BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia23_contig00005363
         (1492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004241212.1| PREDICTED: transcription initiation factor I...   271   e-112
ref|XP_006350788.1| PREDICTED: transcription initiation factor I...   268   e-111
gb|EOY33953.1| Transcription initiation factor IIA subunit 1 [Th...   264   e-102
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu...   258   e-100
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   263   e-100
ref|XP_002298340.1| transcription factor IIA large subunit famil...   248   3e-97
ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241...   262   2e-96
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr...   267   2e-96
ref|XP_003537974.1| PREDICTED: transcription initiation factor I...   255   1e-95
ref|XP_004486980.1| PREDICTED: transcription initiation factor I...   258   1e-95
ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Popu...   236   1e-93
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   242   3e-92
gb|EMJ06530.1| hypothetical protein PRUPE_ppa006992mg [Prunus pe...   263   5e-92
ref|XP_004143132.1| PREDICTED: transcription initiation factor I...   245   4e-91
ref|XP_006595034.1| PREDICTED: transcription initiation factor I...   238   8e-91
ref|XP_003547006.1| PREDICTED: transcription initiation factor I...   233   4e-90
gb|ESW22350.1| hypothetical protein PHAVU_005G146700g [Phaseolus...   237   1e-89
ref|XP_003539601.1| PREDICTED: transcription initiation factor I...   240   3e-89
ref|XP_003597404.1| Transcription factor/ transcription initiati...   252   7e-89
gb|ESW22511.1| hypothetical protein PHAVU_005G159000g [Phaseolus...   240   2e-88

>ref|XP_004241212.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum lycopersicum]
          Length = 401

 Score =  271 bits (692), Expect(2) = e-112
 Identities = 146/226 (64%), Positives = 158/226 (69%), Gaps = 6/226 (2%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFFM-SSGKRKRDDIPPHY-AGGYI 844
            PS W+NQRPPLDVNVAYVEGREEG+RG   QP TQDFFM S+GKRKR+D PP Y  GGYI
Sbjct: 178  PSPWLNQRPPLDVNVAYVEGREEGDRGGSQQPMTQDFFMNSTGKRKREDFPPQYHNGGYI 237

Query: 845  PQQDGAGDIQSEELKVLQG-GVQEMFVQGGTLSS---RIPQLDGPIPDPYDDVLSTPNIY 1012
            PQQDGA D   + +K  +G  +Q   V  G + +   RIPQ DGPIPD YDD LSTPNIY
Sbjct: 238  PQQDGAADSIYDNIKSGEGSNIQLELVTVGPVQAPAYRIPQFDGPIPDSYDDALSTPNIY 297

Query: 1013 NYQGVVNEDYNIVNTPVPNEMLAATPAPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1192
             YQGVVNEDYNIVNTP PN+M A TPAP+Q                              
Sbjct: 298  -YQGVVNEDYNIVNTPAPNDMQAPTPAPLQ-NDDIDDDDEPLNEDDDDELDDVDQGEDLN 355

Query: 1193 TTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
            T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 356  TAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 401



 Score =  163 bits (412), Expect(2) = e-112
 Identities = 88/145 (60%), Positives = 98/145 (67%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGE +L ELQ LWE+KMM AGAILG I+R+
Sbjct: 1   MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  KA  GGPIT  PVHDLN+            AD                   AQTPLP
Sbjct: 61  SAAKATPGGPIT--PVHDLNMPYEGNEEYETPTAD----ILFPPTPLQTPLPGTAQTPLP 114

Query: 522 GTAQTPLPGTAQTPLTGSDSGSLYN 596
           GT QTPLPGTAQTPL G+   S+YN
Sbjct: 115 GTVQTPLPGTAQTPLPGTADSSMYN 139


>ref|XP_006350788.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Solanum tuberosum]
          Length = 403

 Score =  268 bits (685), Expect(2) = e-111
 Identities = 146/227 (64%), Positives = 156/227 (68%), Gaps = 7/227 (3%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREE-GERGAPHQPTTQDFFMSS-GKRKRDDIPPHYA-GGY 841
            PS W+NQRPPLDVNVAYVEGREE G+RG   QP TQDFFM+S GKRKR+D PP Y  GGY
Sbjct: 178  PSPWLNQRPPLDVNVAYVEGREEVGDRGGSQQPMTQDFFMNSAGKRKREDFPPQYHNGGY 237

Query: 842  IPQQDGAGDIQSEELKVLQGG-VQEMFVQGGTLSS---RIPQLDGPIPDPYDDVLSTPNI 1009
            IPQQDGA D   + LK  +G  +Q   V  G + +   RIPQ DGPIPD YDD LSTPNI
Sbjct: 238  IPQQDGAADSIYDNLKSGEGSNIQLELVTVGPVQASAYRIPQFDGPIPDSYDDALSTPNI 297

Query: 1010 YNYQGVVNEDYNIVNTPVPNEMLAATPAPVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1189
            Y YQGVVNEDYNIVNTP PN+M A TPAP                               
Sbjct: 298  Y-YQGVVNEDYNIVNTPAPNDMQAPTPAPALQNDDIDDDDEPLNEDDDDDLDDVDQGEDL 356

Query: 1190 XTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
             T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 357  NTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKANGEFDF 403



 Score =  163 bits (412), Expect(2) = e-111
 Identities = 88/145 (60%), Positives = 98/145 (67%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASSTTSNVYIHVIEDVI+KVR+EFINNGGPGE +L ELQ LWE+KMM AGAILG I+R+
Sbjct: 1   MASSTTSNVYIHVIEDVISKVRDEFINNGGPGESILKELQALWEVKMMNAGAILGTIERN 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  KA  GGPIT  PVHDLN+            AD                   AQTPLP
Sbjct: 61  SAAKATPGGPIT--PVHDLNMPYEGNEEYETPTAD----ILFPPTPLQTPLPGTAQTPLP 114

