BLASTX nr result
ID: Rehmannia23_contig00006906
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006906
(484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245736.1| PREDICTED: thylakoid lumenal protein At1g122... 99 8e-19
ref|XP_004245735.1| PREDICTED: thylakoid lumenal protein At1g122... 99 8e-19
ref|XP_006355493.1| PREDICTED: thylakoid lumenal protein At1g122... 97 2e-18
ref|XP_006440376.1| hypothetical protein CICLE_v10021545mg [Citr... 89 5e-16
ref|XP_006477250.1| PREDICTED: thylakoid lumenal protein At1g122... 89 6e-16
ref|XP_002532572.1| conserved hypothetical protein [Ricinus comm... 82 7e-14
ref|XP_002303521.1| thylakoid lumenal family protein [Populus tr... 80 2e-13
ref|XP_004511661.1| PREDICTED: thylakoid lumenal protein At1g122... 80 4e-13
ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250... 77 2e-12
gb|AFK40674.1| unknown [Lotus japonicus] 77 2e-12
gb|EOY24427.1| Pentapeptide repeat-containing protein isoform 2 ... 76 4e-12
emb|CBI31881.3| unnamed protein product [Vitis vinifera] 75 7e-12
ref|XP_006590551.1| PREDICTED: thylakoid lumenal protein At1g122... 74 2e-11
ref|XP_006590552.1| PREDICTED: thylakoid lumenal protein At1g122... 74 2e-11
gb|ESW29325.1| hypothetical protein PHAVU_002G061100g [Phaseolus... 74 2e-11
gb|AGV54388.1| thylakoid lumenal protein [Phaseolus vulgaris] 74 2e-11
gb|EOY24426.1| Pentapeptide repeat-containing protein isoform 1 ... 74 3e-11
ref|XP_003611269.1| Thylakoid lumenal protein [Medicago truncatu... 70 2e-10
ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatu... 70 2e-10
emb|CBI31882.3| unnamed protein product [Vitis vinifera] 69 5e-10
>ref|XP_004245736.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
isoform 2 [Solanum lycopersicum]
Length = 309
Score = 98.6 bits (244), Expect = 8e-19
Identities = 59/99 (59%), Positives = 72/99 (72%)
Frame = +3
Query: 186 KMAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKK 365
KMA+ SISLLP+KSIN ISS+SI + IP K + CQ+E NS E K WK
Sbjct: 45 KMALNSISLLPIKSIN-ISSSSI---RYYKVFIPQKSSKIVCQVEKSNSNIEI--KKWKA 98
Query: 366 FVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
VST+LAAAV+ FS+ N++AMA+LNKFEA+TRGEFGIGS
Sbjct: 99 IVSTALAAAVITFSS-NMAAMADLNKFEADTRGEFGIGS 136
>ref|XP_004245735.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
isoform 1 [Solanum lycopersicum]
Length = 329
Score = 98.6 bits (244), Expect = 8e-19
Identities = 59/99 (59%), Positives = 72/99 (72%)
Frame = +3
Query: 186 KMAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKK 365
KMA+ SISLLP+KSIN ISS+SI + IP K + CQ+E NS E K WK
Sbjct: 45 KMALNSISLLPIKSIN-ISSSSI---RYYKVFIPQKSSKIVCQVEKSNSNIEI--KKWKA 98
Query: 366 FVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
VST+LAAAV+ FS+ N++AMA+LNKFEA+TRGEFGIGS
Sbjct: 99 IVSTALAAAVITFSS-NMAAMADLNKFEADTRGEFGIGS 136
>ref|XP_006355493.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
[Solanum tuberosum]
Length = 264
Score = 97.4 bits (241), Expect = 2e-18
Identities = 58/98 (59%), Positives = 70/98 (71%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKKF 368
MA+ SISLLP+KSIN ISS+S + IP K + CQ+E NS E K WK
Sbjct: 1 MALNSISLLPIKSIN-ISSSST---CYYKVFIPQKSSKIVCQVEKSNSNREV--KKWKAI 54
Query: 369 VSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
VST+LAAAV+ FS+ N++AMA+LNKFEAETRGEFGIGS
Sbjct: 55 VSTALAAAVITFSS-NMTAMADLNKFEAETRGEFGIGS 91
