BLASTX nr result
ID: Rehmannia23_contig00005225
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia23_contig00005225
(854 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 233 9e-59
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 232 1e-58
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 218 3e-54
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 218 3e-54
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 213 5e-53
ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF8... 209 1e-51
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 208 2e-51
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 208 2e-51
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 208 2e-51
gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 ... 207 3e-51
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I... 207 4e-51
gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subun... 207 5e-51
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 206 1e-50
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 204 3e-50
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 204 4e-50
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 203 7e-50
gb|ABK26380.1| unknown [Picea sitchensis] 202 1e-49
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 202 1e-49
gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao] 201 2e-49
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 201 4e-49
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 233 bits (593), Expect = 9e-59
Identities = 115/145 (79%), Positives = 128/145 (88%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LDINTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
L+GDPSIAA+FELDQK+F+L+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 232 bits (592), Expect = 1e-58
Identities = 114/145 (78%), Positives = 128/145 (88%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVETLFEDIF V DPDGKKFDRV+RI ARSEQFDM M LD+NTEIYPMR +KFMMVL
Sbjct: 1 MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
ASTLNLDGTPD+GY+ GN+KSLADKF+YVM GKLYRISEE K VKAD++VSFGGLLM
Sbjct: 61 ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
L+GDPSIAA+FELDQK+F+L+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 218 bits (554), Expect = 3e-54
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMRAG++F MVL
Sbjct: 251 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 310
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD+G+YT RK+LADKFDYVM GKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 311 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 370
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 371 MMLKGDPSSAASFELDQRLFLLIRKV 396
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 218 bits (554), Expect = 3e-54
Identities = 108/146 (73%), Positives = 123/146 (84%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMRAG++F MVL
Sbjct: 46 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVL 105
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD+G+YT RK+LADKFDYVM GKLY+ISE++ Q K ++Y SFGGLL
Sbjct: 106 APTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLL 165
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 166 MMLKGDPSSAASFELDQRLFLLIRKV 191
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 213 bits (543), Expect = 5e-53
Identities = 107/146 (73%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVE LFEDIF V LDPDGKKFDRVSRI ARSEQFDM M LD+ TE+YPMR G+KF MVL
Sbjct: 1 MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD G+YT RK+LADK+DYVM GKLY+ISE+ Q K ++Y SFGGLL
Sbjct: 61 APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
MMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146
>ref|NP_001147399.1| LOC100281008 [Zea mays] gi|194699730|gb|ACF83949.1| unknown [Zea
mays] gi|195607894|gb|ACG25777.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195608506|gb|ACG26083.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195611040|gb|ACG27350.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195649823|gb|ACG44379.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|195653495|gb|ACG46215.1| DNA-directed RNA
polymerases I, II, and III 17.1 kDa polypeptide [Zea
mays] gi|238014148|gb|ACR38109.1| unknown [Zea mays]
gi|413932441|gb|AFW66992.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 1 [Zea mays]
gi|413932442|gb|AFW66993.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 2 [Zea mays]
gi|413932443|gb|AFW66994.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 3 [Zea mays]
gi|413932444|gb|AFW66995.1| DNA-directed RNA polymerase
