BLASTX nr result
ID: Rehmannia23_contig00005441
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00005441
(872 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX97829.1| Ribosome-binding factor A family protein isoform ... 194 5e-47
ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor ... 191 3e-46
gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus pe... 190 5e-46
ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor ... 189 1e-45
gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis] 184 5e-44
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ... 183 8e-44
ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ... 183 8e-44
ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Popu... 181 4e-43
ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor ... 181 4e-43
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus... 181 4e-43
ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor ... 179 9e-43
gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus... 179 1e-42
ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago ... 179 2e-42
ref|XP_004500760.1| PREDICTED: probable ribosome-binding factor ... 176 8e-42
ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor ... 176 1e-41
ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutr... 176 1e-41
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ... 176 1e-41
ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citr... 175 2e-41
ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Caps... 174 4e-41
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thalian... 173 6e-41
>gb|EOX97829.1| Ribosome-binding factor A family protein isoform 1 [Theobroma
cacao] gi|508705934|gb|EOX97830.1| Ribosome-binding
factor A family protein isoform 1 [Theobroma cacao]
Length = 212
Score = 194 bits (492), Expect = 5e-47
Identities = 121/204 (59%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Frame = -2
Query: 835 MPHLLIHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVI---TTTTCGGSINGVNRAI 665
MPH+L+H LP T H L P P I T T G +I
Sbjct: 1 MPHVLLHHH---LPITTVH-------LKPCSFPTPKPTAHIHLRTNPTTGATIK------ 44
Query: 664 ICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----AD 500
CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA S D
Sbjct: 45 -CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISDVEVSTD 103
Query: 499 LQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSR 320
LQVVKVYVSVFGDERGKE+ALAGLKSK+KYVR ELGKRMKLRLTPE+RF+EDESLERGSR
Sbjct: 104 LQVVKVYVSVFGDERGKEIALAGLKSKSKYVRSELGKRMKLRLTPEIRFIEDESLERGSR 163
Query: 319 VIAILDKIKDENKKKVTNDESGEF 248
VIAILDKIK E KK T+++ EF
Sbjct: 164 VIAILDKIKAE-KKLATDEDEEEF 186
>ref|XP_006359612.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum tuberosum]
Length = 225
Score = 191 bits (485), Expect = 3e-46
Identities = 109/155 (70%), Positives = 117/155 (75%), Gaps = 6/155 (3%)
Frame = -2
Query: 679 VNRAII-CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS- 506
VNR I CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA S
Sbjct: 51 VNRRFIRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISD 110
Query: 505 ----ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDES 338
DLQVVKVYVSVFGDERGKEVAL GLKSKAKYVR ELG+RMKLRLTPE+RF+EDES
