BLASTX nr result

ID: Rehmannia23_contig00005505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00005505
         (1226 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311988.1| KOW domain-containing transcription factor f...    70   2e-09
ref|XP_002315331.1| predicted protein [Populus trichocarpa]            64   1e-07
ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis...    62   6e-07

>ref|XP_002311988.1| KOW domain-containing transcription factor family protein [Populus
            trichocarpa] gi|222851808|gb|EEE89355.1| KOW
            domain-containing transcription factor family protein
            [Populus trichocarpa]
          Length = 1853

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 2/183 (1%)
 Frame = -1

Query: 959  DKSYSWGNSSNNDVGGWKSSTGNGGSWNQRDGDK-NPSESWSQPKGDASQXXXXXXXXXX 783
            DK++ W N +NN  GGWK++ G G SWN+  GD+ +   SW+   G  S           
Sbjct: 1507 DKTFDWKNGANNSSGGWKNN-GGGSSWNRGGGDRGHQQNSWNSGSGGTSNEGGGWSSQGS 1565

Query: 782  XWNQAKANDSNKDAGQSDTGASGWESSSVHVKVVSTGSEKTTGNKETGWG-ASGQATSVV 606
             WNQ++   + KD+G SD  A GW             ++ T  N +  WG  +   +S  
Sbjct: 1566 GWNQSR---TAKDSGGSDL-AGGW-------------NKGTCANSDVAWGQGNSWKSSNP 1608

Query: 605  TEMGQSNESREVEGPADTXXXXXXXXXXXXXXGDGNSSGSWKKTEANDGGQAGGSTKDDG 426
            +  G S  S+E++G  D                      SWK +  +  G +  S +  G
Sbjct: 1609 SGEGWSKSSKEIKGSEDQGGGWNKGPSGANSDAAWGQGNSWKSSNPSGEGWSQSSKEIKG 1668

Query: 425  PSD 417
              D
Sbjct: 1669 SED 1671


>ref|XP_002315331.1| predicted protein [Populus trichocarpa]
          Length = 1697

 Score = 64.3 bits (155), Expect = 1e-07
 Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 14/186 (7%)
 Frame = -1

Query: 959  DKSYSWGNSSNNDVGGWKSSTGNGGSWNQRDGDKNPSESWSQPKGDASQXXXXXXXXXXX 780
            D ++ W N +NN  GGWK++ G G +WNQ   DK    SW+   G  S            
Sbjct: 1410 DSTFGWKNGANNSSGGWKNN-GGGSNWNQGGDDKGQHNSWNSGGGGTSNRAGGWSSQDSD 1468

Query: 779  WNQAKANDSNKDAGQSDTGASGWESSSVHVKVVSTGSEKTTGNKETGWGASGQATSVVTE 600
            WNQ++     KD+  +D  A GW             ++ T  N +  WG      S  + 
Sbjct: 1469 WNQSR---MAKDSCSNDL-AGGW-------------NKGTGANSDAAWGQGNSWKSSNSS 1511

Query: 599  MGQSNESREVEGPADTXXXXXXXXXXXXXXGDGNSSGS--------------WKKTEAND 462
             G  N ++E++G  D                   + G+              W ++ A+ 
Sbjct: 1512 GGDWNSNKEIKGSDDQGSGWNKGSGSCVPGDGWGNKGAGSGDAGTTGGDAKPWNQSSASG 1571

Query: 461  GGQAGG 444
            GGQ+ G
Sbjct: 1572 GGQSSG 1577


>ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis]
            gi|223525980|gb|EEF28368.1| suppressor of ty, putative
            [Ricinus communis]
          Length = 1547

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 48/194 (24%), Positives = 71/194 (36%), Gaps = 18/194 (9%)
 Frame = -1

Query: 959  DKSYSWGNSSNNDVGGWKSSTGNGGSWNQRDGDKNPSESWSQPKGDASQXXXXXXXXXXX 780
            DK++ W N +NN  GGWK+S   GGSW Q   DK   ESW+   G               
Sbjct: 1336 DKAFDWKNGANNS-GGWKTS--GGGSWKQGGDDKGQFESWNSGSGATGNQPGGWSSLGSG 1392

Query: 779  WNQAKANDSNKDAGQSDTGASGWESSSVHVKVVSTGSEKTTGNKETGWGASGQATSVVTE 600
            WNQ+     ++  G +  G S  E++       +  S+ + G + T W  S Q   V  +
Sbjct: 1393 WNQSAKTGGSEAGGWNKGGDSNSEAAGKAGN--NWNSDSSGGGRRTSWNQSSQEGRVSND 1450

Query: 599  MGQSNESRE-----------------VEGPADTXXXXXXXXXXXXXXGDGNSSGSWKKT- 474
            +G   +  +                  +G                    G  S  W ++ 
Sbjct: 1451 VGDGWKKEQDSNAQGQGGGWGSQGGWSKGAGSGNTDTSGDQVKIWNSSSGGQSSGWSQSK 1510

Query: 473  EANDGGQAGGSTKD 432
            EA +G  AGG   D
Sbjct: 1511 EAKEGTNAGGEPTD 1524


Top