BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00006645
         (1598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD92665.1| RNA polymerase II [Mimulus guttatus]                 1021   0.0  
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...  1021   0.0  
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...  1021   0.0  
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ...  1013   0.0  
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su...  1012   0.0  
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su...  1010   0.0  
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta...  1009   0.0  
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr...  1009   0.0  
gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotia...  1009   0.0  
gb|EOY28254.1| DNA-directed RNA polymerase family protein isofor...  1009   0.0  
gb|EOY28253.1| DNA-directed RNA polymerase family protein isofor...  1009   0.0  
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su...  1008   0.0  
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su...  1008   0.0  
ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago trunca...  1008   0.0  
gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus...  1007   0.0  
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su...  1006   0.0  
gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia...  1006   0.0  
gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus pe...  1004   0.0  
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...  1004   0.0  
gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth...  1004   0.0  

>emb|CAD92665.1| RNA polymerase II [Mimulus guttatus]
          Length = 629

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 505/533 (94%), Positives = 508/533 (95%), Gaps = 1/533 (0%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG 
Sbjct: 90   VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGF 149

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLVSARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 150  IEYIDTEEEETTMISMTINDLVSARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 209

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 210  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 269

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR E KKMGTLVKEDFGRPDRANT
Sbjct: 270  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEXKKMGTLVKEDFGRPDRANT 329

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRH 897
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRH
Sbjct: 330  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRH 389

Query: 898  SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1077
            SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL
Sbjct: 390  SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 449

Query: 1078 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1257
            EGI PDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 450  EGINPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 509

Query: 1258 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1437
            YQMRG+ETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 510  YQMRGYETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 569

Query: 1438 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 570  RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEKCGLIAIANLKK 622


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 1021 bits (2640), Expect = 0.0
 Identities = 499/532 (93%), Positives = 509/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRE+P+DGGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGF 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDV+IGKTTPIA DEAQG AARYT+RDHSTSLRHS
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHS 904

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTME 964

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+LTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1136


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score = 1021 bits (2639), Expect = 0.0
 Identities = 497/532 (93%), Positives = 511/532 (96%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKD+QALQQRESPDDGGWH+LVAKG 
Sbjct: 614  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGF 673

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDL+SA++NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 674  IEYIDTEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 733

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 734  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 793

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 794  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 853

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHS
Sbjct: 854  MGMRHGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHS 913

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 914  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 973

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 974  GISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1033

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L+SMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1034 QMRGFETMYNGHTGRRLSSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1093

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE+CGLIAIANLKK
Sbjct: 1094 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCEQCGLIAIANLKK 1145


>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
            gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
            Full=DNA-directed RNA polymerase II subunit RPB2;
            Short=RNA polymerase II subunit 2; Short=RNA polymerase
            II subunit B2; AltName: Full=DNA-directed RNA polymerase
            II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
            polymerase II subunit 2 [Solanum lycopersicum]
          Length = 1191

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 492/532 (92%), Positives = 508/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 785  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136


>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
            tuberosum]
          Length = 1191

 Score = 1012 bits (2617), Expect = 0.0
 Identities = 492/532 (92%), Positives = 507/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRL+IKKKDIQ LQQRESPD+GGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQTLQQRESPDEGGWHDLVAKGY 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVQARLNPGDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA T
Sbjct: 785  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATT 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 904

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 965  GISPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1024

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136


>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
            sinensis]
          Length = 1195

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 493/532 (92%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRESP+DGGWHDLVAKG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARL+P EAY+DTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 788  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ DEAQGQA+RYT+RDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKK 1139


>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
            gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
            II subunit, putative [Ricinus communis]
          Length = 1194

 Score = 1009 bits (2610), Expect = 0.0
 Identities = 493/532 (92%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRES ++GGWHDLVAKG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              +DLV AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 788  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA +EAQGQ+ARYT+RDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1139


>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
            gi|557525528|gb|ESR36834.1| hypothetical protein
            CICLE_v10027701mg [Citrus clementina]
          Length = 1195

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 492/532 (92%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DI ALQQRESP+DGGWHDLVAKG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARL+P EAY+DTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTINDLVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 788  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ DEAQGQA+RYT+RDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+LT+MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGA+HFLKERLFDQSDAYR+HVCE CGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGASHFLKERLFDQSDAYRVHVCEHCGLIAIANLKK 1139


>gb|AAY89346.1| RNA polymerase II second largest subunit [Nicotiana sylvestris]
          Length = 1087

