPDYE S G A S + A
Sbjct: 283 WLELHNSCPICRFELPTDDPDYEGRKASNPQPPVGIAAAAAPSGSSTSAEGRMEEREENA 342
Query: 496 RTVQRRFTIPLPWLF 452
R V+RRF + LPW F
Sbjct: 343 RVVERRFNVSLPWPF 357
>gb|AAL59019.1|AC087182_2 putative zinc finger protein [Oryza sativa Japonica Group]
gi|31432769|gb|AAP54362.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|215734849|dbj|BAG95571.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 370
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREV----ARQSDGYNNXXXXXXXXXXXART 491
WL+LHNSCP+CR+ELPTDDPDYE S + A + G + AR
Sbjct: 266 WLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAGVDAGAASGSSTAAEEREESGESARL 325
Query: 490 VQRRFTIPLPWLF 452
V+RRF + LPW F
Sbjct: 326 VERRFNVSLPWPF 338
>ref|NP_001064906.2| Os10g0487400 [Oryza sativa Japonica Group]
gi|255679510|dbj|BAF26820.2| Os10g0487400 [Oryza sativa
Japonica Group]
Length = 304
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREV----ARQSDGYNNXXXXXXXXXXXART 491
WL+LHNSCP+CR+ELPTDDPDYE S + A + G + AR
Sbjct: 200 WLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAGVDAGAASGSSTAAEEREESGESARL 259
Query: 490 VQRRFTIPLPWLF 452
V+RRF + LPW F
Sbjct: 260 VERRFNVSLPWPF 272
>gb|EAZ16486.1| hypothetical protein OsJ_31957 [Oryza sativa Japonica Group]
Length = 336
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREV----ARQSDGYNNXXXXXXXXXXXART 491
WL+LHNSCP+CR+ELPTDDPDYE S + A + G + AR
Sbjct: 232 WLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAGVDAGAASGSSTAAEEREESGESARL 291
Query: 490 VQRRFTIPLPWLF 452
V+RRF + LPW F
Sbjct: 292 VERRFNVSLPWPF 304
>gb|EAY78992.1| hypothetical protein OsI_34100 [Oryza sativa Indica Group]
Length = 370
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREV----ARQSDGYNNXXXXXXXXXXXART 491
WL+LHNSCP+CR+ELPTDDPDYE S + A + G + AR
Sbjct: 266 WLDLHNSCPICRFELPTDDPDYEGRKKSNPQPTAGVDAGAASGSSTAAEEREESGESARL 325
Query: 490 VQRRFTIPLPWLF 452
V+RRF + LPW F
Sbjct: 326 VERRFNVSLPWPF 338
>ref|XP_006441411.1| hypothetical protein CICLE_v10020902mg [Citrus clementina]
gi|557543673|gb|ESR54651.1| hypothetical protein
CICLE_v10020902mg [Citrus clementina]
Length = 350
Score = 67.8 bits (164), Expect = 3e-09
Identities = 38/84 (45%), Positives = 39/84 (46%), Gaps = 15/84 (17%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE------SSGNSGRREVARQS---------DGYNNXXX 524
WLELHNSCPVCRYELPTDDPDYE NS QS G
Sbjct: 227 WLELHNSCPVCRYELPTDDPDYEQRRNGNGDNNSNNNNSMNQSFNLGFGFGGGGSGGNDG 286
Query: 523 XXXXXXXXARTVQRRFTIPLPWLF 452
RTV+RR I LPW F
Sbjct: 287 ESGGNAETPRTVERRLRISLPWPF 310
>gb|EMT21882.1| RING finger protein 126 [Aegilops tauschii]
Length = 336
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/75 (46%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNS------GRREVARQSDGYNNXXXXXXXXXXXA 497
WLELHNSCP+CR+ELPTDDPDYE + S G A S A
Sbjct: 226 WLELHNSCPICRFELPTDDPDYEGNKASNPQSAVGIAAAAAASGSSGAAEEGGEESGETA 285
Query: 496 RTVQRRFTIPLPWLF 452
R V+RRF + LPW F
Sbjct: 286 RVVERRFNVSLPWPF 300
>gb|ACT21194.1| zinc finger protein [Carica papaya]
Length = 340
Score = 67.8 bits (164), Expect = 3e-09
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGR---REVARQSDGYN---NXXXXXXXXXXXA 497
WLELHNSCPVCRYELPTDD DYE + R + V+ +D N +