Sbjct: 111 VEVSTDLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDES 170
Query: 337 LERGSRVIAILDKIKDENKKKVTNDESGEFADGSN 233
LERGSRV+AILD+IKDEN+ K + SG DGS+
Sbjct: 171 LERGSRVLAILDRIKDENENK--DSPSGSANDGSS 203
>gb|EMJ02497.1| hypothetical protein PRUPE_ppa011113mg [Prunus persica]
Length = 223
Score = 190 bits (483), Expect = 5e-46
Identities = 119/197 (60%), Positives = 126/197 (63%), Gaps = 5/197 (2%)
Frame = -2
Query: 835 MPHLLIHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNRAIICM 656
+ HL ST + P T ST + + GL R P TTT I CM
Sbjct: 15 LSHLPSSSSTSSFPIRTQKSTAWIPQRNHAGLLRWHP-----TTT-----------IRCM 58
Query: 655 ANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----ADLQV 491
ANPRRV MVAKQIRRELSDMLLTD VLQYA S DLQV
Sbjct: 59 ANPRRVAMVAKQIRRELSDMLLTDNVLQYAILPEVALGADRYLSSLTTISDVEVSTDLQV 118
Query: 490 VKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRVIA 311
VKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPE+RF+EDESLERGSRVIA
Sbjct: 119 VKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEIRFIEDESLERGSRVIA 178
Query: 310 ILDKIKDENKKKVTNDE 260
ILDKIK+E K DE
Sbjct: 179 ILDKIKNEKKDPDIQDE 195
>ref|XP_004230968.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Solanum lycopersicum]
Length = 221
Score = 189 bits (480), Expect = 1e-45
Identities = 108/150 (72%), Positives = 115/150 (76%), Gaps = 7/150 (4%)
Frame = -2
Query: 679 VNRAII-CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS- 506
VNR I CMANPRRVKMVAKQIRRELSDMLLTDKVLQYA S
Sbjct: 51 VNRRFIRCMANPRRVKMVAKQIRRELSDMLLTDKVLQYAVLPEAALGADRYLSSLTTISD 110
Query: 505 ----ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDES 338
DLQVVKVYVSVFGDERGKEVAL GLKSKAKYVR ELG+RMKLRLTPE+RF+EDES
Sbjct: 111 VEVSTDLQVVKVYVSVFGDERGKEVALTGLKSKAKYVRSELGRRMKLRLTPEIRFIEDES 170
Query: 337 LERGSRVIAILDKIKDENKKKVT-NDESGE 251
LERGSRV+AILD+IKDEN+ K + ND S E
Sbjct: 171 LERGSRVLAILDRIKDENENKDSPNDGSSE 200
>gb|EXB61806.1| putative ribosome-binding factor A [Morus notabilis]
Length = 225
Score = 184 bits (466), Expect = 5e-44
Identities = 112/198 (56%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Frame = -2
Query: 835 MPHLLIHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNRAII-C 659
MP+L++HR ++ P L+ S SV +R T + + A+I C
Sbjct: 1 MPNLVLHRPPLS-PSLSHRHAPSSTSSSSVSSTSSLSFRFRTLRSTARIHPASHGAVIRC 59
Query: 658 MANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----ADLQ 494
MA PRRV MVAKQIRRELSDMLLTD LQYA S +DLQ
Sbjct: 60 MAKPRRVAMVAKQIRRELSDMLLTDTTLQYAILPEAALGADRYLSSLTTISDVEVSSDLQ 119
Query: 493 VVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRVI 314
VVKVYVSVFGDER KEVALAGLKSKAKYVR ELG+RMKLRLTPE+RF+EDESLERGSRVI
Sbjct: 120 VVKVYVSVFGDERRKEVALAGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESLERGSRVI 179
Query: 313 AILDKIKDENKKKVTNDE 260
AILDKIK+E K V D+
Sbjct: 180 AILDKIKNEKKTAVIEDD 197
>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 2 [Vitis vinifera]
Length = 215
Score = 183 bits (464), Expect = 8e-44
Identities = 110/205 (53%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Frame = -2
Query: 835 MPHLLIHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNR--AII 662
M HL ++ LP H + + + + P +R +T + G ++ +
Sbjct: 1 MLHLPLYHRHAPLP----HHHRRSSSITTSTTKSCPLFRRTLSTAVEVHVAGPHQIATVR 56