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 491/532 (92%), Positives = 507/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRESP++GGWHDLVAKG 
Sbjct: 508  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGY 567

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDL  ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 568  IEYIDTEEEETTMISMTINDLXQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 627

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 628  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 687

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGY+QEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 688  AIVAISCYSGYSQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 747

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 748  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 807

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 808  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 867

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 868  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 927

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 928  QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 987

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 988  DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1039


>gb|EOY28254.1| DNA-directed RNA polymerase family protein isoform 2 [Theobroma
            cacao]
          Length = 809

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 491/532 (92%), Positives = 507/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG 
Sbjct: 255  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGF 314

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 315  IEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 374

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 375  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 434

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 435  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 494

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RY++RDHS SLRHS
Sbjct: 495  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHS 554

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 555  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 614

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGY
Sbjct: 615  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGY 674

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 675  QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 734

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 735  DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 786


>gb|EOY28253.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
            cacao]
          Length = 1189

 Score = 1009 bits (2608), Expect = 0.0
 Identities = 491/532 (92%), Positives = 507/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGF 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV AR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RY++RDHS SLRHS
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHS 904

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 905  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 964

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGY
Sbjct: 965  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGY 1024

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1025 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1084

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1136


>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
            vesca subsp. vesca]
          Length = 1191

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 492/533 (92%), Positives = 508/533 (95%), Gaps = 1/533 (0%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P+DGGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGF 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAA-RYTKRDHSTSLRH 897
            MGMRHGSYDKL+DDGLAPPGTRVSGEDVIIGKTTPIAP+EAQGQAA RY++RDHS SLRH
Sbjct: 845  MGMRHGSYDKLEDDGLAPPGTRVSGEDVIIGKTTPIAPEEAQGQAASRYSRRDHSISLRH 904

Query: 898  SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1077
            SETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+
Sbjct: 905  SETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 964

Query: 1078 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1257
            EG+ PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCG
Sbjct: 965  EGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1024

Query: 1258 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1437
            YQMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1025 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1084

Query: 1438 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1137


>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
            max]
          Length = 1192

 Score = 1008 bits (2606), Expect = 0.0
 Identities = 490/532 (92%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRESP+DGGWHDLV+KG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV AR+NP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTINDLVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIV+IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 788  AIVSIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RYT+RDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1139


>ref|XP_003589372.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355478420|gb|AES59623.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 1213

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 490/532 (92%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESP+DGGWHDLV+KG 
Sbjct: 627  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVSKGF 686

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 687  IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 746

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 747  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 806

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 807  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 866

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP++ +E QGQAARY+KRDHS SLRHS
Sbjct: 867  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEQQGQAARYSKRDHSISLRHS 926

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 927  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 986

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 987  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1046

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1047 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1106

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1107 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1158


>gb|ESW20162.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
          Length = 1194

 Score = 1007 bits (2604), Expect = 0.0
 Identities = 490/532 (92%), Positives = 505/532 (94%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKK+DI ALQQRESP++GGWHDLV+KG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTINDLVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NT
Sbjct: 788  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA RYT+RDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1139


>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cicer
            arietinum]
          Length = 1194

 Score = 1006 bits (2601), Expect = 0.0
 Identities = 489/532 (91%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI +LQQRESP++GGWHDLV+KG 
Sbjct: 608  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGF 667

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 668  IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 727

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 728  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 787

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 788  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 847

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP++ +EAQGQAARY+KRDHS SLRHS
Sbjct: 848  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSISLRHS 907

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 908  ETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 967

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 968  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1027

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1028 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1087

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCE CGLIAIANLKK
Sbjct: 1088 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEHCGLIAIANLKK 1139


>gb|AAY89347.1| RNA polymerase II second largest subunit [Petunia x hybrida]
          Length = 1195

 Score = 1006 bits (2600), Expect = 0.0
 Identities = 488/532 (91%), Positives = 506/532 (95%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQ+LLIKKKDIQ LQQRE+P++GGWHDLVAKG 
Sbjct: 609  VVRDIRLKELRIYTDYGRCSRPLFIVEKQKLLIKKKDIQQLQQRETPEEGGWHDLVAKGY 668

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV A +NP +AYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 669  IEYIDTEEEETTMISMTINDLVQASINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHN 728

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 729  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 788

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+T
Sbjct: 789  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRAST 848