I, II, and III polypeptide isoform 4 [Zea mays]
Length = 146
Score = 209 bits (531), Expect = 1e-51
Identities = 102/146 (69%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFED F V LDPDGKKFDRVSR+ ARSEQ DM M LD+ T++YPM AGEKF MV+
Sbjct: 1 MSEHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD+GYYT RK+LAD ++YVMQGKLY+ISE+T Q K +MY SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
M+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 208 bits (530), Expect = 2e-51
Identities = 99/145 (68%), Positives = 119/145 (82%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFED F V LDPDGKKFD+VSR+ ARSEQ M M LD+ T++YP+RAGEKF MVL
Sbjct: 1 MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
A TLNLDGTPD+GYYT RK+LAD ++YVMQGKLY+ISE+T + K ++Y SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 208 bits (530), Expect = 2e-51
Identities = 99/141 (70%), Positives = 118/141 (83%)
Frame = -1
Query: 689 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVLASTL 510
LFEDIF VD LDPDGKKFD+VSRI A S+ DM MHLD+NTEIYPM G+KF M LA TL
Sbjct: 6 LFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTL 65
Query: 509 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLMMLKG 330
NLDGTPD+GYYT G RK+LADK++Y+M GKLY+ISEE K VKA+M VS+GGLLM+L+G
Sbjct: 66 NLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRG 125
Query: 329 DPSIAARFELDQKLFILLRKV 267
DPS + FELDQ+LF+L+RK+
Sbjct: 126 DPSHVSHFELDQRLFLLMRKL 146
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 208 bits (529), Expect = 2e-51
Identities = 103/151 (68%), Positives = 119/151 (78%), Gaps = 3/151 (1%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFEDIF V +DPDGKKFDRV+RI ARSEQ +M M LDI T++YPM G+KF MVL
Sbjct: 1 MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ---VKADMYVSFGG 351
A TLNLDGTPD+GYYT RK+LADK+DYVM GKLY+ISE+ K K ++Y SFGG
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120
Query: 350 LLMMLKGDPSIAARFELDQKLFILLRKV*KD 258
LLM+LKGDPS AA ELDQKLF+L+RKV KD
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKVCKD 151
>gb|ACG27451.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide
[Zea mays]
Length = 146
Score = 207 bits (528), Expect = 3e-51
Identities = 101/146 (69%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M + LFED F V LDPDGKKFDRVSR+ ARSEQ DM M LD+ T++YPM AGEKF MV+
Sbjct: 1 MSDHLFEDTFVVTRLDPDGKKFDRVSRVEARSEQLDMYMQLDVATDVYPMHAGEKFNMVI 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD+GYYT RK+LAD ++YVMQGKLY+ISE+T Q K +MY SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSSQNAKVEMYASFGGLL 120
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
M+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 MLLRGDPSTAASFELDQRLFLLIRKV 146
>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Cucumis sativus]
gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
[Cucumis sativus]
Length = 144
Score = 207 bits (527), Expect = 4e-51
Identities = 99/145 (68%), Positives = 125/145 (86%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVE LF+DIF+++ L+PDGKKFD+V+RI A+SE+FDM MHLDIN+EIYP++ GEKF M L
Sbjct: 1 MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
A TLNLDGTPD+GY+ GNRKSLAD+++YVMQGKL+RISE + KA++ SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISESSGHGG-KAEIDASFGGLLM 119
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
MLKGDPS ++FELDQ+LF+L+RKV
Sbjct: 120 MLKGDPSHCSKFELDQRLFLLIRKV 144
>gb|EXB86762.1| DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Morus
notabilis]
Length = 187
Score = 207 bits (526), Expect = 5e-51
Identities = 98/145 (67%), Positives = 122/145 (84%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFEDIF++D L+PDGKKFD+V+RI A+SE+FDM MHLD+ T++YPM GEKF M L
Sbjct: 1 MAEFLFEDIFKIDRLNPDGKKFDKVTRIEAKSEKFDMFMHLDVGTDVYPMNEGEKFSMAL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
+STLN DGTPD+GYYTPGNRK+LAD ++YVMQGKLYRI+E + KA++ SFGGLLM
Sbjct: 61 SSTLNEDGTPDTGYYTPGNRKTLADNYEYVMQGKLYRIAEGSGH-HGKAEIDASFGGLLM 119
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
MLKGDPS ++ELDQ+LF+L+RKV
Sbjct: 120 MLKGDPSYFKKYELDQRLFLLIRKV 144
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 206 bits (523), Expect = 1e-50
Identities = 101/145 (69%), Positives = 118/145 (81%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M TLF DIF+V +DPDGKKFD+VSRI A+SEQ DM M LD+NTEIYPM AGEKF M L
Sbjct: 1 MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
ASTL+LDGTPD+GYYT RKSLADKF+YVM GKLY+ISEE VK +YVSFGGLLM
Sbjct: 61 ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
ML GDP+ A+ +LDQ++F+L+RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 204 bits (519), Expect = 3e-50