Query: 661 CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----ADL 497
CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A S ADL
Sbjct: 57 CMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADL 116
Query: 496 QVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRV 317
QVVKVYVSVFGDE+GKEVA+AGLKSKAKYVR ELG+RMKLRLTPE+RF+EDESLERGSRV
Sbjct: 117 QVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRV 176
Query: 316 IAILDKIKDENKKKVTNDESGEFAD 242
IAILD+IK+E K + D+ E +D
Sbjct: 177 IAILDRIKNEKKMAGSQDQPSESSD 201
>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
isoform 1 [Vitis vinifera]
Length = 223
Score = 183 bits (464), Expect = 8e-44
Identities = 110/205 (53%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Frame = -2
Query: 835 MPHLLIHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNR--AII 662
M HL ++ LP H + + + + P +R +T + G ++ +
Sbjct: 1 MLHLPLYHRHAPLP----HHHRRSSSITTSTTKSCPLFRRTLSTAVEVHVAGPHQIATVR 56
Query: 661 CMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----ADL 497
CMAN RRVKMVAKQIRRELSDMLLTDKVLQ+A S ADL
Sbjct: 57 CMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEVSADL 116
Query: 496 QVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRV 317
QVVKVYVSVFGDE+GKEVA+AGLKSKAKYVR ELG+RMKLRLTPE+RF+EDESLERGSRV
Sbjct: 117 QVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLERGSRV 176
Query: 316 IAILDKIKDENKKKVTNDESGEFAD 242
IAILD+IK+E K + D+ E +D
Sbjct: 177 IAILDRIKNEKKMAGSQDQPSESSD 201
>ref|XP_002306146.2| hypothetical protein POPTR_0004s17120g [Populus trichocarpa]
gi|550341216|gb|EEE86657.2| hypothetical protein
POPTR_0004s17120g [Populus trichocarpa]
Length = 224
Score = 181 bits (458), Expect = 4e-43
Identities = 115/214 (53%), Positives = 131/214 (61%), Gaps = 7/214 (3%)
Frame = -2
Query: 853 HR*YFLMPHLLIHRSTITLPCLTAHSTQSFCRL--DSVGLRRPPPYRVITTTTCGGSING 680
HR P L+ + LP T +ST R +V + P+ TT
Sbjct: 5 HRHLLHQPQPLLTYQSNFLPITTLYSTSFPIRSPKSTVPIHLQKPFMYGTT--------- 55
Query: 679 VNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-- 506
I CMANPRRVKMVAKQI+RELSDMLLTDKVLQYA S
Sbjct: 56 ----IKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAVLPEAALGADKYLSSLTTISDV 111
Query: 505 ---ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESL 335
ADLQVVKVYVSVFGD+RGKEVA+AGLKSKAKYVR +LG+RMKLRLTPE+RF+EDE L
Sbjct: 112 EVSADLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDEGL 171
Query: 334 ERGSRVIAILDKIKDENKKKVTNDESGEFADGSN 233
ERGSRVIAILD+IK E K + E +D SN
Sbjct: 172 ERGSRVIAILDRIKAE--KDNAESQVDELSDSSN 203
>ref|XP_004290346.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 215
Score = 181 bits (458), Expect = 4e-43
Identities = 101/143 (70%), Positives = 108/143 (75%), Gaps = 5/143 (3%)
Frame = -2
Query: 673 RAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS---- 506
R I CMA PRRV MVAKQI+RELSDMLLTDKVLQYA S
Sbjct: 45 RGIRCMAKPRRVAMVAKQIQRELSDMLLTDKVLQYAILPEVSLGADRYLSSLTTISDVEV 104
Query: 505 -ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLER 329
DLQVVKV+VSVFGDERGKEVALAGLKSKAKYVRGELG+RMKLRLTPE+RF+EDESLER
Sbjct: 105 STDLQVVKVFVSVFGDERGKEVALAGLKSKAKYVRGELGRRMKLRLTPEIRFIEDESLER 164
Query: 328 GSRVIAILDKIKDENKKKVTNDE 260
GSRVIAILD+IK+E K DE
Sbjct: 165 GSRVIAILDRIKNEKKIGEIQDE 187