Query: 522 GTAQTPLPGTAQTPLTGSDSGSLYN 596
           GT QTPLPGTAQTPL G+   S+YN
Sbjct: 115 GTVQTPLPGTAQTPLPGTADSSMYN 139


>gb|EOY33953.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  264 bits (674), Expect(2) = e-102
 Identities = 146/241 (60%), Positives = 155/241 (64%), Gaps = 21/241 (8%)
 Frame = +2

Query: 671  PSSWMNQRPPL--DVNVAYVEGREEGERGAPHQPTTQDFFM-SSGKRKRDDIPPHY--AG 835
            PS W NQR PL  DVNVAYVEGR+E +RG  HQP TQDFFM SSGKRKR+D    Y   G
Sbjct: 153  PSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDFTTQYHNGG 212

Query: 836  GYIPQQDGAGDIQSEELKV--------------LQGGVQEMFVQGGTLSSRIPQLDGPIP 973
            GYIPQQDGAGD   E  K                     E+       SS+IPQLDGPIP
Sbjct: 213  GYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKIPQLDGPIP 272

Query: 974  DPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV--QXXXXXXXXXXXXXXX 1147
            DPYDD+LSTPNIYNYQGVVNEDYN+VNTP PN++ AATPAPV                  
Sbjct: 273  DPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDEPLNEDD 332

Query: 1148 XXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 1327
                           T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD
Sbjct: 333  DDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 392

Query: 1328 F 1330
            F
Sbjct: 393  F 393



 Score =  136 bits (343), Expect(2) = e-102
 Identities = 83/146 (56%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASSTTS VYIHVIEDVINKVR+EFINNGGPGE VLNELQG+WE+KMMQAG + GPI+RS
Sbjct: 1   MASSTTSAVYIHVIEDVINKVRDEFINNGGPGETVLNELQGIWEMKMMQAGVVCGPIERS 60

Query: 342 ATQKAGA-GGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPL 518
           + QK    GGPIT  PVHDLNV            AD                     TPL
Sbjct: 61  SGQKQPTPGGPIT--PVHDLNVPYEGPEEYETPTAD----------------MLFPPTPL 102

Query: 519 PGTAQTPLPGTAQTPLTGSDSGSLYN 596
               QTP+P    TPL GS  GS+YN
Sbjct: 103 ----QTPVP----TPLPGSADGSMYN 120


>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348134|gb|ERP66111.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 405

 Score =  258 bits (658), Expect(2) = e-100
 Identities = 137/236 (58%), Positives = 155/236 (65%), Gaps = 16/236 (6%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFFMSSGKRKRDDIPPHYA-GGYIP 847
            PS  M+QRPPLDVNVAYVEGR+E +RG  HQ  TQDFFMSSGKRKR D  P Y  GG+IP
Sbjct: 170  PSPLMHQRPPLDVNVAYVEGRDEVDRGGSHQTLTQDFFMSSGKRKRGDFAPKYNNGGFIP 229

Query: 848  QQDGAGDIQSEELKVLQGGV------------QEMFVQGGTLSSRIPQLDGPIPDPYDDV 991
            QQDGA D  SE  +V QG              +E+  +      +IPQ+DGPIPDPYDD+
Sbjct: 230  QQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQVDGPIPDPYDDM 289

Query: 992  LSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXXXXXXXXXXXXXX 1162
            LSTPNIYNYQGV NEDYNI NTP PN++ A+TPA V                        
Sbjct: 290  LSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDDDEDL 349

Query: 1163 XXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                      T HL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILFNKATGEF+F
Sbjct: 350  DGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATGEFEF 405



 Score =  136 bits (342), Expect(2) = e-100
 Identities = 79/146 (54%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASS TS VY  VIEDVI+KVR+EFINNGGPGE VL+ELQGLWE K+MQAG + GPI RS
Sbjct: 1   MASSATSTVYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIVRS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  K    G +T  PVHDLNV            A+                   AQTPLP
Sbjct: 61  SANKQLVPGGLT--PVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQTPLP 110

Query: 522 GTAQTPLPGTAQTPLTGS-DSGSLYN 596
           G  QTPLPG   TPL GS D+ S+YN
Sbjct: 111 GNVQTPLPGNVPTPLPGSVDNSSMYN 136


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  263 bits (673), Expect(2) = e-100
 Identities = 142/231 (61%), Positives = 158/231 (68%), Gaps = 11/231 (4%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFFM-SSGKRKRDDIPPHYA-GGYI 844
            PS W+NQRPPLDVN+AYVEGREE +RG  +QP TQDFF  +SGKRKR+D    Y  GG+I
Sbjct: 155  PSPWINQRPPLDVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKREDFAAQYNNGGFI 214

Query: 845  PQQDGAGDIQSEELKVLQGGVQEMFVQGGTLSS------RIPQLDGPIPDPYDDVLSTPN 1006
            PQQDGAGD   E L+V +  V    ++   LSS      +IPQLDGPIPDPYDDVLSTPN
Sbjct: 215  PQQDGAGDTPFEVLQVERDTVISADIE--ILSSVTRRGLKIPQLDGPIPDPYDDVLSTPN 272

Query: 1007 IYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXXXXXXXXXXXXXXXXXXX 1177
            IYNYQGV NEDYNI NTP PN++ A+TPA +                             
Sbjct: 273  IYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDDDDDDDLDDVDQ 332

Query: 1178 XXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                 T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 333  GEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 383



 Score =  129 bits (325), Expect(2) = e-100
 Identities = 77/143 (53%), Positives = 87/143 (60%)
 Frame = +3

Query: 168 SSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRSAT 347
           S+TTS VYIHVIEDV+NKVR+EFINNG PGE VLNELQ +WELKMMQAG I GPI+RS+ 
Sbjct: 5   STTTSTVYIHVIEDVVNKVRDEFINNG-PGETVLNELQAIWELKMMQAGVICGPIERSSG 63

