BLASTX nr result
ID: Rehmannia23_contig00006911
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006911
(687 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606... 115 1e-23
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li... 112 8e-23
ref|XP_002325451.1| DNA polymerase delta subunit 4 family protei... 112 8e-23
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei... 111 2e-22
gb|ABK93288.1| unknown [Populus trichocarpa] 111 2e-22
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608... 110 4e-22
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr... 110 4e-22
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr... 108 1e-21
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm... 108 1e-21
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi... 108 2e-21
gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus pe... 107 3e-21
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis th... 105 1e-20
gb|AAM65969.1| unknown [Arabidopsis thaliana] 105 1e-20
ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Caps... 105 2e-20
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209... 105 2e-20
gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis] 104 2e-20
ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [A... 103 7e-20
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263... 100 4e-19
emb|CBI26425.3| unnamed protein product [Vitis vinifera] 100 4e-19
emb|CAN77903.1| hypothetical protein VITISV_024389 [Vitis vinifera] 100 4e-19
>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
Length = 120
Score = 115 bits (289), Expect = 1e-23
Identities = 57/116 (49%), Positives = 68/116 (58%)
Frame = +3
Query: 51 SHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSXXXXXXXXXXXX 230
S MKGF+ A GS+V QPPAL+SHGS
Sbjct: 5 SSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPPALISHGSLDLKDSYDQNEE 64
Query: 231 VLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDGRV 398
VLRQFDMNM YGPCLGM+RLDRW RA LG++PP ++E LL ++ V +ECLWDGRV
Sbjct: 65 VLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPTDVERLLRSNKVRNECLWDGRV 120
>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
lycopersicum]
Length = 120
Score = 112 bits (281), Expect = 8e-23
Identities = 56/116 (48%), Positives = 67/116 (57%)
Frame = +3
Query: 51 SHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSXXXXXXXXXXXX 230
S MKGF+ A GS+V QP AL+SHGS
Sbjct: 5 SSMKGFYKQQKKSGGITKPSKSKSTKPKNAAAIGSNVTQPSALISHGSLDLKDNYDQNEE 64
Query: 231 VLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDGRV 398
VLRQFDMNM YGPCLGM+RLDRW RA LG++PP ++E LL ++ V +ECLWDGRV
Sbjct: 65 VLRQFDMNMVYGPCLGMNRLDRWERAKKLGMNPPADVERLLRSNKVRNECLWDGRV 120
>ref|XP_002325451.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|222862326|gb|EEE99832.1| DNA polymerase delta subunit
4 family protein [Populus trichocarpa]
Length = 121
Score = 112 bits (281), Expect = 8e-23
Identities = 60/115 (52%), Positives = 64/115 (55%)
Frame = +3
Query: 48 ASHMKGFFXXXXXXXXXXXXXXXXXXXXXXXATCGSDVVQPPALVSHGSXXXXXXXXXXX 227
+S MKGF+ AT GSD+ QP ALVSH S
Sbjct: 5 SSSMKGFYRQKKNKSGIRKPTSTSKSSLIHAATLGSDITQPTALVSHDSPDLKDDYDKHE 64
Query: 228 XVLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPPKEIENLLGASIVNSECLWDG 392
VLRQFDMN AYGPCLGMSRL RW RA LGL+PPKEIE LL V SECLWDG
Sbjct: 65 DVLRQFDMNPAYGPCLGMSRLARWERAQRLGLNPPKEIEGLLKGEKVRSECLWDG 119
>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|118488437|gb|ABK96033.1| unknown [Populus
trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
delta subunit 4 family protein [Populus trichocarpa]
Length = 122
Score = 111 bits (278), Expect = 2e-22
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A+ GSD+ QP A VSHGS +LRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 37 ASLGSDITQPTAQVSHGSPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PP E E LL A +V SEC WDGRV