>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
putative [Ricinus communis]
Length = 221
Score = 181 bits (458), Expect = 4e-43
Identities = 99/147 (67%), Positives = 110/147 (74%), Gaps = 5/147 (3%)
Frame = -2
Query: 667 IICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS-----A 503
I CMANPRRVKMVAKQI+RELSDMLLTDKVLQYA S
Sbjct: 54 IKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLSSLTTISDVEVST 113
Query: 502 DLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGS 323
DLQVVKVYVSVFGD+RGKEVA+AGLK+KAKYVR ELG+RMKLRLTPE+RF+EDES ERGS
Sbjct: 114 DLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEIRFIEDESFERGS 173
Query: 322 RVIAILDKIKDENKKKVTNDESGEFAD 242
RV+AILDKIK E + + DE E +D
Sbjct: 174 RVLAILDKIKAEKENTGSEDELSESSD 200
>ref|XP_003527611.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Glycine max]
Length = 255
Score = 179 bits (455), Expect = 9e-43
Identities = 105/154 (68%), Positives = 116/154 (75%), Gaps = 7/154 (4%)
Frame = -2
Query: 697 GGSINGV-NRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXX 521
G ++ GV +R I CMANPRRV+MVAKQIRRELS MLLTDKVLQYA
Sbjct: 80 GKAVVGVGSRMIRCMANPRRVQMVAKQIRRELSHMLLTDKVLQYAVLPEASLGADRYLSS 139
Query: 520 XXXX-----SADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVR 356
SADLQVVKVYVSVFGDERGKEVA+AGLKSKAKYVR ELGKR+KLRLTPE+R
Sbjct: 140 LTTITDVQVSADLQVVKVYVSVFGDERGKEVAIAGLKSKAKYVRSELGKRIKLRLTPEIR 199
Query: 355 FLEDESLERGSRVIAILDKIK-DENKKKVTNDES 257
FLED+S ERGSRVIAILDKIK D+++ K D S
Sbjct: 200 FLEDDSFERGSRVIAILDKIKNDKSQYKAELDSS 233
>gb|ESW07903.1| hypothetical protein PHAVU_009G002100g [Phaseolus vulgaris]
Length = 214
Score = 179 bits (454), Expect = 1e-42
Identities = 107/194 (55%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Frame = -2
Query: 823 LIHRSTI-TLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNRAIICMANP 647
++H + + + PCL + + R P R++ GS I CMANP
Sbjct: 1 MLHPALVASCPCLNPYPWRHHFPGAGTVTVRMTPMRIVREKAVVGS------RIRCMANP 54
Query: 646 RRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXX-----SADLQVVKV 482
RRV+MVAKQIRRELSDMLLTDKVLQYA S DLQVVKV
Sbjct: 55 RRVQMVAKQIRRELSDMLLTDKVLQYAILPETSLGADRYLSSLTTITDVQVSGDLQVVKV 114
Query: 481 YVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRVIAILD 302
+VSVFGDERG+EVA+AGLKSKAKYVR ELGKRMKLRLTPE+RFLED+S E+GSRVIAILD
Sbjct: 115 FVSVFGDERGREVAIAGLKSKAKYVRSELGKRMKLRLTPEIRFLEDDSFEKGSRVIAILD 174
Query: 301 KIKDENKKKVTNDE 260
KIK+E N E
Sbjct: 175 KIKNEKSSGSQNKE 188
>ref|XP_003604015.1| hypothetical protein MTR_3g117600 [Medicago truncatula]
gi|355493063|gb|AES74266.1| hypothetical protein
MTR_3g117600 [Medicago truncatula]
Length = 229
Score = 179 bits (453), Expect = 2e-42
Identities = 99/147 (67%), Positives = 108/147 (73%), Gaps = 5/147 (3%)
Frame = -2
Query: 685 NGVNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS 506
N I CMANPRRVKMVAKQIRRELSDML+TD VLQ+A +
Sbjct: 45 NASRITIKCMANPRRVKMVAKQIRRELSDMLITDNVLQFAVLPEASLGADLYLSSVTTIT 104
Query: 505 -----ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDE 341
ADLQV +VYVSVFGDERGKEVA+AGLKSKAKYVRGELG+RMKLRLTPE+RFLEDE
Sbjct: 105 DVEITADLQVARVYVSVFGDERGKEVAMAGLKSKAKYVRGELGRRMKLRLTPEIRFLEDE 164
Query: 340 SLERGSRVIAILDKIKDENKKKVTNDE 260
S ERGSRVIAILDKIK+E + N E