>ref|XP_006440376.1| hypothetical protein CICLE_v10021545mg [Citrus clementina]
gi|557542638|gb|ESR53616.1| hypothetical protein
CICLE_v10021545mg [Citrus clementina]
Length = 282
Score = 89.4 bits (220), Expect = 5e-16
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 14/112 (12%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEP------ 350
MA++SIS L +KS+N SS+S L++L SKP V CQ+ + P
Sbjct: 1 MALSSISPLSIKSLNFCSSSSKGPYQLHAL---SKPLWVACQISSKTESEGQFPDCSNNQ 57
Query: 351 --------KNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
KNW+ FVST+LAAAVVA + NISA+A+LNK+EAETRGEFGIGS
Sbjct: 58 CAGPYAKLKNWRVFVSTALAAAVVASCSSNISALADLNKYEAETRGEFGIGS 109
>ref|XP_006477250.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
[Citrus sinensis]
Length = 282
Score = 89.0 bits (219), Expect = 6e-16
Identities = 55/112 (49%), Positives = 70/112 (62%), Gaps = 14/112 (12%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEP------ 350
MA++SIS L +KS+N SS+S L++L SKP V CQ+ + P
Sbjct: 1 MALSSISPLSIKSLNFCSSSSKGPYQLHAL---SKPLWVACQISSKTESDGQFPDCSNNQ 57
Query: 351 --------KNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
KNW+ FVST+LAAAVVA + NISA+A+LNK+EAETRGEFGIGS
Sbjct: 58 CAGPYAKLKNWRVFVSTALAAAVVASCSSNISALADLNKYEAETRGEFGIGS 109
>ref|XP_002532572.1| conserved hypothetical protein [Ricinus communis]
gi|223527699|gb|EEF29806.1| conserved hypothetical
protein [Ricinus communis]
Length = 280
Score = 82.0 bits (201), Expect = 7e-14
Identities = 51/110 (46%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSK----------- 335
MA TSIS L +KS+N S+S R+ L SKPF + CQL T
Sbjct: 1 MAFTSISPLSIKSVNISPSSS---RSPYHLPSQSKPFHILCQLATEREDRILDCSTTRYK 57
Query: 336 -HETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
H ++PKNW+ VST+LAAA + A A+LNKFEAE RGEFGIGS
Sbjct: 58 VHHSKPKNWRTLVSTALAAAAAVNLGFGLPAAADLNKFEAELRGEFGIGS 107
>ref|XP_002303521.1| thylakoid lumenal family protein [Populus trichocarpa]
gi|222840953|gb|EEE78500.1| thylakoid lumenal family
protein [Populus trichocarpa]
Length = 275
Score = 80.5 bits (197), Expect = 2e-13
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 12/110 (10%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSK---------HE 341
MA TSIS + +KS N S P R L+ SKPF + QL+T +E
Sbjct: 1 MAFTSISSMSIKSPN----ISTPHRILSL----SKPFRIAYQLDTERGNQFADCSKNGYE 52
Query: 342 TEP---KNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
E KNW + VST+L AA ++FS+ N+ A+A+LN+FEAETRGEFGIGS
Sbjct: 53 VETAKAKNWARVVSTTLVAAAISFSSCNLPAVADLNRFEAETRGEFGIGS 102
>ref|XP_004511661.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
[Cicer arietinum]
Length = 269
Score = 79.7 bits (195), Expect = 4e-13
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKKF 368
MA+ S+S L + S++ S+ + N+L SK + C++ NS H E K W K
Sbjct: 1 MALNSLSPLSINSLHVSSNYRSTSKISNTLHFHSKSSPIVCKINL-NSDHPQETKKWGKL 59
Query: 369 VSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
S +LAAAV+ FS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 60 FSATLAAAVIVFSS-DLSALADLNKFEAEIRGEFGIGS 96
>ref|XP_002265958.2| PREDICTED: uncharacterized protein LOC100250522 isoform 2 [Vitis
vinifera]
Length = 596
Score = 77.4 bits (189), Expect = 2e-12
Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Frame = +3
Query: 120 LPSFCPSVCLHLQPSIGKTRNLKMAMTSI-SLLPLKSINGISSTSIPDRTLNSLCIPSKP 296
LP F P+ G+ L + +T + + L S++ + + P N L PSKP
Sbjct: 313 LPLFLPT---------GQRHQLNLYLTLFGTAMALSSVSPLYISKSP----NHLQSPSKP 359