Sbjct: 97 LNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 111 bits (278), Expect = 2e-22
Identities = 54/86 (62%), Positives = 59/86 (68%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A+ GSD+ QP A VSHGS +LRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 37 ASLGSDITQPTAQVSHGSPDHKDYYDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PP E E LL A +V SEC WDGRV
Sbjct: 97 LNPPNEFEGLLKAEMVQSECWWDGRV 122
>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
Length = 122
Score = 110 bits (275), Expect = 4e-22
Identities = 55/86 (63%), Positives = 60/86 (69%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSDV QP AL+SHGS VLRQFDMNMAYGPC+GMSRL RW RA LG
Sbjct: 37 ATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKEIE LL V +ECLW+ RV
Sbjct: 97 LNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
gi|557539593|gb|ESR50637.1| hypothetical protein
CICLE_v10033086mg [Citrus clementina]
Length = 122
Score = 110 bits (275), Expect = 4e-22
Identities = 55/86 (63%), Positives = 60/86 (69%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSDV QP AL+SHGS VLRQFDMNMAYGPC+GMSRL RW RA LG
Sbjct: 37 ATFGSDVTQPTALISHGSLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKEIE LL V +ECLW+ RV
Sbjct: 97 LNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
gi|557095301|gb|ESQ35883.1| hypothetical protein
EUTSA_v10009118mg [Eutrema salsugineum]
Length = 124
Score = 108 bits (271), Expect = 1e-21
Identities = 52/86 (60%), Positives = 58/86 (67%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSD QP AL+SHGS +LRQFDMNMAYGPCLGM+RLDRW RA LG
Sbjct: 39 ATQGSDATQPAALISHGSLDLNDAYDKEEEMLRQFDMNMAYGPCLGMTRLDRWERALRLG 98
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPSEIERLLKTEKVQQDCLWQGRV 124
>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
gi|223536760|gb|EEF38401.1| delta DNA polymerase,
putative [Ricinus communis]
Length = 126
Score = 108 bits (271), Expect = 1e-21
Identities = 53/87 (60%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHG-SXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANAL 317
A GS++ QP AL+SHG + VLRQFDMNMAYGPCLGM+R+ RW RA L
Sbjct: 40 AAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQRL 99
Query: 318 GLHPPKEIENLLGASIVNSECLWDGRV 398
GL+PPK+IE+LL VNSECLWDGRV
Sbjct: 100 GLNPPKQIEDLLKGGKVNSECLWDGRV 126
>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
subunit 4 family [Arabidopsis lyrata subsp. lyrata]
Length = 122
Score = 108 bits (269), Expect = 2e-21
Identities = 51/86 (59%), Positives = 59/86 (68%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A GSDV+QP AL+SHGS +LRQFDMN+AYGPCLGM+RLDRW RA LG
Sbjct: 37 AAQGSDVIQPAALISHGSLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERALRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
++PP EIE LL V +CLW GRV
Sbjct: 97 MNPPNEIEKLLKTGKVQQDCLWQGRV 122
>gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus persica]
Length = 128
Score = 107 bits (268), Expect = 3e-21
Identities = 51/86 (59%), Positives = 61/86 (70%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A+ GSDV QP AL+SH S +LRQFDMNMAYGPC+GM+RL+RW RA LG
Sbjct: 43 ASFGSDVTQPTALMSHASLDLKDDYDEQEALLRQFDMNMAYGPCVGMTRLERWERACILG 102
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKE+E+LL V ECLWDGR+
Sbjct: 103 LNPPKEVESLLTGGKVCCECLWDGRI 128
>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
delta subunit 4 [Arabidopsis thaliana]
Length = 124
Score = 105 bits (262), Expect = 1e-20
Identities = 50/86 (58%), Positives = 57/86 (66%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A GSDV QP AL+SHGS +LRQFDMN+ YGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLG 98
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 105 bits (262), Expect = 1e-20