Query: 348 QKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLPGT 527
            K   GG IT  PVHDLNV            A+                     TPLPGT
Sbjct: 64  AKTVPGGVIT--PVHDLNVPYEGTEEYETPTAE----------------ILFPPTPLPGT 105

Query: 528 AQTPLPGTAQTPLTGSDSGSLYN 596
           AQTPLPG+        D+ S+YN
Sbjct: 106 AQTPLPGSV-------DNSSMYN 121


>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
            trichocarpa] gi|222845598|gb|EEE83145.1| transcription
            factor IIA large subunit family protein [Populus
            trichocarpa]
          Length = 409

 Score =  248 bits (633), Expect(2) = 3e-97
 Identities = 135/240 (56%), Positives = 153/240 (63%), Gaps = 20/240 (8%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNV------------AYVEGREEGERGAPHQPTTQDFFMSSGKRKRDD 814
            PS  M+QRPPLDVNV            AYVEGR+E +RG  HQ  TQDFFMSSGKRKR D
Sbjct: 170  PSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFFMSSGKRKRGD 229

Query: 815  IPPHYA-GGYIPQQDGAGDIQSE----ELKVLQGGVQEMFVQGGTLSSRIPQLDGPIPDP 979
              P Y  GG+IPQQDGA D  SE    E   +    +E+  +      +IPQ+DGPIPDP
Sbjct: 230  FAPKYNNGGFIPQQDGAVDSASEVSQVECDTITTKNREILARVSRSYVKIPQVDGPIPDP 289

Query: 980  YDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXXXXXXXXXX 1150
            YDD+LSTPNIYNYQGV NEDYNI NTP PN++ A+TPA V                    
Sbjct: 290  YDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDEPLNEDDDD 349

Query: 1151 XXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                          T HL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILFNKATGEF+F
Sbjct: 350  DEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFNKATGEFEF 409



 Score =  136 bits (342), Expect(2) = 3e-97
 Identities = 79/146 (54%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASS TS VY  VIEDVI+KVR+EFINNGGPGE VL+ELQGLWE K+MQAG + GPI RS
Sbjct: 1   MASSATSTVYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIVRS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  K    G +T  PVHDLNV            A+                   AQTPLP
Sbjct: 61  SANKQLVPGGLT--PVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQTPLP 110

Query: 522 GTAQTPLPGTAQTPLTGS-DSGSLYN 596
           G  QTPLPG   TPL GS D+ S+YN
Sbjct: 111 GNVQTPLPGNVPTPLPGSVDNSSMYN 136


>ref|XP_002282322.1| PREDICTED: uncharacterized protein LOC100241598 [Vitis vinifera]
            gi|297746029|emb|CBI16085.3| unnamed protein product
            [Vitis vinifera]
          Length = 393

 Score =  262 bits (670), Expect(2) = 2e-96
 Identities = 147/240 (61%), Positives = 158/240 (65%), Gaps = 20/240 (8%)
 Frame = +2

Query: 671  PSSWMNQRPPL--DVNVAYVEGREEGERGAPHQPTTQDFFM-SSGKRKRDDIPPHY-AGG 838
            PS WM QRPPL  DVNVAYVEGR+EG+RG   QP TQDFFM SSGKRKR+D P  Y   G
Sbjct: 154  PSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFPSQYHTSG 213

Query: 839  YIPQQDGAGDIQSE--ELKVLQGGV------------QEMFVQGGTLSSRIPQLDGPIPD 976
            YIPQQDGAGD   E  E++V QG              +E+F Q      RIPQLDGPIPD
Sbjct: 214  YIPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIPQLDGPIPD 273

Query: 977  PYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAP--VQXXXXXXXXXXXXXXXX 1150
            PY+DVLSTPNIYNYQGVVNEDYNIVNTP PN++ A TPA                     
Sbjct: 274  PYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDDEPPLNEND 333

Query: 1151 XXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                          T HLVLAQFDKVTRTKS+WKCTLKDGIMHINNKDILFNKA GEFDF
Sbjct: 334  DDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFNKANGEFDF 393



 Score =  119 bits (298), Expect(2) = 2e-96
 Identities = 68/143 (47%), Positives = 81/143 (56%)
 Frame = +3

Query: 168 SSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRSAT 347
           SS TS VY+ VIEDVINKVR+EF+NNGGPGE VL+ELQG+WE+KM+QAG + GPI+RS  
Sbjct: 4   SSMTSTVYVSVIEDVINKVRDEFVNNGGPGESVLSELQGIWEMKMVQAGVVTGPIERSTA 63

Query: 348 QKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLPGT 527
            K  +G P    PVHDLNV            A+                     TPL   
Sbjct: 64  PKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAE----------------ILFPPTPL--- 104

Query: 528 AQTPLPGTAQTPLTGSDSGSLYN 596
            QTP+    QTPL G    S+YN
Sbjct: 105 -QTPI----QTPLPGMGDNSMYN 122


>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
            gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
            initiation factor IIA subunit 1-like [Citrus sinensis]
            gi|557526833|gb|ESR38139.1| hypothetical protein
            CICLE_v10028561mg [Citrus clementina]
          Length = 406

 Score =  267 bits (683), Expect(2) = 2e-96
 Identities = 149/237 (62%), Positives = 162/237 (68%), Gaps = 17/237 (7%)
 Frame = +2

Query: 671  PSSWMNQRPPL--DVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHYA-GG 838
            PS WMN RPPL  DVNVAYVEGR+E +RG  HQP TQDFF MS+GKRKR+D P  Y  GG
Sbjct: 170  PSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYHNGG 229

Query: 839  Y-IPQQDGAGDIQSE--ELKVLQ---------GGVQEMFVQGGTLSSRIPQLDGPIPDPY 982
            Y IPQQDGAGD   E  EL+V +            +E+F    + S +IPQLDGPIPDPY
Sbjct: 230  YNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQLDGPIPDPY 289

