BLASTX nr result
ID: Rehmannia23_contig00006814
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00006814
(413 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlise... 156 3e-36
gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlise... 140 1e-31
ref|XP_006340741.1| PREDICTED: cold shock domain-containing prot... 105 5e-21
ref|XP_002533802.1| cellular nucleic acid binding protein, putat... 104 1e-20
ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [S... 103 2e-20
ref|XP_002327749.1| predicted protein [Populus trichocarpa] gi|5... 103 2e-20
ref|XP_006380594.1| cold-shock DNA-binding family protein [Popul... 101 9e-20
ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Caps... 101 9e-20
gb|EOX90843.1| Cold shock domain protein 1, putative [Theobroma ... 100 3e-19
gb|EXC35347.1| Glycine-rich protein 2 [Morus notabilis] 99 4e-19
sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|1... 99 6e-19
ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus... 99 6e-19
ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citr... 99 6e-19
ref|XP_004234533.1| PREDICTED: cold shock protein 1-like [Solanu... 99 6e-19
dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum] 98 1e-18
emb|CBI17369.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vit... 98 1e-18
ref|XP_002304323.1| predicted protein [Populus trichocarpa] 98 1e-18
ref|XP_006343364.1| PREDICTED: cold shock domain-containing prot... 97 2e-18
emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera] 97 2e-18
>gb|EPS59299.1| hypothetical protein M569_15509, partial [Genlisea aurea]
Length = 200
Score = 156 bits (394), Expect = 3e-36
Identities = 75/79 (94%), Positives = 78/79 (98%)
Frame = -2
Query: 352 EEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILD 173
EEKL+RSKGVVTKFNDQKGYGFIQPDEGG+DLFVHQTAIKSDGYRTLREGQ VEFTIILD
Sbjct: 1 EEKLTRSKGVVTKFNDQKGYGFIQPDEGGDDLFVHQTAIKSDGYRTLREGQEVEFTIILD 60
Query: 172 GDKTKATDVTAPGGGPVDL 116
GDKTKAT+VTAPGGGPVDL
Sbjct: 61 GDKTKATEVTAPGGGPVDL 79
>gb|EPS64559.1| hypothetical protein M569_10222, partial [Genlisea aurea]
Length = 184
Score = 140 bits (354), Expect = 1e-31
Identities = 65/78 (83%), Positives = 73/78 (93%)
Frame = -2
Query: 343 LSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDK 164
+SRSKGVVT+FNDQKGYGFIQPDEGG++LFVHQTAIKSDG+R LREGQ VEFT++LDG+K
Sbjct: 1 MSRSKGVVTRFNDQKGYGFIQPDEGGDELFVHQTAIKSDGFRKLREGQEVEFTVVLDGEK 60
Query: 163 TKATDVTAPGGGPVDLTP 110
TKATDVTAPGGG VD P
Sbjct: 61 TKATDVTAPGGGSVDTLP 78
>ref|XP_006340741.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
tuberosum]
Length = 261
Score = 105 bits (263), Expect = 5e-21
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = -2
Query: 340 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 161
SR G V+KFN+ KGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGTVSKFNNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 160 KATDVTAPGGGPVD 119
+A DVT P G P+D
Sbjct: 66 QAIDVTGPDGAPLD 79
>ref|XP_002533802.1| cellular nucleic acid binding protein, putative [Ricinus communis]
gi|223526275|gb|EEF28589.1| cellular nucleic acid
binding protein, putative [Ricinus communis]
Length = 266
Score = 104 bits (260), Expect = 1e-20
Identities = 54/83 (65%), Positives = 68/83 (81%), Gaps = 3/83 (3%)
Frame = -2
Query: 361 SMAEEKLS-RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDG-YRTLREGQVVEF 188
SMAEE+ RS+G V +F+D+KG+GFI+PD+GGEDLFVH +AIKSDG YR+L E VVEF
Sbjct: 4 SMAEEQTGVRSRGKVVRFSDRKGFGFIKPDDGGEDLFVHHSAIKSDGRYRSLAEDDVVEF 63
Query: 187 TIIL-DGDKTKATDVTAPGGGPV 122
T+ L D +K +A DVTAPGGGP+
Sbjct: 64 TVSLSDDNKYQAVDVTAPGGGPI 86
>ref|XP_004232496.1| PREDICTED: DNA-binding protein HEXBP-like [Solanum lycopersicum]
Length = 260
Score = 103 bits (258), Expect = 2e-20
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = -2
Query: 340 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 161
