BLASTX nr result

ID: Rehmannia23_contig00005391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00005391
         (482 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249264.1| PREDICTED: 28S ribosomal protein S9, mitocho...    89   6e-16
ref|XP_006351315.1| PREDICTED: 37S ribosomal protein S9, mitocho...    85   9e-15
ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitocho...    56   4e-06

>ref|XP_004249264.1| PREDICTED: 28S ribosomal protein S9, mitochondrial-like [Solanum
           lycopersicum]
          Length = 385

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 63/153 (41%), Positives = 82/153 (53%)
 Frame = +3

Query: 21  MLSRFISKSSQFHRLLTLIPSQTHLVIPKPITRNPLFSNPTDHFSPKTPHFYFFSTKGEN 200
           MLSRFISKSS   RLLTLI  +TH + PKPI+  P             PHF  FST+  N
Sbjct: 1   MLSRFISKSSHL-RLLTLISPKTHFINPKPISPKPYLF----------PHF--FSTRNNN 47

Query: 201 GNSGDDSATSTTDLWKMSSEVDQDIDSVFSFESEKLEGIDNQNGDVMKNGDDNIGDLFGG 380
            N+  +   S  D WK+SSE +Q   SVF+ +SE +EGI          G D++   +G 
Sbjct: 48  NNNNSNGRNSDPDFWKLSSETEQ---SVFNEDSESVEGI----------GKDDVS--WGN 92

Query: 381 VDRKDGNSGDSEIFSGVVENRAGGGNAEWATGE 479
           V+ +   SGD    +G V++  GGG   WAT E
Sbjct: 93  VEEE---SGDVFKEAGEVKDGVGGGEEIWATAE 122


>ref|XP_006351315.1| PREDICTED: 37S ribosomal protein S9, mitochondrial-like [Solanum
           tuberosum]
          Length = 386

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 61/154 (39%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
 Frame = +3

Query: 21  MLSRFISKSSQFHRLLTLIPSQTHLVIPKPITRNPLFSNPTDHFSPKTPHFYFFSTKGEN 200
           MLSRFISKSS   RLLTLI  +TH + PKPI+  P             PHF  FST+  N
Sbjct: 1   MLSRFISKSSHL-RLLTLISPKTHFINPKPISPKPYLF----------PHF--FSTRNNN 47

Query: 201 GNSGDDSA-TSTTDLWKMSSEVDQDIDSVFSFESEKLEGIDNQNGDVMKNGDDNIGDLFG 377
            N+ + +   S  D WK+SSE +Q   SVF+ +SE +EGI   +     NG++  GD+F 
Sbjct: 48  NNNNNSNGRNSDPDFWKLSSETEQ---SVFNEDSESVEGIGKDDVS-WANGEEESGDVFK 103

Query: 378 GVDRKDGNSGDSEIFSGVVENRAGGGNAEWATGE 479
                          +G V+   GGG   WAT E
Sbjct: 104 E--------------AGEVKGGVGGGEEIWATAE 123


>ref|XP_004145895.1| PREDICTED: 28S ribosomal protein S9, mitochondrial-like [Cucumis
           sativus]
          Length = 405

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
 Frame = +3

Query: 63  LLTLIPSQTHLVIPKPITRNPLFSNPTDHFSPKTPHFYFFSTKGENGNSGDDSATS---T 233
           L  L+P  +H+ +   I+  P    P+    P+     FFST     N+ ++S +    T
Sbjct: 2   LSRLLPKPSHVRLLALISTKPPAQTPSFQLLPR-----FFSTNNNGSNNNNNSGSKDQPT 56

Query: 234 TDLWKMSSEVDQDIDSVFSFESEKLEGIDNQNGD--------VMKNGD-DNIGDLFGGVD 386
           +++WK+S E D++ D +F+ E++ L+GI  ++            K+GD D  GDLF  ++
Sbjct: 57  SNIWKISQENDENFDQLFTQEADNLDGIAEEDSAPRKDDSWVTSKSGDQDAEGDLFASLE 116

Query: 387 R-----KDGNSGDS-------EIFSGVVENRAGGGNAE 464
           +     KDG S D        +++S V E ++   N E
Sbjct: 117 KEVQGNKDGVSHDEWPMEKKFDVWSLVEEEKSDVFNIE 154


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