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ D+AQGQA+RYT++DHSTSLRHS
Sbjct: 849  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHS 908

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 909  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIE 968

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 969  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1028

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1029 QMRGFETMYNGHTGRRLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1088

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1089 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1140


>gb|EMJ15758.1| hypothetical protein PRUPE_ppa000425mg [Prunus persica]
          Length = 1192

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 490/533 (91%), Positives = 506/533 (94%), Gaps = 1/533 (0%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRE+P+DGGWHDLVAKG 
Sbjct: 605  VVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRENPEDGGWHDLVAKGF 664

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLV ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 665  IEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 724

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 725  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 784

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAI+CYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANT
Sbjct: 785  AIVAISCYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANT 844

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAA-RYTKRDHSTSLRH 897
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTP+A DEAQGQAA RYT+RDHS SLRH
Sbjct: 845  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAQGQAASRYTRRDHSISLRH 904

Query: 898  SETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTL 1077
            SETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+
Sbjct: 905  SETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTV 964

Query: 1078 EGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCG 1257
            EG+ PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNIS+ALH CG
Sbjct: 965  EGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHSCG 1024

Query: 1258 YQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1437
            YQMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS
Sbjct: 1025 YQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRS 1084

Query: 1438 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKK
Sbjct: 1085 RDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKK 1137


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 490/532 (92%), Positives = 505/532 (94%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDI ALQQRESP+DGGWHDLVAKG 
Sbjct: 613  VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGF 672

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              +DL+ AR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 673  IEYIDTEEEETTMISMTISDLIQARINPVEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 732

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN
Sbjct: 733  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 792

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 793  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 852

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHS 900
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQAARY++RDHS SLRHS
Sbjct: 853  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYSRRDHSISLRHS 912

Query: 901  ETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLE 1080
            E G+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+E
Sbjct: 913  ENGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVE 972

Query: 1081 GICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1260
            GI PDIIVNPHAIPSRMTIGQLIEC+MGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY
Sbjct: 973  GITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGY 1032

Query: 1261 QMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1440
            QMRGFETMYNGHTGR+L++MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR
Sbjct: 1033 QMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSR 1092

Query: 1441 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCE CGLIAIANLKK
Sbjct: 1093 DGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCECCGLIAIANLKK 1144


>gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus]
          Length = 733

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 492/534 (92%), Positives = 504/534 (94%), Gaps = 2/534 (0%)
 Frame = +1

Query: 1    VVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGX 180
            VVRDIRLKELRIYTDYGRCSRPLFIVE QRLLIKK+DIQALQQRESP+DGGWHDLV+KG 
Sbjct: 147  VVRDIRLKELRIYTDYGRCSRPLFIVENQRLLIKKRDIQALQQRESPEDGGWHDLVSKGY 206

Query: 181  XXXXXXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 360
                              NDLVSAR N  EAYSDTYTHCEIHPSLILGVCASIIPFPDHN
Sbjct: 207  IEYIDTEEEETTMISMTINDLVSARANKKEAYSDTYTHCEIHPSLILGVCASIIPFPDHN 266

Query: 361  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGIN 540
            QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR+LPAGIN
Sbjct: 267  QSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRELPAGIN 326

Query: 541  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANT 720
            AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NT
Sbjct: 327  AIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNT 386

Query: 721  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQ--GQAARYTKRDHSTSLR 894
            MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEA   G AARYTKRDHSTSLR
Sbjct: 387  MGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEATQGGPAARYTKRDHSTSLR 446

Query: 895  HSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 1074
            HSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT
Sbjct: 447  HSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT 506

Query: 1075 LEGICPDIIVNPHAIPSRMTIGQLIECVMGKVAAHMGKEGDATPFTDVTVDNISKALHKC 1254
            +EGICPDIIVNPHAIPSRMTIGQLIEC+MGKVAA MGKEGDATPFTDVTVDNISKALHKC
Sbjct: 507  IEGICPDIIVNPHAIPSRMTIGQLIECIMGKVAAXMGKEGDATPFTDVTVDNISKALHKC 566

Query: 1255 GYQMRGFETMYNGHTGRKLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 1434
            GYQMRGFETMYNGHTGR+L + IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR
Sbjct: 567  GYQMRGFETMYNGHTGRRLPAXIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGR 626

Query: 1435 SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKK 1596
            SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYR+HVCERCGL+AIANLKK
Sbjct: 627  SRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLVAIANLKK 680