BLASTX nr result
ID: Rehmannia23_contig00006836
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006836
(596 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote... 77 5e-12
sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote... 73 5e-11
ref|XP_002529988.1| conserved hypothetical protein [Ricinus comm... 72 1e-10
ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-li... 67 4e-09
emb|CBI20795.3| unnamed protein product [Vitis vinifera] 66 8e-09
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li... 66 8e-09
ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-... 65 1e-08
ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-... 65 1e-08
ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-... 65 1e-08
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-... 65 1e-08
sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protei... 65 2e-08
gb|AAF34803.1|AF230739_1 retinoblastoma-like protein [Euphorbia ... 64 2e-08
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote... 64 2e-08
gb|AFJ64573.1| retinoblastoma-related protein 1 [Brassica juncea] 64 3e-08
gb|AFJ64571.1| retinoblastoma-related protein 1 [Brassica nigra] 64 3e-08
ref|XP_003627961.1| Retinoblastoma-related protein [Medicago tru... 64 4e-08
sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related prote... 64 4e-08
gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus pe... 62 1e-07
gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa] 62 1e-07
gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea] 62 1e-07
>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
baicalensis]
Length = 1006
Score = 76.6 bits (187), Expect = 5e-12
Identities = 45/82 (54%), Positives = 53/82 (64%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
VM+GD+ + CNMY TSEDELRKTLEKANNLITDILKK+ LASE +L+ +
Sbjct: 245 VMRGDKADLVASL-CNMYGTSEDELRKTLEKANNLITDILKKKPCLASECKPANLENIV- 302
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
DGL+YFE LMD
Sbjct: 303 ----------TDGLVYFEGLMD 314
>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
gi|89111303|dbj|BAE80326.1| retinoblastoma related
protein [Camellia sinensis]
Length = 1025
Score = 73.2 bits (178), Expect = 5e-11
Identities = 45/82 (54%), Positives = 53/82 (64%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
VMKG + L CN+YETSEDELRKT+EKAN+LI DILKK ASE +L+ +IA
Sbjct: 256 VMKGSKGVDLLASLCNIYETSEDELRKTMEKANDLIEDILKKNRRSASECRSENLE-NIA 314
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
DGLIYFEDL+D
Sbjct: 315 ----------TDGLIYFEDLLD 326
>ref|XP_002529988.1| conserved hypothetical protein [Ricinus communis]
gi|254789790|sp|B9SVG9.1|RBR_RICCO RecName:
Full=Retinoblastoma-related protein
gi|223530511|gb|EEF32393.1| conserved hypothetical
protein [Ricinus communis]
Length = 1020
Score = 72.0 bits (175), Expect = 1e-10
Identities = 42/82 (51%), Positives = 51/82 (62%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
V KGD+ L CN Y+TSEDELRKT+EK NNLI DILKK+ +ASE + +
Sbjct: 250 VKKGDKGVDLLASLCNKYDTSEDELRKTMEKTNNLIADILKKKPHMASEYKNEN------ 303
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
L N DGLIY+EDLM+
Sbjct: 304 -----LDNINTDGLIYYEDLME 320
>ref|XP_004307078.1| PREDICTED: retinoblastoma-related protein-like [Fragaria vesca
subsp. vesca]
Length = 1026
Score = 67.0 bits (162), Expect = 4e-09
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
V KG++ L CN+Y+TSE+ELRKT+EKAN LI+D+LKK+ LASE + +LK
Sbjct: 260 VRKGNKGVDLLASLCNIYDTSEEELRKTMEKANTLISDLLKKKPCLASECKNENLK---- 315
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
+ DGL YFE L+D
Sbjct: 316 -------NIDTDGLTYFEGLLD 330