Query: 983  DDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV-QXXXXXXXXXXXXXXXXXXX 1159
            DDVLSTPNIYNYQGVVNEDYNIVNTP PN++ A+TPA V Q                   
Sbjct: 290  DDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDEPLNENDDDE 349

Query: 1160 XXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                       T HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEFDF
Sbjct: 350  LDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFDF 406



 Score =  114 bits (284), Expect(2) = 2e-96
 Identities = 75/150 (50%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDR- 338
           MA+S T  VYI VIEDVI+KVR+EF+NNG PGE VLNELQG+WE+KM+QAG I   IDR 
Sbjct: 1   MATSATGMVYIRVIEDVISKVRDEFVNNG-PGESVLNELQGIWEMKMIQAGVI---IDRT 56

Query: 339 SATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPL 518
           SA ++   GGPIT  PVHDLNV            A+                    QTPL
Sbjct: 57  SAPKQPAPGGPIT--PVHDLNVPYEGTEEYETPTAE--------ILFPPTPLQTPIQTPL 106

Query: 519 PGTAQTPLPGT----AQTPLTGSDSGSLYN 596
           PG+  TPLPG+      TPL G+   S YN
Sbjct: 107 PGS--TPLPGSTPLPGSTPLPGTADNSTYN 134


>ref|XP_003537974.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoform X1 [Glycine max]
          Length = 392

 Score =  255 bits (652), Expect(2) = 1e-95
 Identities = 146/242 (60%), Positives = 161/242 (66%), Gaps = 22/242 (9%)
 Frame = +2

Query: 671  PSSW------MNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFFMSSGKRKRDDIPPHY- 829
            PS W       NQR PLDVNVAYVEGR+E ERGA +QP TQDFFMSSGKRKRD+I   Y 
Sbjct: 153  PSPWTNQNQNQNQRAPLDVNVAYVEGRDEAERGASNQPLTQDFFMSSGKRKRDEIASQYN 212

Query: 830  AGGYIPQQDGAGDIQSE--ELKVLQGGVQ----------EMFVQGGTLSSRIPQLDGPIP 973
            AGGYIPQQDGAGD  S+  E++V  GG+           +M  Q    +S+IPQLDGPIP
Sbjct: 213  AGGYIPQQDGAGDAASQILEIEVYGGGMSIDAGHSTSKGKMPAQSDRPASQIPQLDGPIP 272

Query: 974  DPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXXXXXXXX 1144
               DDVLSTPNIYNY GV NEDYNI NTP P+E+ A+TPAP+   +              
Sbjct: 273  YD-DDVLSTPNIYNY-GVFNEDYNIANTPAPSEVPASTPAPIAQNEVDEEDDDDEPPLNE 330

Query: 1145 XXXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 1324
                            T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF
Sbjct: 331  NDDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 390

Query: 1325 DF 1330
            DF
Sbjct: 391  DF 392



 Score =  123 bits (308), Expect(2) = 1e-95
 Identities = 69/141 (48%), Positives = 82/141 (58%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VI+DV+NKVR+EF+NNGGPG+ VL ELQ +WE KMMQAGAI+GPI+RS
Sbjct: 1   MAASTTSQVYIQVIDDVMNKVRDEFVNNGGPGDEVLKELQSIWESKMMQAGAIVGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
              K   GGPIT  PVHDLN+            A+                     TPL 
Sbjct: 61  GAPKPTPGGPIT--PVHDLNMPYEGTEEYETPTAE----------------MLFPPTPLQ 102

Query: 522 GTAQTPLPGTAQTPLTGSDSG 584
              QTPLPGT    +    +G
Sbjct: 103 TPLQTPLPGTVDNSMYNIPTG 123


>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cicer arietinum]
          Length = 389

 Score =  258 bits (659), Expect(2) = 1e-95
 Identities = 145/237 (61%), Positives = 160/237 (67%), Gaps = 17/237 (7%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS W+NQRPPLDVNVAYVEGREE +RGA +QP TQDFF M  GKRKR+D+PP Y AGGYI
Sbjct: 154  PSPWINQRPPLDVNVAYVEGREEADRGASNQPMTQDFFTMPGGKRKRNDLPPQYDAGGYI 213

Query: 845  PQQDGAGDIQSE--ELKVLQGGVQ----------EMFVQGGTLSSRIPQLDGPIPDPYDD 988
            PQQDG+GD  S   E++V  GG+           +M      L+SRIPQLDGPIP   DD
Sbjct: 214  PQQDGSGDAASGNFEIEVCGGGISINSQHTSFKGKMPADLERLASRIPQLDGPIPYE-DD 272

Query: 989  VLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXXXXXXXXXXXXX 1159
            VLSTPNIYNY GV +EDYNI NTP P E+ A+TPA V   +                   
Sbjct: 273  VLSTPNIYNYGGVYSEDYNIANTPAPPEVPASTPALVAQNEVANEDDDDEPPLNENDDDD 332

Query: 1160 XXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                       T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF
Sbjct: 333  MDDLDQGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 389



 Score =  120 bits (301), Expect(2) = 1e-95
 Identities = 72/142 (50%), Positives = 82/142 (57%), Gaps = 1/142 (0%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF NNGGPGE VL ELQ +WE KM+QAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFTNNGGPGEEVLRELQAIWESKMIQAGAVLGPIERS 60

Query: 342 A-TQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPL 518
           +   K   GGPIT  PVHDLNV            A+                     TPL
Sbjct: 61  SGANKPTPGGPIT--PVHDLNVPYEGTEEYETPTAE----------------ILFPPTPL 102

Query: 519 PGTAQTPLPGTAQTPLTGSDSG 584
               QTPLPGT  TP     +G
Sbjct: 103 QTPIQTPLPGTGDTPTYNIPTG 124


>ref|XP_006369541.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348133|gb|ERP66110.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 455

