BLASTX nr result
ID: Rehmannia23_contig00005656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00005656
(504 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006413743.1| hypothetical protein EUTSA_v10024251mg [Eutr... 86 4e-15
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 86 4e-15
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 86 4e-15
gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanth... 86 7e-15
gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus not... 85 9e-15
ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 85 9e-15
ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Popu... 85 9e-15
ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Trit... 85 9e-15
ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 85 9e-15
tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II sub... 85 9e-15
ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II su... 85 9e-15
dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare] 85 9e-15
ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [S... 85 9e-15
gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| pu... 85 9e-15
>ref|XP_006413743.1| hypothetical protein EUTSA_v10024251mg [Eutrema salsugineum]
gi|557114913|gb|ESQ55196.1| hypothetical protein
EUTSA_v10024251mg [Eutrema salsugineum]
Length = 1188
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1139 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1178
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1138 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1177
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 86.3 bits (212), Expect = 4e-15
Identities = 40/40 (100%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT
Sbjct: 1147 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 1186
>gb|AAZ08467.1| RNA polymerase II second largest subunit [Linanthus californicus]
Length = 733
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRM+T
Sbjct: 682 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMMT 721
>gb|EXC18122.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
Length = 1193
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1140 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1179
>ref|XP_006650345.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Oryza
brachyantha]
Length = 1184
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1133 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1172
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_006347043.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Solanum
tuberosum]
Length = 1191
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1138 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
Length = 1195
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1141 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1180
>ref|XP_002305136.2| hypothetical protein POPTR_0004s04320g [Populus trichocarpa]
gi|550340301|gb|EEE85647.2| hypothetical protein
POPTR_0004s04320g [Populus trichocarpa]
Length = 1215
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1162 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1201
>ref|XP_004982317.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X2 [Setaria italica]
Length = 1190
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>ref|XP_004982316.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like isoform
X1 [Setaria italica]
Length = 1226
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1175 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1214
>gb|EMS54198.1| DNA-directed RNA polymerase II subunit RPB2 [Triticum urartu]
Length = 1204
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1128 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1167
>ref|XP_004294022.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Fragaria
vesca subsp. vesca]
Length = 1191
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1139 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1178
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1138 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1177
>tpg|DAA50300.1| TPA: putative DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 311 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 350
>ref|XP_003561873.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like
[Brachypodium distachyon]
Length = 1228
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1177 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1216
>dbj|BAJ88548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 213 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 252
>ref|XP_002466750.1| hypothetical protein SORBIDRAFT_01g013470 [Sorghum bicolor]
gi|241920604|gb|EER93748.1| hypothetical protein
SORBIDRAFT_01g013470 [Sorghum bicolor]
Length = 1218
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 1167 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 1206
>gb|ACN34912.1| unknown [Zea mays] gi|413933608|gb|AFW68159.1| putative
DNA-directed RNA polymerase II subunit family protein
[Zea mays]
Length = 362
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1
Query: 1 SFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRMLT 120
SFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRMLT
Sbjct: 311 SFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRMLT 350