Identities = 50/86 (58%), Positives = 57/86 (66%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A GSDV QP AL+SHGS +LRQFDMN+ YGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAVRLG 98
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_006304299.1| hypothetical protein CARUB_v10010654mg [Capsella rubella]
gi|482573010|gb|EOA37197.1| hypothetical protein
CARUB_v10010654mg [Capsella rubella]
Length = 124
Score = 105 bits (261), Expect = 2e-20
Identities = 50/86 (58%), Positives = 58/86 (67%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A GSDV QP AL+SHGS +LRQFDM++AYGPCLGM+RLDRW RA LG
Sbjct: 39 AAQGSDVTQPAALISHGSIDLNGDYGKEEEMLRQFDMDIAYGPCLGMTRLDRWERALRLG 98
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
++PP EIE LL V +CLW GRV
Sbjct: 99 MNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
gi|449523375|ref|XP_004168699.1| PREDICTED:
uncharacterized protein LOC101228956 [Cucumis sativus]
Length = 125
Score = 105 bits (261), Expect = 2e-20
Identities = 52/86 (60%), Positives = 58/86 (67%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
A+ GSD VQP ALVSHGS LRQFDMN AYGPCLGM+R+ RW RA +LG
Sbjct: 40 ASLGSDAVQPAALVSHGSLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLG 99
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPK+I LL A V ECLWD RV
Sbjct: 100 LNPPKDIGTLLKAGKVQLECLWDSRV 125
>gb|EXB29122.1| DNA polymerase delta subunit 4 [Morus notabilis]
Length = 122
Score = 104 bits (260), Expect = 2e-20
Identities = 50/87 (57%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSD+ QPPAL+S+ S VLRQFDMNMAYGPCLGMSRL RW RA+ LG
Sbjct: 36 ATLGSDITQPPALLSNSSPDLRDEYDKEEEVLRQFDMNMAYGPCLGMSRLTRWERASVLG 95
Query: 321 LHPPKEIEN-LLGASIVNSECLWDGRV 398
L+PP+++ + LL A S CLW+GR+
Sbjct: 96 LNPPQQVHHLLLKAPTARSHCLWEGRI 122
>ref|XP_006878656.1| hypothetical protein AMTR_s00011p00265890 [Amborella trichopoda]
gi|548831999|gb|ERM94801.1| hypothetical protein
AMTR_s00011p00265890 [Amborella trichopoda]
Length = 119
Score = 103 bits (256), Expect = 7e-20
Identities = 45/82 (54%), Positives = 58/82 (70%)
Frame = +3
Query: 153 SDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALGLHPP 332
SD QPPAL+SHGS VLR+FDMNM+YGPC+G++RL+RW RAN LG++PP
Sbjct: 38 SDPAQPPALLSHGSIDIKRDFDQCEEVLRRFDMNMSYGPCIGLTRLERWERANKLGMNPP 97
Query: 333 KEIENLLGASIVNSECLWDGRV 398
K++E LL +CLW+GRV
Sbjct: 98 KDVETLLKGGNAGLDCLWEGRV 119
>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
Length = 122
Score = 100 bits (249), Expect = 4e-19
Identities = 52/86 (60%), Positives = 56/86 (65%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSDVVQP L +H VLRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 39 ATLGSDVVQPSTLSAHN--LQDDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKEIE LL ++CLWDG V
Sbjct: 97 LNPPKEIETLLKQGKARADCLWDGCV 122
>emb|CBI26425.3| unnamed protein product [Vitis vinifera]
Length = 117
Score = 100 bits (249), Expect = 4e-19
Identities = 52/86 (60%), Positives = 56/86 (65%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSDVVQP L +H VLRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 34 ATLGSDVVQPSTLSAHN--LQDDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLG 91
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKEIE LL ++CLWDG V
Sbjct: 92 LNPPKEIETLLKQGKARADCLWDGCV 117
>emb|CAN77903.1| hypothetical protein VITISV_024389 [Vitis vinifera]
Length = 122
Score = 100 bits (249), Expect = 4e-19
Identities = 52/86 (60%), Positives = 56/86 (65%)
Frame = +3
Query: 141 ATCGSDVVQPPALVSHGSXXXXXXXXXXXXVLRQFDMNMAYGPCLGMSRLDRWNRANALG 320
AT GSDVVQP L +H VLRQFDMNMAYGPCLGMSRL RW RA LG
Sbjct: 39 ATLGSDVVQPSTLSAHN--LQDDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERAQRLG 96
Query: 321 LHPPKEIENLLGASIVNSECLWDGRV 398
L+PPKEIE LL ++CLWDG V
Sbjct: 97 LNPPKEIETLLKQGKARADCLWDGCV 122