 Score =  236 bits (601), Expect(2) = 1e-93
 Identities = 131/241 (54%), Positives = 148/241 (61%), Gaps = 28/241 (11%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNV------------AYVEGREEGERGAPHQPTTQDFFMSSGKRKRDD 814
            PS  M+QRPPLDVNV            AYVEGR+E +RG  HQ  TQDFFMSSGKRKR D
Sbjct: 170  PSPLMHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQDFFMSSGKRKRGD 229

Query: 815  IPPHYA-GGYIPQQDGAGDIQSEELKVLQGGV------------QEMFVQGGTLSSRIPQ 955
              P Y  GG+IPQQDGA D  SE  +V QG              +E+  +      +IPQ
Sbjct: 230  FAPKYNNGGFIPQQDGAVDSASEVSQVSQGNNPHGRCDTITTKNREILARVSRSYVKIPQ 289

Query: 956  LDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV---QXXXXXXXX 1126
            +DGPIPDPYDD+LSTPNIYNYQGV NEDYNI NTP PN++ A+TPA V            
Sbjct: 290  VDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDVDDDDDE 349

Query: 1127 XXXXXXXXXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFN 1306
                                  T HL+LAQFDKVTRTKSRWKCTLKDG+MHINN+DILFN
Sbjct: 350  PLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINNRDILFN 409

Query: 1307 K 1309
            K
Sbjct: 410  K 410



 Score =  136 bits (342), Expect(2) = 1e-93
 Identities = 79/146 (54%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MASS TS VY  VIEDVI+KVR+EFINNGGPGE VL+ELQGLWE K+MQAG + GPI RS
Sbjct: 1   MASSATSTVYTEVIEDVIDKVRDEFINNGGPGETVLSELQGLWEKKLMQAGVLSGPIVRS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  K    G +T  PVHDLNV            A+                   AQTPLP
Sbjct: 61  SANKQLVPGGLT--PVHDLNVPYEGTEEYETPTAE--------ILFPPTPLPGSAQTPLP 110

Query: 522 GTAQTPLPGTAQTPLTGS-DSGSLYN 596
           G  QTPLPG   TPL GS D+ S+YN
Sbjct: 111 GNVQTPLPGNVPTPLPGSVDNSSMYN 136


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX1 [Glycine max]
          Length = 391

 Score =  242 bits (618), Expect(2) = 3e-92
 Identities = 137/240 (57%), Positives = 151/240 (62%), Gaps = 20/240 (8%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS WMNQRPPLDVNVAYVEGR+E +RG  +QP TQDFF M SGKRKR+D+   Y AGGYI
Sbjct: 152  PSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYI 211

Query: 845  PQQDGAGDIQSEELKVLQGGVQEMFVQGGTLS------------SRIPQLDGPIPDPYDD 988
            PQQDGAGD    + ++   G         T+S            SRIPQLDGPIP   DD
Sbjct: 212  PQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTSRIPQLDGPIPYDDDD 271

Query: 989  VLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV------QXXXXXXXXXXXXXXXX 1150
            VLSTPNIYNY  V +EDYNI NTP P E+ A+TPA +                       
Sbjct: 272  VLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDDDEPPLNEED 331

Query: 1151 XXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                          T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF+F
Sbjct: 332  DDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 391



 Score =  125 bits (313), Expect(2) = 3e-92
 Identities = 75/153 (49%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
              K   GGPIT  PVHDLNV            AD                     TPL 
Sbjct: 61  TAAKPTPGGPIT--PVHDLNVPYEGTDEYETPTAD----------------MLFPPTPLQ 102

Query: 522 GTAQTPLPGTAQT------------PLTGSDSG 584
              QTPLPGT               P +G+D+G
Sbjct: 103 TPIQTPLPGTGDNSTYNIPTGPSDYPSSGNDTG 135


>gb|EMJ06530.1| hypothetical protein PRUPE_ppa006992mg [Prunus persica]
          Length = 386

 Score =  263 bits (673), Expect(2) = 5e-92
 Identities = 139/233 (59%), Positives = 155/233 (66%), Gaps = 13/233 (5%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS WMN RPPLDVN+AYVEGR+E +RG  HQP TQDFF M+SGKRKR+D+   Y AGG+I
Sbjct: 154  PSPWMNHRPPLDVNIAYVEGRDEVDRGTSHQPPTQDFFQMNSGKRKREDLASQYPAGGFI 213

Query: 845  PQQDGAGDIQSEELKV-LQGG--------VQEMFVQGGTLSSRIPQLDGPIPDPYDDVLS 997
            PQQDGAGD   E  ++ + GG          EM       + +IPQLDGPIPDPYDD LS
Sbjct: 214  PQQDGAGDAAPEVFEIEVSGGSTSIGGRACSEMVTCALRSTPKIPQLDGPIPDPYDDALS 273

Query: 998  TPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV--QXXXXXXXXXXXXXXXXXXXXXXX 1171
            TPNIYNYQG  NEDYN+ NTP PN++  +TPAPV                          
Sbjct: 274  TPNIYNYQGTFNEDYNVANTPTPNDLPVSTPAPVVQNDVGDDDDDEPPLNENDDDDLDDV 333

Query: 1172 XXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                   T HLVLAQFDKVTRTKSRWKCTLKDGIM INNKDILFNKATGEFDF
Sbjct: 334  DQGEEVNTHHLVLAQFDKVTRTKSRWKCTLKDGIMRINNKDILFNKATGEFDF 386



 Score =  103 bits (256), Expect(2) = 5e-92
 Identities = 66/147 (44%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
 Frame = +3

Query: 168 SSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRSAT 347
           +++TS+VY+ VIEDVINKVREEF+N+G PGE VL ELQG WE KMMQAG +  PI+R+  
Sbjct: 2   ATSTSSVYVSVIEDVINKVREEFMNSG-PGEDVLKELQGTWEAKMMQAGVVNTPIERAVA 60