SR G V+KF++ KGYGFI+PD+G EDLFVHQ+ IKSDGYR+L EGQ VEFT+ + GDK
Sbjct: 6 SRMTGTVSKFSNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTVKGDKY 65
Query: 160 KATDVTAPGGGPVD 119
+A DVT P G P+D
Sbjct: 66 QAIDVTGPDGAPLD 79
>ref|XP_002327749.1| predicted protein [Populus trichocarpa]
gi|566170805|ref|XP_006383095.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
gi|550338672|gb|ERP60892.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
Length = 235
Score = 103 bits (257), Expect = 2e-20
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 6/85 (7%)
Frame = -2
Query: 358 MAEEKLS-----RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQV 197
MAEE+++ RS G V +F+D+KG+GFI+PD G +DLFVH +AIKSD GYRTL E V
Sbjct: 1 MAEEQVAATKEERSTGRVVRFSDKKGFGFIKPDAGDKDLFVHHSAIKSDGGYRTLYEDDV 60
Query: 196 VEFTIILDGDKTKATDVTAPGGGPV 122
VEFTI+L+ DK +A DVTAPGGGP+
Sbjct: 61 VEFTILLNDDKYQAVDVTAPGGGPI 85
>ref|XP_006380594.1| cold-shock DNA-binding family protein [Populus trichocarpa]
gi|550334484|gb|ERP58391.1| cold-shock DNA-binding
family protein [Populus trichocarpa]
Length = 243
Score = 101 bits (252), Expect = 9e-20
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = -2
Query: 373 DLLPSMAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQV 197
D+ +A K RS G V +F+D+KG+GFI+PD G +DLFVH +AIKSD GYRTL E V
Sbjct: 8 DVAADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYRTLYEDDV 67
Query: 196 VEFTIILDGDKTKATDVTAPGGGPV 122
VEFTI+L DK +A +VTAPGGGP+
Sbjct: 68 VEFTILLTEDKYQAIEVTAPGGGPI 92
>ref|XP_006284948.1| hypothetical protein CARUB_v10006250mg [Capsella rubella]
gi|482553653|gb|EOA17846.1| hypothetical protein
CARUB_v10006250mg [Capsella rubella]
Length = 262
Score = 101 bits (252), Expect = 9e-20
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 358 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 179
MA E +RS G V FND KGYGFI PDEGG++LFVHQ+AI S+GYR+L +VEF+I
Sbjct: 1 MASESAARSTGKVNWFNDTKGYGFIAPDEGGDELFVHQSAIVSEGYRSLAVDDLVEFSIT 60
Query: 178 LDGD-KTKATDVTAPGGGPV 122
D KTKA DVTAPGGGP+
Sbjct: 61 QGSDGKTKAVDVTAPGGGPL 80
>gb|EOX90843.1| Cold shock domain protein 1, putative [Theobroma cacao]
Length = 249
Score = 99.8 bits (247), Expect = 3e-19
Identities = 49/78 (62%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = -2
Query: 352 EEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIIL- 176
E++ SRS G V FNDQKG+GFI+PD+ EDLFVHQ++IKSDGYR+L EG+ VEFT+
Sbjct: 7 EQQQSRSAGKVLWFNDQKGFGFIRPDDESEDLFVHQSSIKSDGYRSLAEGESVEFTVSQG 66
Query: 175 DGDKTKATDVTAPGGGPV 122
+G KT+A DVTA GG P+
Sbjct: 67 NGGKTQAVDVTAIGGSPI 84
>gb|EXC35347.1| Glycine-rich protein 2 [Morus notabilis]
Length = 258
Score = 99.4 bits (246), Expect = 4e-19
Identities = 53/83 (63%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = -2
Query: 358 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTI- 182
MAEE RS G V FND KG+GFI PD+GGEDLFVHQ++IKSDG+R+L EG VEF I
Sbjct: 1 MAEE---RSTGKVRWFNDSKGFGFITPDDGGEDLFVHQSSIKSDGFRSLAEGDTVEFQIA 57
Query: 181 ILDGDKTKATDVTAPGGGPVDLT 113
I D KTKA DVT PGG + T
Sbjct: 58 IADDGKTKAVDVTGPGGSSLQGT 80
>sp|P27484.1|GRP2_NICSY RecName: Full=Glycine-rich protein 2 gi|19743|emb|CAA42622.1|
nsGRP-2 [Nicotiana sylvestris]
Length = 214
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/80 (60%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 358 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 179
MAEE R+KG V F+DQKG+GFI PD+GGEDLFVHQ+ I+S+G+R+L EG+ VEF +
Sbjct: 1 MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60
Query: 178 LDGD-KTKATDVTAPGGGPV 122
GD +TKA DVT P G V
Sbjct: 61 SGGDGRTKAVDVTGPDGAAV 80
>ref|XP_006466955.1| PREDICTED: cold shock protein 1-like [Citrus sinensis]
Length = 258
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -2
Query: 346 KLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGD 167
+L+RS G VT F+ KGYGFI+PD+GG DLFVHQ +IKSDGYRTL E Q VEF + L+ D