Query: 297 FSVTCQLETPNSKH---ETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGE 467
F+V C++E + E K W++ VST+LAAAVV S + + A+A+LNK+EAETRGE
Sbjct: 360 FTVVCRIELQRGNYCRANAESKKWQRLVSTALAAAVVTLSPV-MPAVADLNKYEAETRGE 418
Query: 468 FGIGS 482
FGIGS
Sbjct: 419 FGIGS 423
Score = 69.3 bits (168), Expect = 5e-10
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Frame = +3
Query: 213 LPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKH-----ETEPKNWKKFVST 377
+ L S++ + + P+ L SL SKPF+V C++E + E K W++ VST
Sbjct: 1 MALSSVSPLYISKSPNH-LRSL---SKPFTVVCRIERQRENNWRGEANAESKKWQRLVST 56
Query: 378 SLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
+LAAAVV S + + A+A+LNK+E ETRGEFGIGS
Sbjct: 57 ALAAAVVTLSPV-MPAVADLNKYEVETRGEFGIGS 90
>gb|AFK40674.1| unknown [Lotus japonicus]
Length = 273
Score = 77.0 bits (188), Expect = 2e-12
Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTL-NSLCI-PSKPFSVTCQLETPNSKHETEPKNWK 362
MA+ S+S L + +IN + +S P L NSL P V CQ+ + N H E K W
Sbjct: 2 MALNSLSPLSI-NINSLHVSSRPTSELSNSLHFHPKSSPIVLCQMNS-NRDHPQESKKWG 59
Query: 363 KFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
K VS +LAAAV+AFS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 60 KLVSATLAAAVIAFSS-DMSALADLNKFEAEIRGEFGIGS 98
>gb|EOY24427.1| Pentapeptide repeat-containing protein isoform 2 [Theobroma cacao]
Length = 280
Score = 76.3 bits (186), Expect = 4e-12
Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 13/111 (11%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETP----------NSKH 338
MA+ S+S L + S++ S + P L S K F V CQ+ P N+K+
Sbjct: 1 MALASVSSLSINSLSISSPSKAPCYHLQSFL---KRFGVFCQINNPEIKAQIRDCSNNKY 57
Query: 339 ---ETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
+ + K+W+ VST+LAAA+VAF + ++SA+AELNK+EAETRGEFGIGS
Sbjct: 58 AVTDAKFKSWRALVSTALAAAMVAFGS-DMSALAELNKYEAETRGEFGIGS 107
>emb|CBI31881.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Frame = +3
Query: 270 NSLCIPSKPFSVTCQLETPNSKH---ETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELN 440
N L PSKPF+V C++E + E K W++ VST+LAAAVV S + + A+A+LN
Sbjct: 16 NHLQSPSKPFTVVCRIELQRGNYCRANAESKKWQRLVSTALAAAVVTLSPV-MPAVADLN 74
Query: 441 KFEAETRGEFGIGS 482
K+EAETRGEFGIGS
Sbjct: 75 KYEAETRGEFGIGS 88
>ref|XP_006590551.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
isoform X1 [Glycine max]
Length = 266
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/98 (46%), Positives = 63/98 (64%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKKF 368
MA+ S+S L + S++ SS++ +S P V CQ+ + N H E W K
Sbjct: 2 MALNSLSPLSINSLHVSSSSTSKISHSHSKSFPV----VVCQINS-NRDHRQESTKWGKV 56
Query: 369 VSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
VS +LAAAV+AFS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 57 VSATLAAAVIAFSS-DMSALADLNKFEAEMRGEFGIGS 93
>ref|XP_006590552.1| PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic-like
isoform X2 [Glycine max] gi|255638223|gb|ACU19425.1|
unknown [Glycine max]
Length = 199
Score = 74.3 bits (181), Expect = 2e-11
Identities = 46/98 (46%), Positives = 63/98 (64%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHETEPKNWKKF 368
MA+ S+S L + S++ SS++ +S P V CQ+ + N H E W K
Sbjct: 2 MALNSLSPLSINSLHVSSSSTSKISHSHSKSFPV----VVCQINS-NRDHRQESTKWGKV 56
Query: 369 VSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