Identities = 94/141 (66%), Positives = 119/141 (84%)
Frame = -1
Query: 689 LFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVLASTL 510
LFEDIF V+ +DPDGKKFD+VSRI A S+ DM M LD+N+E+YPMR G+KF M LA TL
Sbjct: 6 LFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTL 65
Query: 509 NLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLMMLKG 330
NLDGTPD+GYYTPG RK+LADK++Y+M GKL++I +E K +KA++YVS+GGLLMMLKG
Sbjct: 66 NLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKG 125
Query: 329 DPSIAARFELDQKLFILLRKV 267
DPS + FELDQ+LF+L+RK+
Sbjct: 126 DPSYVSHFELDQRLFLLMRKL 146
>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 146
Score = 204 bits (518), Expect = 4e-50
Identities = 101/146 (69%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFEDIF V+ +DPDGKKFDRV+RI ARSEQF M M LD+ T +YPM AG+KF MVL
Sbjct: 1 MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQ-VKADMYVSFGGLL 345
A TLNLDGTPD+GYYT RK+LADK+DYVM GKLY+ISE++ Q K + Y SFGGLL
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120
Query: 344 MMLKGDPSIAARFELDQKLFILLRKV 267
M+LKGDPS AA ELDQ+LF+L+RKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 203 bits (516), Expect = 7e-50
Identities = 97/145 (66%), Positives = 117/145 (80%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFED F V+ LDPDGKKFDRVSR+ ARSEQ M M LD+ T++YPM+ EKF MVL
Sbjct: 1 MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
A TLNLDGTPD+GYYT RK+LAD ++YVM GKLY+ISE+T + K ++Y SFGGLLM
Sbjct: 61 APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
+L+GDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 202 bits (515), Expect = 1e-49
Identities = 98/145 (67%), Positives = 116/145 (80%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
MVE LFEDIF V +DPDGKKFD+VSRI ARSEQFDM M LD+N ++YP+ GEKF + L
Sbjct: 1 MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLM 342
A TLNLDGTPD+GY+ G RKSLADK++YVM GKLY +SEE VK ++ SFGGLLM
Sbjct: 61 APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120
Query: 341 MLKGDPSIAARFELDQKLFILLRKV 267
+LKGDPS A FELDQ+LF+L+RKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 202 bits (514), Expect = 1e-49
Identities = 99/147 (67%), Positives = 118/147 (80%), Gaps = 2/147 (1%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFEDIF V LDPDGKKFDRVSRI AR+EQ ++ M LD+ T++YPM G+KF MVL
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISE--ETREKQVKADMYVSFGGL 348
TLNLDGTPD+G++T RK+LADK++YVM GKLY+ISE ET + K +MY SFGGL
Sbjct: 61 VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120
Query: 347 LMMLKGDPSIAARFELDQKLFILLRKV 267
LMMLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147
>gb|EOY13785.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
Length = 145
Score = 201 bits (512), Expect = 2e-49
Identities = 95/140 (67%), Positives = 120/140 (85%)
Frame = -1
Query: 686 FEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVLASTLN 507
FEDIF VD LDPDGKKFD+V+RI ARS+ DM MHLD+N+EIYPM G+KF M LA TLN
Sbjct: 7 FEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLN 66
Query: 506 LDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEETREKQVKADMYVSFGGLLMMLKGD 327
LDGTPD+GYYTPG RKSLADK++YVM GKLY++S++ K +KA++YVS+GGLLMML+G+
Sbjct: 67 LDGTPDTGYYTPG-RKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGE 125
Query: 326 PSIAARFELDQKLFILLRKV 267
S ++FELDQ+LF+L+RK+
Sbjct: 126 ASHVSQFELDQRLFLLMRKL 145
>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
gi|29244685|gb|AAO73277.1| putative RNA polymerase
[Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
putative RNA polymerase [Oryza sativa Japonica Group]
gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
protein, expressed [Oryza sativa Japonica Group]
gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
protein OsJ_13351 [Oryza sativa Japonica Group]
gi|215692970|dbj|BAG88390.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 148
Score = 201 bits (510), Expect = 4e-49
Identities = 98/148 (66%), Positives = 118/148 (79%), Gaps = 3/148 (2%)
Frame = -1
Query: 701 MVETLFEDIFRVDTLDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL 522
M E LFEDIF V LDPDGKKFDRVSRI ARS+QFDM M LD+ T++YPM G++F MVL
Sbjct: 1 MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60
Query: 521 ASTLNLDGTPDSGYYTPGNRKSLADKFDYVMQGKLYRISEE---TREKQVKADMYVSFGG 351
TLNLDGTPDS ++T RK+LADK++YVM GKLY+ISE+ + + K +MY SFGG
Sbjct: 61 VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120
Query: 350 LLMMLKGDPSIAARFELDQKLFILLRKV 267
LL+MLKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148