Sbjct: 165 SFERGSRVIAILDKIKNEKSETSKNME 191
>ref|XP_004500760.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Cicer arietinum]
Length = 233
Score = 176 bits (447), Expect = 8e-42
Identities = 101/163 (61%), Positives = 113/163 (69%), Gaps = 5/163 (3%)
Frame = -2
Query: 709 TTTCGGSINGVNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXX 530
T T + N +R I CMANPRRVKMVAKQIRRELSDML+TD VLQ+A
Sbjct: 41 TITGNANTNKCSRMIRCMANPRRVKMVAKQIRRELSDMLITDNVLQFAILPEASLGADSY 100
Query: 529 XXXXXXXS-----ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTP 365
+ DLQVV+VYVSVFGD RGKEVA+AGLKSKAKYVR ELG+RMKLRLTP
Sbjct: 101 LSSVTTITDVQITTDLQVVRVYVSVFGDARGKEVAMAGLKSKAKYVRSELGRRMKLRLTP 160
Query: 364 EVRFLEDESLERGSRVIAILDKIKDENKKKVTNDESGEFADGS 236
E+RF+EDES ERGSRVI ILDKIK+E K +S E D S
Sbjct: 161 EIRFIEDESFERGSRVIEILDKIKNE---KSGTSQSTELLDSS 200
>ref|XP_006487286.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
isoform X1 [Citrus sinensis]
gi|568867951|ref|XP_006487287.1| PREDICTED: probable
ribosome-binding factor A, chloroplastic-like isoform X2
[Citrus sinensis]
Length = 229
Score = 176 bits (446), Expect = 1e-41
Identities = 99/150 (66%), Positives = 111/150 (74%), Gaps = 6/150 (4%)
Frame = -2
Query: 673 RAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXS---- 506
+ + CMANPRRVKMVAKQI+RELSDMLLTDKVLQ+A S
Sbjct: 59 KTVKCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEV 118
Query: 505 -ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLER 329
ADLQVVKVYVSVFGD+RGKEVA+AGLKSKAKYVR +LG+RMKLRLTPE+RF+EDES ER
Sbjct: 119 SADLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFIEDESFER 178
Query: 328 GSRVIAILDKIKDENK-KKVTNDESGEFAD 242
GSRVIAILD+IK E + K N E E D
Sbjct: 179 GSRVIAILDRIKAEKEAAKSKNKEQFESPD 208
>ref|XP_006412190.1| hypothetical protein EUTSA_v10026220mg [Eutrema salsugineum]
gi|557113360|gb|ESQ53643.1| hypothetical protein
EUTSA_v10026220mg [Eutrema salsugineum]
Length = 214
Score = 176 bits (446), Expect = 1e-41
Identities = 113/207 (54%), Positives = 126/207 (60%), Gaps = 6/207 (2%)
Frame = -2
Query: 835 MPHLL-IHRSTITLPCLTAHSTQSFCRLDSVGLRRPPPYRVITTTTCGGSINGVNRAIIC 659
MP +L H ST P H S R + + P P T V R++ C
Sbjct: 1 MPGVLHTHHSTFFFPL---HPPISTVRSKTQSFQFPQPLAPANIRTN----LSVRRSVKC 53
Query: 658 MANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXSA-----DLQ 494
MANPRRVKMVAKQI RELSDMLLTD VLQ+A S DLQ
Sbjct: 54 MANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSNDLQ 113
Query: 493 VVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGSRVI 314
VVKVYVSVFGD+RGK+VA+AGLKSKAKYVR ELGKRMKLRLTPEVRF+EDES+ERGSRVI
Sbjct: 114 VVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESMERGSRVI 173
Query: 313 AILDKIKDENKKKVTNDESGEFADGSN 233
AILDKIK E + + S D N
Sbjct: 174 AILDKIKAEKGSEGGQEPSDLPEDDQN 200
>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
[Cucumis sativus] gi|449529960|ref|XP_004171965.1|
PREDICTED: probable ribosome-binding factor A,
chloroplastic-like [Cucumis sativus]
Length = 225
Score = 176 bits (446), Expect = 1e-41
Identities = 97/140 (69%), Positives = 106/140 (75%), Gaps = 5/140 (3%)
Frame = -2
Query: 667 IICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXX-----SA 503
I CMAN RR+KMVAKQI+RELSDMLLTDKVLQ+A SA