>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 65.9 bits (159), Expect = 8e-09
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
V KG++ L C++YETSEDE+RKT+E+ N +I DILKK+ LASE +
Sbjct: 245 VKKGNKGMDLLASLCDIYETSEDEVRKTMEQTNKVIVDILKKKPCLASECKSEN------ 298
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
L+ + DGL+YFEDLMD
Sbjct: 299 -----LASIDPDGLVYFEDLMD 315
>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
Full=Retinoblastoma-related protein
gi|359392418|gb|AEV45768.1| RBR protein [Vitis
pseudoreticulata]
Length = 1007
Score = 65.9 bits (159), Expect = 8e-09
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
V KG++ L C++YETSEDE+RKT+E+ N +I DILKK+ LASE +
Sbjct: 246 VKKGNKGMDLLASLCDIYETSEDEVRKTMEQTNKVIVDILKKKPCLASECKSEN------ 299
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
L+ + DGL+YFEDLMD
Sbjct: 300 -----LASIDPDGLVYFEDLMD 316
>ref|XP_006598087.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1005
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+EKANN+I DILKK+ LASE +L+ + DGL
Sbjct: 253 CNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETENLE-----------NIDKDGL 301
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 302 TYFKDLME 309
>ref|XP_006594366.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
Length = 1014
Score = 65.5 bits (158), Expect = 1e-08
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+EKANN+I DILKK+ LASE +L+ + DGL
Sbjct: 263 CNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETENLE-----------NIDKDGL 311
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 312 TYFKDLME 319
>ref|XP_004511054.1| PREDICTED: retinoblastoma-related protein 1-like [Cicer arietinum]
Length = 1028
Score = 65.5 bits (158), Expect = 1e-08
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN Y TSEDELRKT+EKANNLI DILKK+ LASE +L+ + DGL
Sbjct: 265 CNTYNTSEDELRKTMEKANNLIADILKKKPCLASECETENLENF-----------DKDGL 313
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 314 TYFKDLME 321
>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like isoform X1
[Glycine max]
Length = 1014
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+EKANN+I DILKK+ LASE +L+ + DGL
Sbjct: 263 CNIYNTSEDELRKTMEKANNVIADILKKQPCLASECETGNLE-----------NIDKDGL 311
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 312 TYFKDLME 319
>sp|Q9SLZ4.1|RBR1_PEA RecName: Full=Retinoblastoma-related protein 1; Short=PsRB1
gi|6681366|dbj|BAA88690.1| retinoblastoma-related
protein [Pisum sativum]
Length = 1026
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+E+ANNL+ DILKK+ LASE +L+ + DGL
Sbjct: 265 CNLYNTSEDELRKTIEQANNLVADILKKKPCLASECETENLENF-----------DRDGL 313
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 314 TYFKDLME 321
>gb|AAF34803.1|AF230739_1 retinoblastoma-like protein [Euphorbia esula]
Length = 801
Score = 64.3 bits (155), Expect = 2e-08
Identities = 38/82 (46%), Positives = 49/82 (59%)
Frame = +2
Query: 350 VMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIA 529
V KGD+ L CN Y+ SEDEL+K LEK NNLI DILKK ASE + +L+
Sbjct: 22 VKKGDKGVDLLASLCNQYDISEDELKKILEKTNNLIVDILKKTPRSASECKNENLE---- 77
Query: 530 LFLILLSCPNADGLIYFEDLMD 595
+ADGL+Y++DLM+
Sbjct: 78 -------NIDADGLVYYDDLME 92
>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
[Cocos nucifera]
Length = 1011
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
C+ Y TSEDELR+ +EKANNLI DILKK+ ASE + L+ N DGL
Sbjct: 265 CDKYHTSEDELRRVMEKANNLIVDILKKKPCAASECKREN-----------LAYINTDGL 313
Query: 572 IYFEDLMD 595
IYFEDL++
Sbjct: 314 IYFEDLLE 321
>gb|AFJ64573.1| retinoblastoma-related protein 1 [Brassica juncea]
Length = 1017
Score = 63.9 bits (154), Expect = 3e-08