Sbjct: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEAD 62
Query: 166 -KTKATDVTAPGGGPV 122
K +A DVTAPGG PV
Sbjct: 63 GKYQALDVTAPGGAPV 78
>ref|XP_006425451.1| hypothetical protein CICLE_v10027474mg [Citrus clementina]
gi|557527441|gb|ESR38691.1| hypothetical protein
CICLE_v10027474mg [Citrus clementina]
Length = 264
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
Frame = -2
Query: 346 KLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGD 167
+L+RS G VT F+ KGYGFI+PD+GG DLFVHQ +IKSDGYRTL E Q VEF + L+ D
Sbjct: 3 QLTRSTGKVTWFDGAKGYGFIRPDDGGADLFVHQKSIKSDGYRTLYENQSVEFDVQLEAD 62
Query: 166 -KTKATDVTAPGGGPV 122
K +A DVTAPGG PV
Sbjct: 63 GKYQALDVTAPGGAPV 78
>ref|XP_004234533.1| PREDICTED: cold shock protein 1-like [Solanum lycopersicum]
Length = 288
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/74 (60%), Positives = 60/74 (81%)
Frame = -2
Query: 340 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 161
+R GVV++F++QKGYGFI+PD+G EDLFVHQ+ IKS+G+R+L EGQ VEF + +GDK
Sbjct: 6 TRLTGVVSRFSNQKGYGFIKPDDGTEDLFVHQSEIKSEGFRSLYEGQKVEFMVTGNGDKY 65
Query: 160 KATDVTAPGGGPVD 119
+A DVT P G P+D
Sbjct: 66 QAVDVTGPDGAPLD 79
>dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum]
Length = 231
Score = 98.2 bits (243), Expect = 1e-18
Identities = 49/71 (69%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Frame = -2
Query: 337 RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIIL-DGDKT 161
R KG V FN KG+GFI PD+GGEDLFVHQ+AIKSDGYR+L E VEF II D +T
Sbjct: 4 RVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDGYRSLNENDAVEFEIITGDDGRT 63
Query: 160 KATDVTAPGGG 128
KA+DVTAPGGG
Sbjct: 64 KASDVTAPGGG 74
>emb|CBI17369.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 358 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 179
MA+E RS GVV F+DQKG+GFI P+EGGEDLFVHQ++IKSDG+R+L EG+ VEF I+
Sbjct: 1 MAQE---RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIV 57
Query: 178 LDGD-KTKATDVTAPGGGPV 122
L D +TKA DVT P G V
Sbjct: 58 LGEDGRTKAVDVTGPDGSSV 77
>ref|XP_002266115.1| PREDICTED: glycine-rich protein 2b-like [Vitis vinifera]
Length = 241
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/80 (63%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Frame = -2
Query: 358 MAEEKLSRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTII 179
MA+E RS GVV F+DQKG+GFI P+EGGEDLFVHQ++IKSDG+R+L EG+ VEF I+
Sbjct: 1 MAQE---RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIV 57
Query: 178 LDGD-KTKATDVTAPGGGPV 122
L D +TKA DVT P G V
Sbjct: 58 LGEDGRTKAVDVTGPDGSSV 77
>ref|XP_002304323.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Frame = -2
Query: 337 RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSD-GYRTLREGQVVEFTIILDGDKT 161
RS G V +F+D+KG+GFI+PD G +DLFVH +AIKSD GYRTL E VVEFTI+L DK
Sbjct: 2 RSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYRTLYEDDVVEFTILLTEDKY 61
Query: 160 KATDVTAPGGGPV 122
+A +VTAPGGGP+
Sbjct: 62 QAIEVTAPGGGPI 74
>ref|XP_006343364.1| PREDICTED: cold shock domain-containing protein 3-like [Solanum
tuberosum]
Length = 300
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/74 (59%), Positives = 60/74 (81%)
Frame = -2
Query: 340 SRSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGDKT 161
+R GVV++F++QKGYGFI+PD+G EDLFVHQ+ IKS+G+R+L EGQ VEF + +GDK
Sbjct: 6 TRLTGVVSRFSNQKGYGFIKPDDGTEDLFVHQSEIKSEGFRSLYEGQKVEFMVTGNGDKY 65
Query: 160 KATDVTAPGGGPVD 119
+A +VT P G P+D
Sbjct: 66 QAVEVTGPDGAPLD 79
>emb|CAN59784.1| hypothetical protein VITISV_042163 [Vitis vinifera]
Length = 247
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/73 (65%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Frame = -2
Query: 337 RSKGVVTKFNDQKGYGFIQPDEGGEDLFVHQTAIKSDGYRTLREGQVVEFTIILDGD-KT 161
RS GVV F+DQKG+GFI P+EGGEDLFVHQ++IKSDG+R+L EG+ VEF I+L D +T
Sbjct: 5 RSTGVVRWFSDQKGFGFITPNEGGEDLFVHQSSIKSDGFRSLGEGETVEFQIVLGEDGRT 64
Query: 160 KATDVTAPGGGPV 122
KA DVT P G V
Sbjct: 65 KAVDVTGPDGSSV 77