Sbjct: 57 IRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDVEVSA 116
Query: 502 DLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESLERGS 323
DLQVVKVYVSVFGDERGK+VA+AGLKSKAKYVR LGKRMKLRLTPE+RF+EDES ERGS
Sbjct: 117 DLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGS 176
Query: 322 RVIAILDKIKDENKKKVTND 263
RVIAILD+IKD+ K V D
Sbjct: 177 RVIAILDRIKDKKKDTVDED 196
>ref|XP_006423529.1| hypothetical protein CICLE_v10029227mg [Citrus clementina]
gi|567861752|ref|XP_006423530.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525463|gb|ESR36769.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
gi|557525464|gb|ESR36770.1| hypothetical protein
CICLE_v10029227mg [Citrus clementina]
Length = 226
Score = 175 bits (444), Expect = 2e-41
Identities = 106/203 (52%), Positives = 129/203 (63%), Gaps = 16/203 (7%)
Frame = -2
Query: 841 FLMPHLLIHRSTITLPC---------LTAHSTQSFCRLDS--VGLRRPPPYRVITTTTCG 695
F HL H+S ++LP +T+ ++ ++ + + LRR P
Sbjct: 5 FSFNHLHTHQSFLSLPLHHHYPYLLPITSFNSATWAPKSTAAIHLRRSP----------- 53
Query: 694 GSINGVNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXX 515
+ + CMANPRRVKMVAKQI+RELSDMLLTDKVLQ+A
Sbjct: 54 -----TRKTVKCMANPRRVKMVAKQIQRELSDMLLTDKVLQFAVLPEAALGADRYLSSLT 108
Query: 514 XXS-----ADLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFL 350
S ADLQVVKVYVSVFGD+RGKEVA+AGLKSKAKYVR +LG+RMKLRLTPE+RF+
Sbjct: 109 TISDVEVSADLQVVKVYVSVFGDDRGKEVAIAGLKSKAKYVRSQLGRRMKLRLTPEIRFI 168
Query: 349 EDESLERGSRVIAILDKIKDENK 281
EDES ERGSRVIAILD+IK E +
Sbjct: 169 EDESFERGSRVIAILDRIKAEKE 191
>ref|XP_006284501.1| hypothetical protein CARUB_v10005701mg [Capsella rubella]
gi|482553206|gb|EOA17399.1| hypothetical protein
CARUB_v10005701mg [Capsella rubella]
Length = 219
Score = 174 bits (441), Expect = 4e-41
Identities = 96/136 (70%), Positives = 105/136 (77%), Gaps = 5/136 (3%)
Frame = -2
Query: 679 VNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXSA- 503
V R++ CMANPRRVKMVAKQI RELSDMLLTD VLQ+A S
Sbjct: 47 VRRSVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDV 106
Query: 502 ----DLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESL 335
DLQVVKVYVSVFGD+RGK+VA+AGLKSKAKYVR ELGKRMKLRLTPEVRF+EDES+
Sbjct: 107 EVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDESM 166
Query: 334 ERGSRVIAILDKIKDE 287
ERGSRVIAILDK+K E
Sbjct: 167 ERGSRVIAILDKLKAE 182
>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
Full=Probable ribosome-binding factor A, chloroplastic;
Flags: Precursor gi|25082957|gb|AAN72022.1| putative
protein [Arabidopsis thaliana]
gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
factor A [Arabidopsis thaliana]
Length = 215
Score = 173 bits (439), Expect = 6e-41
Identities = 96/136 (70%), Positives = 104/136 (76%), Gaps = 5/136 (3%)
Frame = -2
Query: 679 VNRAIICMANPRRVKMVAKQIRRELSDMLLTDKVLQYAXXXXXXXXXXXXXXXXXXXSA- 503
V R + CMANPRRVKMVAKQI RELSDMLLTD VLQ+A S
Sbjct: 47 VRRTVRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDV 106
Query: 502 ----DLQVVKVYVSVFGDERGKEVALAGLKSKAKYVRGELGKRMKLRLTPEVRFLEDESL 335
DLQVVKVYVSVFGD+RGK+VA+AGLKSKAKYVR ELGKRMKLRLTPEVRF+EDE++
Sbjct: 107 EVSNDLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAM 166
Query: 334 ERGSRVIAILDKIKDE 287
ERGSRVIAILDKIK E
Sbjct: 167 ERGSRVIAILDKIKAE 182