VS +LAAAV+AFS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 57 VSATLAAAVIAFSS-DMSALADLNKFEAEMRGEFGIGS 93
>gb|ESW29325.1| hypothetical protein PHAVU_002G061100g [Phaseolus vulgaris]
Length = 280
Score = 73.9 bits (180), Expect = 2e-11
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
Frame = +3
Query: 189 MAMTSISLLPLKS--INGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHE------- 341
MA+ S+S L + S ++ S++ I D SKPF+V+CQL + E
Sbjct: 2 MALNSLSPLSVNSLLVSSSSASMISDSH-------SKPFAVSCQLNSNRDHREESRKSVG 54
Query: 342 -------TEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
E + W K VS +LAAAV+AFS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 55 CSAVAANAESRKWGKVVSATLAAAVIAFSS-DMSALADLNKFEAEMRGEFGIGS 107
>gb|AGV54388.1| thylakoid lumenal protein [Phaseolus vulgaris]
Length = 280
Score = 73.9 bits (180), Expect = 2e-11
Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 16/114 (14%)
Frame = +3
Query: 189 MAMTSISLLPLKS--INGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKHE------- 341
MA+ S+S L + S ++ S++ I D SKPF+V+CQL + E
Sbjct: 2 MALNSLSPLSVNSLLVSSSSASMISDSH-------SKPFAVSCQLNSNRDHREESRKSVG 54
Query: 342 -------TEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
E + W K VS +LAAAV+AFS+ ++SA+A+LNKFEAE RGEFGIGS
Sbjct: 55 CSAVAANAESRKWGKVVSATLAAAVIAFSS-DMSALADLNKFEAEMRGEFGIGS 107
>gb|EOY24426.1| Pentapeptide repeat-containing protein isoform 1 [Theobroma cacao]
Length = 287
Score = 73.6 bits (179), Expect = 3e-11
Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 20/118 (16%)
Frame = +3
Query: 189 MAMTSISLLPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETP-------------- 326
MA+ S+S L + S++ S + P L S K F V CQ+ P
Sbjct: 1 MALASVSSLSINSLSISSPSKAPCYHLQSFL---KRFGVFCQINNPEIKAQIREFSSEKE 57
Query: 327 ---NSKH---ETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
N+K+ + + K+W+ VST+LAAA+VAF + ++SA+AELNK+EAETRGEFGIGS
Sbjct: 58 DCSNNKYAVTDAKFKSWRALVSTALAAAMVAFGS-DMSALAELNKYEAETRGEFGIGS 114
>ref|XP_003611269.1| Thylakoid lumenal protein [Medicago truncatula]
gi|355512604|gb|AES94227.1| Thylakoid lumenal protein
[Medicago truncatula]
Length = 147
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +3
Query: 288 SKPFSVTCQLETPNSKHETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGE 467
SK V C++ N + KNW K VS +LAAAV+ FS+ ++SA+A+LNKFEAE RGE
Sbjct: 26 SKSSQVICKMSLNNDHPQESNKNWGKLVSATLAAAVIVFSS-DMSALADLNKFEAEVRGE 84
Query: 468 FGIGS 482
FGIGS
Sbjct: 85 FGIGS 89
>ref|XP_003611267.1| Thylakoid lumenal protein [Medicago truncatula]
gi|355512602|gb|AES94225.1| Thylakoid lumenal protein
[Medicago truncatula]
Length = 262
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = +3
Query: 288 SKPFSVTCQLETPNSKHETEPKNWKKFVSTSLAAAVVAFSTMNISAMAELNKFEAETRGE 467
SK V C++ N + KNW K VS +LAAAV+ FS+ ++SA+A+LNKFEAE RGE
Sbjct: 26 SKSSQVICKMSLNNDHPQESNKNWGKLVSATLAAAVIVFSS-DMSALADLNKFEAEVRGE 84
Query: 468 FGIGS 482
FGIGS
Sbjct: 85 FGIGS 89
>emb|CBI31882.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 69.3 bits (168), Expect = 5e-10
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Frame = +3
Query: 213 LPLKSINGISSTSIPDRTLNSLCIPSKPFSVTCQLETPNSKH-----ETEPKNWKKFVST 377
+ L S++ + + P+ L SL SKPF+V C++E + E K W++ VST
Sbjct: 1 MALSSVSPLYISKSPNH-LRSL---SKPFTVVCRIERQRENNWRGEANAESKKWQRLVST 56
Query: 378 SLAAAVVAFSTMNISAMAELNKFEAETRGEFGIGS 482
+LAAAVV S + + A+A+LNK+E ETRGEFGIGS
Sbjct: 57 ALAAAVVTLSPV-MPAVADLNKYEVETRGEFGIGS 90