Query: 348 QKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLPGT 527
            K   G  IT  PVHDLNV            A+                     TPL   
Sbjct: 61  SKPTPGSAIT--PVHDLNVPYEGTEEYETPTAE----------------ILFPPTPLQTP 102

Query: 528 AQTPLPGTAQT----PLTGSDSGSLYN 596
            QTPLPGT       P  GSD  +  N
Sbjct: 103 IQTPLPGTGDNLYNIPTGGSDFSASAN 129


>ref|XP_004143132.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Cucumis sativus] gi|449496658|ref|XP_004160191.1|
            PREDICTED: transcription initiation factor IIA large
            subunit-like [Cucumis sativus]
          Length = 402

 Score =  245 bits (626), Expect(2) = 4e-91
 Identities = 138/243 (56%), Positives = 152/243 (62%), Gaps = 23/243 (9%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEG-ERGAP--HQPTTQDFFM-SSGKRKRDDIPPHY-AG 835
            P SWM QR P+DVN+AYVEGREE  +RGA   H   TQDFFM +SGKRKRDD    Y A 
Sbjct: 160  PPSWMGQRTPVDVNIAYVEGREEAADRGAAGAHPSLTQDFFMMNSGKRKRDDFASQYQAN 219

Query: 836  GYIPQQDGAGDIQSEELKVLQGGVQEMFVQGGTLSS--------------RIPQLDGPIP 973
            G+IPQQDGAGD  +   ++   G      + G ++S              +IPQLDGP+P
Sbjct: 220  GFIPQQDGAGDAANSVFEIEISGCNSSDGRPGAITSAKSATSSHIERSLLKIPQLDGPMP 279

Query: 974  DPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPVQ----XXXXXXXXXXXXX 1141
            DPYDDVLSTPNIYNYQGV NEDYNI NTP PN+  A TPA V                  
Sbjct: 280  DPYDDVLSTPNIYNYQGVFNEDYNIANTPAPNDPPAGTPAVVTQDDVNEEEEDSEPSLNE 339

Query: 1142 XXXXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 1321
                             T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE
Sbjct: 340  DDDDDDLDDVDQGEELSTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGE 399

Query: 1322 FDF 1330
            FDF
Sbjct: 400  FDF 402



 Score =  118 bits (296), Expect(2) = 4e-91
 Identities = 68/139 (48%), Positives = 83/139 (59%)
 Frame = +3

Query: 168 SSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRSAT 347
           +++TS++YI+VIEDVINK+R+EF++NG PGE VL ELQG+WE KMMQAGA+ GPI+RSA 
Sbjct: 2   ATSTSSIYINVIEDVINKLRDEFVDNG-PGEDVLKELQGMWEAKMMQAGAVTGPIERSAP 60

Query: 348 QKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLPGT 527
            K   GGPIT  PVHDLNV            AD                     TPL   
Sbjct: 61  SKPTPGGPIT--PVHDLNVPYEGTEEYETPTAD----------------LLFPPTPLQTP 102

Query: 528 AQTPLPGTAQTPLTGSDSG 584
            QTPLPGTA   +    +G
Sbjct: 103 IQTPLPGTADNAMYNVPTG 121


>ref|XP_006595034.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoform X2 [Glycine max]
          Length = 409

 Score =  238 bits (606), Expect(2) = 8e-91
 Identities = 138/258 (53%), Positives = 154/258 (59%), Gaps = 38/258 (14%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS WMNQRPPLDVNVAYVEGR+E +RG  +QP TQDFF M SGKRKR+D+   Y AGGYI
Sbjct: 152  PSPWMNQRPPLDVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTSQYNAGGYI 211

Query: 845  PQQDGAGDIQSEELKVLQGGVQE----------MFVQGGTLS------------------ 940
            PQQDGAGD    + ++    + +           FV G  +S                  
Sbjct: 212  PQQDGAGDATHGDFEIEVPPISQHHIYHQDVCISFVSGRGISINSHHTISKGKMSADLER 271

Query: 941  --SRIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV----- 1099
              SRIPQLDGPIP   DDVLSTPNIYNY  V +EDYNI NTP P E+ A+TPA +     
Sbjct: 272  STSRIPQLDGPIPYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEV 331

Query: 1100 -QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIM 1276
                                            T HLVLAQFDKVTRTKSRWKCTLKDGIM
Sbjct: 332  GNDFDDDDDDEPPLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIM 391

Query: 1277 HINNKDILFNKATGEFDF 1330
            HINNKDILFNKATGEF+F
Sbjct: 392  HINNKDILFNKATGEFEF 409



 Score =  125 bits (313), Expect(2) = 8e-91
 Identities = 75/153 (49%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
              K   GGPIT  PVHDLNV            AD                     TPL 
Sbjct: 61  TAAKPTPGGPIT--PVHDLNVPYEGTDEYETPTAD----------------MLFPPTPLQ 102

Query: 522 GTAQTPLPGTAQT------------PLTGSDSG 584
              QTPLPGT               P +G+D+G
Sbjct: 103 TPIQTPLPGTGDNSTYNIPTGPSDYPSSGNDTG 135


>ref|XP_003547006.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Glycine max]
          Length = 390

 Score =  233 bits (594), Expect(2) = 4e-90
 Identities = 134/239 (56%), Positives = 152/239 (63%), Gaps = 20/239 (8%)
 Frame = +2

Query: 674  SSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYIP 847
            S WMNQRPPLDVNVAYVEGR+E ++G  +QP TQDFF  +SGKRKR+D+   Y  GGYIP
Sbjct: 153  SPWMNQRPPLDVNVAYVEGRDEADKGTSNQPLTQDFFTRTSGKRKRNDLTSQYNVGGYIP 212