Sbjct: 229 WLELHNSCPVCRYELPTDDADYEHRTRANRTPAQNVSGSTDAVNAVADGNAGNRDNPETP 288
Query: 496 RTVQRRFTIPLPWLF 452
R+V+RRF I LPW F
Sbjct: 289 RSVERRFRIFLPWPF 303
>gb|EXC35976.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
Length = 378
Score = 67.4 bits (163), Expect = 4e-09
Identities = 41/87 (47%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREVARQSD---GYN---------------N 533
WLELHNSCPVCRYELPTDDPDYE N G A QS G+N
Sbjct: 249 WLELHNSCPVCRYELPTDDPDYEQR-NRGTSTPANQSQAAGGFNISVGGGSINAVGDGSG 307
Query: 532 XXXXXXXXXXXARTVQRRFTIPLPWLF 452
R V+RRFTI LP LF
Sbjct: 308 SGATSGENPQTPRMVERRFTISLPQLF 334
>ref|XP_006493415.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
Length = 352
Score = 67.4 bits (163), Expect = 4e-09
Identities = 38/86 (44%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE--------SSGNSGRREVARQS---------DGYNNX 530
WLELHNSCPVCRYELPTDDPDYE + NS QS G
Sbjct: 227 WLELHNSCPVCRYELPTDDPDYEQRRNGNGNGNNNSNNNNSMNQSFNLGFGFGGGGSGGN 286
Query: 529 XXXXXXXXXXARTVQRRFTIPLPWLF 452
RTV+RR I LPW F
Sbjct: 287 DGESGGNAETPRTVERRLRISLPWPF 312
>ref|XP_002467049.1| hypothetical protein SORBIDRAFT_01g018800 [Sorghum bicolor]
gi|241920903|gb|EER94047.1| hypothetical protein
SORBIDRAFT_01g018800 [Sorghum bicolor]
Length = 398
Score = 67.4 bits (163), Expect = 4e-09
Identities = 34/76 (44%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNS-------GRREVARQSDGYNNXXXXXXXXXXX 500
WLELHNSCP+CR+ELPTDDPDYE S G A S
Sbjct: 287 WLELHNSCPICRFELPTDDPDYEGRKGSNPPQPAVGIAAAAAASGSSTAADGQMEERQDN 346
Query: 499 ARTVQRRFTIPLPWLF 452
R V+RRF + LPW F
Sbjct: 347 PRVVERRFNVSLPWPF 362
>ref|XP_002329726.1| predicted protein [Populus trichocarpa]
gi|566206023|ref|XP_006374275.1| hypothetical protein
POPTR_0015s05600g [Populus trichocarpa]
gi|118486397|gb|ABK95038.1| unknown [Populus
trichocarpa] gi|550322032|gb|ERP52072.1| hypothetical
protein POPTR_0015s05600g [Populus trichocarpa]
Length = 345
Score = 67.4 bits (163), Expect = 4e-09
Identities = 35/73 (47%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYESSGNSGRREVARQSDGYNNXXXXXXXXXXXARTVQ-- 485
WLELHNSCPVCRYELPTDD DYE +G V + G N Q
Sbjct: 230 WLELHNSCPVCRYELPTDDQDYEQRKGNGSNGVNQNVGGGINSGGSISDGDNSDGNAQTP 289
Query: 484 --RRFTIPLPWLF 452
RRF IP PW F
Sbjct: 290 RERRFRIPFPWPF 302
>gb|EMS63398.1| E3 ubiquitin-protein ligase RING1 [Triticum urartu]
Length = 228
Score = 67.0 bits (162), Expect = 5e-09
Identities = 37/89 (41%), Positives = 44/89 (49%), Gaps = 20/89 (22%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE--------------------SSGNSGRREVARQSDGY 539
WLELHNSCP+CR+ELPTDDPDYE +SG+SG E + G
Sbjct: 116 WLELHNSCPICRFELPTDDPDYEGNKASNPQSAVGIAAAAAAAASGSSGAAEEGGEESG- 174
Query: 538 NNXXXXXXXXXXXARTVQRRFTIPLPWLF 452
AR V+RRF + LPW F
Sbjct: 175 -----------ETARVVERRFNVSLPWPF 192
>gb|EOX99086.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 343
Score = 66.6 bits (161), Expect = 6e-09
Identities = 39/82 (47%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Frame = -3
Query: 658 WLELHNSCPVCRYELPTDDPDYE---------SSGN----SGRREVARQSDGYNNXXXXX 518
WLELHNSCPVCR+ELPTDDPDYE GN SG + ++S G N
Sbjct: 254 WLELHNSCPVCRHELPTDDPDYERRVRGAQGTGGGNDGEGSGGGDSGQRSAGDN------ 307
Query: 517 XXXXXXARTVQRRFTIPLPWLF 452
RTV+R F I LPW F
Sbjct: 308 -------RTVERSFRISLPWPF 322