Identities = 44/109 (40%), Positives = 57/109 (52%)
Frame = +2
Query: 269 ITFLAIDSLFDIICLFEGHSICSLFFTVMKGDRLTYLHPFNCNMYETSEDELRKTLEKAN 448
++ LAI + + C F +I V KGD+ L C +Y+ SEDELRKT++KAN
Sbjct: 220 VSILAI-LIIHVPCRFRNFNIQDSSRFVKKGDKDVDLIASLCKIYDASEDELRKTMDKAN 278
Query: 449 NLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGLIYFEDLMD 595
NLI ILKK+ AS + L N DGL YFEDL+D
Sbjct: 279 NLIETILKKKPSSASTCK-----------VDKLDNINPDGLTYFEDLLD 316
>gb|AFJ64571.1| retinoblastoma-related protein 1 [Brassica nigra]
Length = 1017
Score = 63.9 bits (154), Expect = 3e-08
Identities = 44/109 (40%), Positives = 57/109 (52%)
Frame = +2
Query: 269 ITFLAIDSLFDIICLFEGHSICSLFFTVMKGDRLTYLHPFNCNMYETSEDELRKTLEKAN 448
++ LAI + + C F +I V KGD+ L C +Y+ SEDELRKT++KAN
Sbjct: 220 VSILAI-LIIHVPCRFRNFNIQDSSRFVKKGDKDVDLIASLCKIYDASEDELRKTMDKAN 278
Query: 449 NLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGLIYFEDLMD 595
NLI ILKK+ AS + L N DGL YFEDL+D
Sbjct: 279 NLIETILKKKPSSASTCK-----------VDKLDNINPDGLTYFEDLLD 316
>ref|XP_003627961.1| Retinoblastoma-related protein [Medicago truncatula]
gi|355521983|gb|AET02437.1| Retinoblastoma-related
protein [Medicago truncatula]
Length = 1052
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+E+ANNL+ DILKK LASE +L+ + DGL
Sbjct: 290 CNIYNTSEDELRKTMEQANNLVADILKKTPCLASECETENLEDF-----------DKDGL 338
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 339 TYFKDLME 346
>sp|A9UL14.1|RBR_MEDSA RecName: Full=Retinoblastoma-related protein; Short=MsRBR
gi|62956049|gb|AAY23367.1| retinoblastoma-related
protein [Medicago sativa]
Length = 1025
Score = 63.5 bits (153), Expect = 4e-08
Identities = 35/68 (51%), Positives = 44/68 (64%)
Frame = +2
Query: 392 CNMYETSEDELRKTLEKANNLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGL 571
CN+Y TSEDELRKT+E+ANNL+ DILKK LASE +L+ + DGL
Sbjct: 263 CNIYNTSEDELRKTMEQANNLVADILKKTPCLASECETENLEDF-----------DKDGL 311
Query: 572 IYFEDLMD 595
YF+DLM+
Sbjct: 312 TYFKDLME 319
>gb|EMJ22108.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
Length = 1026
Score = 62.0 bits (149), Expect = 1e-07
Identities = 41/94 (43%), Positives = 50/94 (53%)
Frame = +2
Query: 314 FEGHSICSLFFTVMKGDRLTYLHPFNCNMYETSEDELRKTLEKANNLITDILKKEHLLAS 493
F SI V KG + L CN+Y+TSEDELR T+E AN LI DILKK+ AS
Sbjct: 249 FRKFSIHDSTHFVKKGGKGVDLLASLCNIYDTSEDELRNTMEMANALIADILKKKPCSAS 308
Query: 494 ESNHLHLK*SIALFLILLSCPNADGLIYFEDLMD 595
E H +L+ + DGL YFE LM+
Sbjct: 309 ECKHENLE-----------NMDPDGLTYFEGLME 331
>gb|AFJ64577.1| retinoblastoma-related protein 1a [Brassica rapa]
Length = 992
Score = 62.0 bits (149), Expect = 1e-07
Identities = 43/109 (39%), Positives = 56/109 (51%)
Frame = +2
Query: 269 ITFLAIDSLFDIICLFEGHSICSLFFTVMKGDRLTYLHPFNCNMYETSEDELRKTLEKAN 448
++ LAI + + C F SI V KGD+ L C +Y+ SEDELRK +++AN
Sbjct: 220 VSILAI-LIIHVPCRFRNFSIQDSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQAN 278
Query: 449 NLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGLIYFEDLMD 595
NLI ILKK+ AS + L N DGL YFEDL+D
Sbjct: 279 NLIETILKKKPSSASTCK-----------IDKLDNINPDGLTYFEDLLD 316
>gb|AFJ64574.1| retinoblastoma-related protein 2 [Brassica juncea]
Length = 1016
Score = 62.0 bits (149), Expect = 1e-07
Identities = 43/109 (39%), Positives = 56/109 (51%)
Frame = +2
Query: 269 ITFLAIDSLFDIICLFEGHSICSLFFTVMKGDRLTYLHPFNCNMYETSEDELRKTLEKAN 448
++ LAI + + C F SI V KGD+ L C +Y+ SEDELRK +++AN
Sbjct: 220 VSILAI-LIIHVPCRFRNFSIQDSSRFVKKGDKEVDLVASLCKIYDASEDELRKIMDQAN 278
Query: 449 NLITDILKKEHLLASESNHLHLK*SIALFLILLSCPNADGLIYFEDLMD 595
NLI ILKK+ AS + L N DGL YFEDL+D
Sbjct: 279 NLIETILKKKPSSASTCK-----------IDKLDNINPDGLTYFEDLLD 316