Query: 848  QQDGAGDIQSE--ELKVLQGGV----------QEMFVQGGTLSSRIPQLDGPIPDPYDDV 991
            QQDGAGD      E++V  GG+          ++M       +SRIPQLDGPIP   DDV
Sbjct: 213  QQDGAGDAAHGVFEIEVSGGGISINSHHTISKEKMSADLERSTSRIPQLDGPIPYD-DDV 271

Query: 992  LSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV------QXXXXXXXXXXXXXXXXX 1153
            LSTPNIYNY  V +EDYNI NTP P E+ A+TPA +                        
Sbjct: 272  LSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLAQNEVGNDFDDDDDDEPPLNEEDD 331

Query: 1154 XXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                         T HLVLAQFDKV RTKSRWKCTLKDGIMHINNKDILFNKATGEF+F
Sbjct: 332  DDLDDMEQGDDQNTHHLVLAQFDKVARTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 390



 Score =  127 bits (319), Expect(2) = 4e-90
 Identities = 76/153 (49%), Positives = 87/153 (56%), Gaps = 12/153 (7%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           +  KA  GGPIT  PVHDLNV            AD                     TPL 
Sbjct: 61  SAAKATPGGPIT--PVHDLNVPYEGTEEYETPTAD----------------MLFPPTPLQ 102

Query: 522 GTAQTPLPGTAQT------------PLTGSDSG 584
              QTPLPGT               P +G+D+G
Sbjct: 103 TPIQTPLPGTGDNSTYNIPTGANDYPSSGNDTG 135


>gb|ESW22350.1| hypothetical protein PHAVU_005G146700g [Phaseolus vulgaris]
          Length = 386

 Score =  237 bits (604), Expect(2) = 1e-89
 Identities = 139/246 (56%), Positives = 152/246 (61%), Gaps = 26/246 (10%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS WMN RPPLDVNVAYVEGR+E +RG  +QP TQDFF MSSGKRKR+D+   Y +GGYI
Sbjct: 150  PSPWMNPRPPLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLTSQYNSGGYI 209

Query: 845  PQQDGAGDIQSEELKVLQGGVQEMFVQGGTLS--------------------SRIPQLDG 964
            PQQDGAGD           GV E+ V GG +S                    SRIPQLDG
Sbjct: 210  PQQDGAGDAAL--------GVFEIEVNGGDISINSHHTISKAKVPADLERLTSRIPQLDG 261

Query: 965  PIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPVQ----XXXXXXXXXX 1132
            PIP   DD LSTPNIYNY  V +EDYNI NTP P E+ A+TPA V               
Sbjct: 262  PIPYE-DDALSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALVAQNEVGNDDDDDDEP 320

Query: 1133 XXXXXXXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 1312
                                T HLVLAQFDKV+RTKSRWKCTLKDGIMHINNKDILFNKA
Sbjct: 321  PLNEEDDDDLDDIEQGDDQNTHHLVLAQFDKVSRTKSRWKCTLKDGIMHINNKDILFNKA 380

Query: 1313 TGEFDF 1330
            TGEF+F
Sbjct: 381  TGEFEF 386



 Score =  122 bits (305), Expect(2) = 1e-89
 Identities = 71/145 (48%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
           A  K   GGPIT  PVHDLN+             +                    QTPLP
Sbjct: 61  AAAKPTPGGPIT--PVHDLNM----------PYTEEYETPTAEMLFPPTPLQTPIQTPLP 108

Query: 522 GTAQTPL----PGTAQTPLTGSDSG 584
           GT          G +  P +G+D+G
Sbjct: 109 GTGDNSTYNIPTGPSDYPSSGNDNG 133


>ref|XP_003539601.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX2 [Glycine max]
          Length = 389

 Score =  240 bits (613), Expect(2) = 3e-89
 Identities = 138/241 (57%), Positives = 155/241 (64%), Gaps = 21/241 (8%)
 Frame = +2

Query: 671  PSSW----MNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFFMSSGKRKRDDIPPHY-AG 835
            P  W     NQR PLDVNVAYVEGR+  ERGA +QP TQDFFMSSGKRKRD+I   Y AG
Sbjct: 151  PPPWTSQNQNQRAPLDVNVAYVEGRDAAERGASNQPLTQDFFMSSGKRKRDEIASQYNAG 210

Query: 836  GYIPQQDGAGDIQSE--ELKVLQGGVQ----------EMFVQGGTLSSRIPQLDGPIPDP 979
            GYIPQQDGAGD  S+  E++V  GG+           +M       +S+IPQ DGPIP  
Sbjct: 211  GYIPQQDGAGDADSQIFEIEVYGGGISIDAGHSTSNGKMPAHSDRPASQIPQFDGPIPYD 270

Query: 980  YDDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPVQ----XXXXXXXXXXXXXXX 1147
             DDV+STPN+YNY GV NEDYNI NTP  +++ A+TPAPV                    
Sbjct: 271  -DDVVSTPNMYNY-GVFNEDYNIANTPASSDVPASTPAPVAQNEVDEEDDDDDEPLNEND 328

Query: 1148 XXXXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 1327
                           T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF+
Sbjct: 329  DDDDLDDLDQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFE 388

Query: 1328 F 1330
            F
Sbjct: 389  F 389



 Score =  117 bits (292), Expect(2) = 3e-89
 Identities = 66/141 (46%), Positives = 81/141 (57%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+S+TS VYI VI+DV+ KVR+EF+NNGGPG+ VL ELQ +WE KM+QAGAI+GPI+RS
Sbjct: 1   MAASSTSQVYIQVIDDVMIKVRDEFVNNGGPGDEVLKELQSIWESKMLQAGAIVGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
              K   GGPIT  PVHDLN+            A+                     TPL 
Sbjct: 61  GAPKPTPGGPIT--PVHDLNMPYEGTEEYETPTAE----------------MLFPPTPLQ 102

Query: 522 GTAQTPLPGTAQTPLTGSDSG 584
              QTPLPGT    +    +G
Sbjct: 103 TPLQTPLPGTVDNSMYNIPTG 123


>ref|XP_003597404.1| Transcription factor/ transcription initiation factor [Medicago
            truncatula] gi|355486452|gb|AES67655.1| Transcription
            factor/ transcription initiation factor [Medicago
            truncatula] gi|388523053|gb|AFK49588.1| unknown [Medicago
            truncatula]
          Length = 388

 Score =  252 bits (643), Expect(2) = 7e-89
 Identities = 145/238 (60%), Positives = 158/238 (66%), Gaps = 18/238 (7%)
 Frame = +2

Query: 671  PSSWMN--QRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGG 838
            PS WMN  QRPPLDVNVAYVEGR+E +RGA +QP TQDFF M+ GKRKR+D+PP Y AGG
Sbjct: 152  PSPWMNMNQRPPLDVNVAYVEGRDEADRGASNQPMTQDFFTMTGGKRKRNDLPPPYDAGG 211

Query: 839  YIPQQDGAGDIQSE--ELKVLQGGVQ----------EMFVQGGTLSSRIPQLDGPIPDPY 982
            YIPQQDGAGD  S   E++V  G +           +M      L+SRIPQLDGPIP   
Sbjct: 212  YIPQQDGAGDAVSGDFEIEVCGGSISFNSQHTNSKGKMPADLERLASRIPQLDGPIPYE- 270

Query: 983  DDVLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPAPV--QXXXXXXXXXXXXXXXXXX 1156
            DDVLSTPNIYNY GV NEDYNI NTP P E+ A+TPA V                     
Sbjct: 271  DDVLSTPNIYNYGGVFNEDYNIANTPAPPEVPASTPALVAQNEAVNEDEDDEPLNEDDDD 330

Query: 1157 XXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                        T HLVLAQFDKVTRTKSRWKCTLKDGIMHIN KDILFNKATGEFDF
Sbjct: 331  DLDDLDQEDDQDTNHLVLAQFDKVTRTKSRWKCTLKDGIMHINKKDILFNKATGEFDF 388



 Score =  104 bits (259), Expect(2) = 7e-89
 Identities = 64/136 (47%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGG-PGEGVLNELQGLWELKMMQAGAILGPIDR 338
           MA+STTS VYI VIEDV+ KVR+EF+N G  PG+ VL ELQ +WE K +QAGA+LGPI+R
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNTGASPGDEVLRELQAIWESKCIQAGAVLGPIER 60

Query: 339 -SATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTP 515
            +   +   GGPIT  PVHDLNV            A+                     TP
Sbjct: 61  NTGVNRPMPGGPIT--PVHDLNVPYEGTEEYETPTAE----------------ILFPPTP 102

Query: 516 LPGTAQTPLPGTAQTP 563
           L    QTPLPG  +TP
Sbjct: 103 LQTPIQTPLPGPGETP 118


>gb|ESW22511.1| hypothetical protein PHAVU_005G159000g [Phaseolus vulgaris]
          Length = 385

 Score =  240 bits (612), Expect(2) = 2e-88
 Identities = 137/239 (57%), Positives = 155/239 (64%), Gaps = 19/239 (7%)
 Frame = +2

Query: 671  PSSWMNQRPPLDVNVAYVEGREEGERGAPHQPTTQDFF-MSSGKRKRDDIPPHY-AGGYI 844
            PS WMN RP LDVNVAYVEGR+E +RG  +QP TQDFF MSSGKRKR+D+P H+ AGGYI
Sbjct: 149  PSPWMNPRPSLDVNVAYVEGRDEADRGTSNQPLTQDFFTMSSGKRKRNDLPSHHNAGGYI 208

Query: 845  PQQDGAGD--IQSEELKVLQGGVQ----------EMFVQGGTLSSRIPQLDGPIPDPYDD 988
            PQQDGAGD  +   E++V  G +           +M      L++RIPQLDGPI  PYDD
Sbjct: 209  PQQDGAGDAALGVFEIEVNGGDISINSHHTISKGKMQADLERLTTRIPQLDGPI--PYDD 266

Query: 989  VLSTPNIYNYQGVVNEDYNIVNTPVPNEMLAATPA-----PVQXXXXXXXXXXXXXXXXX 1153
             LSTPNIYNY  V ++DYNI NTP P E+  +TPA      V                  
Sbjct: 267  ELSTPNIYNYGEVFSDDYNISNTPAPPEVPVSTPALLAQNEVGNDEDDDDDEPPLNEEDD 326

Query: 1154 XXXXXXXXXXXXXTTHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFDF 1330
                         T HLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF+F
Sbjct: 327  DELDDMEQGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFEF 385



 Score =  114 bits (286), Expect(2) = 2e-88
 Identities = 69/145 (47%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
 Frame = +3

Query: 162 MASSTTSNVYIHVIEDVINKVREEFINNGGPGEGVLNELQGLWELKMMQAGAILGPIDRS 341
           MA+STTS VYI VIEDV+ KVR+EF+NNGGPGE VL ELQ +WE KMMQAGA+LGPI+RS
Sbjct: 1   MAASTTSQVYIDVIEDVMVKVRDEFVNNGGPGEEVLKELQAMWESKMMQAGAVLGPIERS 60

Query: 342 ATQKAGAGGPITPNPVHDLNVXXXXXXXXXXXXADXXXXXXXXXXXXXXXXXXXAQTPLP 521
              K    GPIT  PVHDLN+             +                    QTPLP
Sbjct: 61  TAAKP-TPGPIT--PVHDLNM----------PYTEEYETPTAEMLFPPTPLQTPIQTPLP 107

Query: 522 GTAQTPL----PGTAQTPLTGSDSG 584
           GT          G ++ P +G+D+G
Sbjct: 108 GTGDNSTYNIPTGPSEYPSSGNDTG 132